Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for fgf4

Gene Name Gene ID Reads Annotation
fgf4 ENSDARG00000105230 407 fibroblast growth factor 4 [Source:ZFIN;Acc:ZDB-GENE-001006-1]










Genes with expression patterns similar to fgf4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. fgf4 ENSDARG00000105230 407 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 fibroblast growth factor 4 [Source:ZFIN;Acc:ZDB-GENE-001006-1]
2. alpk3a ENSDARG00000078989 1992 2.406 - 0.822 - - - - 0.756 0.828 - alpha-kinase 3a [Source:ZFIN;Acc:ZDB-GENE-050419-48]
3. myoz2b ENSDARG00000037266 2139 2.333 0.774 0.772 - - - - 0.787 - - myozenin 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1853]
4. vwde ENSDARG00000103443 5758 2.313 0.726 0.844 - - - - 0.743 - - von Willebrand factor D and EGF domains [Source:ZFIN;Acc:ZDB-GENE-060929-1226]
5. CU633479.5 ENSDARG00000114818 1815 2.229 0.724 0.738 - - - - 0.767 - -
6. fitm1 ENSDARG00000056464 1759 2.221 0.703 0.747 - - - 0.771 - - - fat storage-inducing transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-050306-28]
7. jph1a ENSDARG00000058603 2852 2.22 - 0.787 - - - 0.700 0.733 - - junctophilin 1a [Source:ZFIN;Acc:ZDB-GENE-040724-233]
8. obsl1b ENSDARG00000077388 2511 2.194 0.703 - - - - 0.701 0.790 - - obscurin-like 1b [Source:ZFIN;Acc:ZDB-GENE-050809-29]
9. zgc:173726 ENSDARG00000077078 250 1.667 - - - - - 0.797 - 0.870 - zgc:173726 [Source:ZFIN;Acc:ZDB-GENE-071004-108]
10. TMPO TMPO 3264 1.63 0.833 0.797 - - - - - - -
11. six2b ENSDARG00000054878 567 1.617 0.830 - - - - - 0.787 - - SIX homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-080723-23]
12. atp8b1 ENSDARG00000060980 181 1.616 - - - - - - 0.840 0.776 - ATPase phospholipid transporting 8B1 [Source:ZFIN;Acc:ZDB-GENE-091116-14]
13. mtx1b ENSDARG00000036109 445 1.563 0.722 - - - - - - 0.841 - metaxin 1b [Source:ZFIN;Acc:ZDB-GENE-021210-1]
14. zgc:153662 zgc:153662 4604 1.553 - 0.734 - - - - 0.819 - -
15. armc4 ENSDARG00000055128 220 1.542 - 0.788 - - - 0.754 - - - armadillo repeat containing 4 [Source:ZFIN;Acc:ZDB-GENE-100316-7]
16. GPANK1 ENSDARG00000053995 1535 1.539 0.785 0.754 - - - - - - - G patch domain and ankyrin repeats 1 [Source:ZFIN;Acc:ZDB-GENE-070928-32]
17. sms ENSDARG00000008155 1192 1.533 0.778 - - - - - 0.755 - - spermine synthase [Source:ZFIN;Acc:ZDB-GENE-040625-150]
18. tnnt2d ENSDARG00000002988 7590 1.526 - 0.735 - - - - 0.791 - - troponin T2d, cardiac [Source:ZFIN;Acc:ZDB-GENE-050626-97]
19. crip2 ENSDARG00000070670 4844 1.522 - - - - - 0.734 0.788 - - cysteine-rich protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2889]
20. ptrfa ptrfa 4363 1.522 - 0.760 - - - 0.762 - - -
21. tnnc1b ENSDARG00000037539 13945 1.518 - 0.770 - - - - 0.748 - - troponin C type 1b (slow) [Source:ZFIN;Acc:ZDB-GENE-040625-62]
22. ablim2 ENSDARG00000055223 1934 1.515 - - - - - 0.732 0.783 - - actin binding LIM protein family, member 2 [Source:ZFIN;Acc:ZDB-GENE-100316-5]
23. lgr6 181 1.512 0.730 - - - - - 0.782 - - leucine rich repeat containing G protein-coupled receptor 6
