Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for fgf1a

Gene Name Gene ID Reads Annotation
fgf1a ENSDARG00000017542, ENSDARG00000110811, ENSDARG00000114842 227 fibroblast growth factor 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1729]










Genes with expression patterns similar to fgf1a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. fgf1a ENSDARG00000017542, ENSDARG00000110811, ENSDARG00000114842 227 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 fibroblast growth factor 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1729]
2. foxc1b ENSDARG00000055398 1499 1.687 - 0.867 - - - 0.820 - - - forkhead box C1b [Source:ZFIN;Acc:ZDB-GENE-010302-2]
3. CLRN2 ENSDARG00000070321, ENSDARG00000110932 42 1.629 - - - 0.782 - 0.847 - - - clarin 2 [Source:ZFIN;Acc:ZDB-GENE-061207-64]
4. CU468924.1 CU468924.1 544 1.58 - 0.736 - - - 0.844 - - -
5. CABZ01043311.1 CABZ01043311.1 475 1.57 - 0.770 - - - - 0.800 - -
6. dtnba ENSDARG00000077694 5483 1.564 - 0.779 - - - 0.785 - - - dystrobrevin, beta a [Source:ZFIN;Acc:ZDB-GENE-030131-3967]
7. KEL ENSDARG00000076950 159 1.564 - 0.797 - - - 0.767 - - - Kell metallo-endopeptidase (Kell blood group) [Source:ZFIN;Acc:ZDB-GENE-110411-118]
8. rapsn ENSDARG00000041133, ENSDARG00000111358 1416 1.554 - 0.822 - - - 0.732 - - - receptor-associated protein of the synapse, 43kD [Source:ZFIN;Acc:ZDB-GENE-030313-1]
9. CU638714.1 ENSDARG00000100303 2132 1.532 - 0.781 - - - - 0.751 - -
10. lrrfip1a ENSDARG00000030012 1263 1.523 - 0.768 - - - 0.755 - - - leucine rich repeat (in FLII) interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-99]
11. pvalb3 ENSDARG00000022817, ENSDARG00000117131 4180 1.521 - 0.719 - - - 0.802 - - - parvalbumin 3 [Source:ZFIN;Acc:ZDB-GENE-040426-945]
12. mthfr ENSDARG00000053087 373 1.518 - 0.769 - - - - 0.749 - - methylenetetrahydrofolate reductase (NAD(P)H) [Source:ZFIN;Acc:ZDB-GENE-041111-215]
13. plod2 ENSDARG00000011821 1656 1.516 - 0.750 - - - - 0.766 - - procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 [Source:ZFIN;Acc:ZDB-GENE-070326-1]
14. sptb ENSDARG00000030490 7128 1.51 - 0.788 - - - 0.722 - - - spectrin, beta, erythrocytic [Source:ZFIN;Acc:ZDB-GENE-000906-1]
15. entpd5b ENSDARG00000093659 450 1.501 - 0.762 - - - - 0.739 - - ectonucleoside triphosphate diphosphohydrolase 5b [Source:ZFIN;Acc:ZDB-GENE-091118-88]
16. vwde ENSDARG00000103443 5758 1.494 - 0.727 - - - 0.767 - - - von Willebrand factor D and EGF domains [Source:ZFIN;Acc:ZDB-GENE-060929-1226]
17. atp1a2a ENSDARG00000010472, ENSDARG00000111818, ENSDARG00000115733 6341 1.492 - 0.760 - - - - 0.732 - - ATPase Na+/K+ transporting subunit alpha 2 [Source:ZFIN;Acc:ZDB-GENE-001212-6]
18. cbsa ENSDARG00000053500, ENSDARG00000