24. abcb10 ENSDARG00000061591 253 1.508 - 0.796 - - - 0.712 - - - ATP-binding cassette, sub-family B (MDR/TAP), member 10 [Source:ZFIN;Acc:ZDB-GENE-040525-2]
25. RPTOR ENSDARG00000098726, ENSDARG00000116019 420 1.498 - 0.755 - - - 0.743 - - - regulatory associated protein of MTOR, complex 1 [Source:ZFIN;Acc:ZDB-GENE-130530-685]
26. MYOM1 MYOM1 3870 1.491 - 0.784 - - - - 0.707 - -
27. peli1a ENSDARG00000091592 119 1.491 0.734 - - - - 0.757 - - - pellino E3 ubiquitin protein ligase 1a [Source:ZFIN;Acc:ZDB-GENE-110310-6]
28. CU638714.1 ENSDARG00000100303 2132 1.49 - 0.763 - - - - 0.727 - -
29. sptb ENSDARG00000030490 7128 1.49 - 0.754 - - - - 0.736 - - spectrin, beta, erythrocytic [Source:ZFIN;Acc:ZDB-GENE-000906-1]
30. C13H10orf71 3489 1.488 0.728 - - - - - 0.760 - - chromosome 13 C10orf71 homolog
31. clic5a ENSDARG00000075993, ENSDARG00000115073 607 1.488 0.701 - - - - - 0.787 - - chloride intracellular channel 5a [Source:ZFIN;Acc:ZDB-GENE-041114-84]
32. IGSF10 ENSDARG00000077497 317 1.488 - - - - - 0.701 0.787 - - immunoglobulin superfamily, member 10 [Source:ZFIN;Acc:ZDB-GENE-130530-827]
33. txlnbb ENSDARG00000076241 6396 1.487 - 0.767 - - - 0.720 - - - taxilin beta b [Source:ZFIN;Acc:ZDB-GENE-070424-77]
34. twistnb ENSDARG00000024416 1077 1.484 0.732 0.752 - - - - - - - TWIST neighbor [Source:ZFIN;Acc:ZDB-GENE-041007-3]
35. chrnd ENSDARG00000019342 2728 1.482 - 0.709 - - - - 0.773 - - cholinergic receptor, nicotinic, delta (muscle) [Source:ZFIN;Acc:ZDB-GENE-030131-6665]
36. mef2cb ENSDARG00000009418 1124 1.48 - 0.763 - - - - - 0.717 - myocyte enhancer factor 2cb [Source:ZFIN;Acc:ZDB-GENE-040901-7]
37. meox1 ENSDARG00000007891, ENSDARG00000115382 1584 1.478 - 0.707 - - - 0.771 - - - mesenchyme homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040718-149]
38. CR354540.2 ENSDARG00000117517 18452 1.469 0.713 - - - - - 0.756 - -
39. si:ch211-242b18.1 ENSDARG00000054723 2929 1.467 0.765 0.702 - - - - - - - si:ch211-242b18.1 [Source:ZFIN;Acc:ZDB-GENE-030131-1518]
40. si:dkey-181m9.5 si:dkey-181m9.5 1079 1.467 0.709 - - - - - 0.758 - -
41. MYOM3 2720 1.466 - 0.747 - - - - 0.719 - - myomesin 3, transcript variant X2
42. cyp4t8 ENSDARG00000004964, ENSDARG00000116412 1111 1.458 0.706 - - - - - - 0.752 - cytochrome P450, family 4, subfamily T, polypeptide 8 [Source:ZFIN;Acc:ZDB-GENE-031219-3]
43. pabpc4 ENSDARG00000059259, ENSDARG00000111312 2392 1.449 0.731 - - - - - 0.718 - - poly(A) binding protein, cytoplasmic 4 (inducible form) [Source:ZFIN;Acc:ZDB-GENE-030131-9663]
44. CU467854.2 CU467854.2 298 1.449 - - - - - 0.712 0.737 - -
45. tgm1l1 ENSDARG00000102106 1437 1.448 0.735 - - - - - 0.713 - - transglutaminase 1 like 1 [Source:ZFIN;Acc:ZDB-GENE-060503-139]
46. smarcd3a ENSDARG00000038786 2894 1.446 0.737 - - - - 0.709 - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3a [Source:ZFIN;Acc:ZDB-GENE-070912-491]
47. smyd1a ENSDARG00000009280 1503 1.444 - - - - - 0.702 0.742 - - SET and MYND domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9825]
48. ryr1b ENSDARG00000023797 5693 1.443 - 0.717 - - - - 0.726 - - ryanodine receptor 1b (skeletal) [Source:ZFIN;Acc:ZDB-GENE-070705-417]
49. ldb3a ENSDARG00000056322, ENSDARG00000116388 2569 1.431 0.707 - - - - - 0.724 - - LIM domain binding 3a [Source:ZFIN;Acc:ZDB-GENE-040121-6]
50. USP15 958 1.423 - 0.710 - - - 0.713 - - - ubiquitin specific peptidase 15
51. zgc:92113 1738 1.42 0.700 - - - - - 0.720 - - zgc:92113
52. rtcb ENSDARG00000101047 496 1.415 0.711 0.704 - - - - - - - RNA 2',3'-cyclic phosphate and 5'-OH ligase [Source:ZFIN;Acc:ZDB-GENE-040426-2096]
53. si:ch211-39k3.2 ENSDARG00000075881 531 0.93 - - - - - - - 0.930 - si:ch211-39k3.2 [Source:ZFIN;Acc:ZDB-GENE-070705-180]
54. traf1 ENSDARG00000069482 50 0.929 - - - - - - - 0.929 - TNF receptor-associated factor 1 [Source:ZFIN;Acc:ZDB-GENE-071120-4]
55. CU855815.2 CU855815.2 80 0.929 - - - - - - - 0.929 -
56. pdlim7 ENSDARG00000103854 465 0.924 - 0.924 - - - - - - - PDZ and LIM domain 7 [Source:ZFIN;Acc:ZDB-GENE-040426-2092]
57. d2hgdh ENSDARG00000060210 362 0.923 - - - - - - - 0.923 - D-2-hydroxyglutarate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-070112-482]
58. RNF115 ENSDARG00000062450 83 0.923 - - - - - - - 0.923 - ring finger protein 115 [Source:ZFIN;Acc:ZDB-GENE-061215-82]
59. BX511263.1 BX511263.1 64 0.922 - - - - - - - 0.922 -
60. frmd4bb ENSDARG00000076496 18 0.922 - - - - - - - 0.922 - FERM domain containing 4Bb [Source:ZFIN;Acc:ZDB-GENE-100921-74]
61. ASTL ASTL 24 0.921 - - - - - - - 0.921 -
62. zgc:63972 ENSDARG00000054288, ENSDARG00000112978 78 0.918 - - - - - - - 0.918 - zgc:63972 [Source:ZFIN;Acc:ZDB-GENE-040426-1320]
63. hbs1l ENSDARG00000036778, ENSDARG00000115090 130 0.917 - - - - - - - 0.917 - HBS1-like translational GTPase [Source:ZFIN;Acc:ZDB-GENE-030131-2987]
64. cyp2k8 ENSDARG00000101190 69 0.917 - - - - - - - 0.917 - cytochrome P450, family 2, subfamily K, polypeptide 8 [Source:ZFIN;Acc:ZDB-GENE-080721-19]
65. NGFR NGFR 186 0.917 - - - - - - - 0.917 -
66. cd40 ENSDARG00000054968 90 0.916 - - - - - - - 0.916 - CD40 molecule, TNF receptor superfamily member 5 [Source:ZFIN;Acc:ZDB-GENE-090313-95]
67. crfb17 511 0.916 - - - - - - - 0.916 - cytokine receptor family member B17
68. CABZ01086801.1 CABZ01086801.1 41 0.916 - - - - - - - 0.916 -
69. si:ch73-196k8.2 si:ch73-196k8.2 427 0.915 - - - - - - - 0.915 -
70. tgm5l ENSDARG00000098837 174 0.913 - - - - - - - 0.913 - transglutaminase 5, like [Source:ZFIN;Acc:ZDB-GENE-110411-176]
71. scarb1 ENSDARG00000101557 503 0.913 - - - - - - - 0.913 - scavenger receptor class B, member 1 [Source:ZFIN;Acc:ZDB-GENE-031126-1]
72. smyd3 ENSDARG00000058050 69 0.911 - - - - - - - 0.911 - SET and MYND domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-051120-138]
73. C13H10orf11 1209 0.911 - - - - - - - 0.911 - c13h10orf11 homolog (H. sapiens), transcript variant X2
74. slc9a8 ENSDARG00000020699 206 0.907 - - - - - - - 0.907 - solute carrier family 9, subfamily A (NHE8, cation proton antiporter 8), member 8 [Source:ZFIN;Acc:ZDB-GENE-041212-7]
75. si:dkey-14d8.2 38 0.905 - - - - - - - 0.905 - si:dkey-14d8.2
76. POLRMT ENSDARG00000101220 215 0.905 - - - - - - - 0.905 - polymerase (RNA) mitochondrial (DNA directed) [Source:ZFIN;Acc:ZDB-GENE-030131-1528]
77. zgc:113294 ENSDARG00000032285 132 0.905 - - - - - - - 0.905 - zgc:113294 [Source:ZFIN;Acc:ZDB-GENE-050320-124]
78. GSTK1_1 GSTK1_1 316 0.904 - - - - - - - 0.904 -
79. PKN2 ENSDARG00000101293 358 0.903 - - - - - - - 0.903 - protein kinase N2 [Source:HGNC Symbol;Acc:HGNC:9406]
80. MAN2C1 ENSDARG00000079835 305 0.903 - - - - - - - 0.903 - mannosidase, alpha, class 2C, member 1 [Source:ZFIN;Acc:ZDB-GENE-101103-4]
81. pfkfb2a ENSDARG00000023840 184 0.903 - - - - - - - 0.903 - 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2a [Source:ZFIN;Acc:ZDB-GENE-040426-966]
82. TRAFD1 ENSDARG00000075123, ENSDARG00000109953 358 0.9 - - - - - - - 0.900 - TRAF-type zinc finger domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-070410-43]
83. C25H12orf73 C25H12orf73 2031 0.899 - 0.899 - - - - - - -
84. pgm2l1 ENSDARG00000014704 140 0.899 - - - - - - - 0.899 - phosphoglucomutase 2-like 1 [Source:ZFIN;Acc:ZDB-GENE-041008-205]
85. acana ENSDARG00000035891 118 0.898 - - - - - - 0.898 - - aggrecan a [Source:ZFIN;Acc:ZDB-GENE-050208-221]
86. CLMN ENSDARG00000096867 73 0.896 - - - - - - - 0.896 - calmin [Source:ZFIN;Acc:ZDB-GENE-131127-546]
87. MAST1_1 MAST1_1 1595 0.896 - 0.896 - - - - - - -
88. fbxw2 ENSDARG00000009745 618 0.896 - - - - - - - 0.896 - F-box and WD repeat domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-050522-303]
89. dusp5 ENSDARG00000019307, ENSDARG00000110831 476 0.896 - - - - - - - 0.896 - dual specificity phosphatase 5 [Source:ZFIN;Acc:ZDB-GENE-010625-1]
90. si:dkey-93n13.2 ENSDARG00000092816 119 0.896 - - - - - - - 0.896 - si:dkey-93n13.2 [Source:ZFIN;Acc:ZDB-GENE-091204-177]
91. zgc:92907 ENSDARG00000011026 986 0.894 - - - - - - - 0.894 - zgc:92907 [Source:ZFIN;Acc:ZDB-GENE-040718-161]
92. si:dkey-70e17.2 si:dkey-70e17.2 371 0.894 - - - - - - - 0.894 -
93. plk2a ENSDARG00000090752 392 0.893 - - - - - - - 0.893 - polo-like kinase 2a (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-060810-71]
94. zfand2a ENSDARG00000103511 829 0.893 - - - - - - - 0.893 - zinc finger, AN1-type domain 2A [Source:ZFIN;Acc:ZDB-GENE-040426-1596]
95. slc8a3 ENSDARG00000004931 338 0.893 - - - - - - - 0.893 - solute carrier family 8 (sodium/calcium exchanger), member 3 [Source:ZFIN;Acc:ZDB-GENE-050810-1]
96. nkx2.9 ENSDARG00000020332 357 0.892 - - - - - - - 0.892 - NK2 transcription factor related, locus 9 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-4340]
97. hbbe2 ENSDARG00000045143, ENSDARG00000109554 5244 0.892 - 0.892 - - - - - - - hemoglobin beta embryonic-2 [Source:ZFIN;Acc:ZDB-GENE-040702-1]
98. SLC27A2 SLC27A2 436 0.89 - - - - - - - 0.890 -
99. GPR17 ENSDARG00000062030 713 0.888 - - - - - 0.888 - - - G protein-coupled receptor 17 [Source:ZFIN;Acc:ZDB-GENE-100922-133]
100. rrp15 ENSDARG00000013478 1126 0.887 - - - - - - - 0.887 - ribosomal RNA processing 15 homolog [Source:ZFIN;Acc:ZDB-GENE-030131-5261]

There are 884 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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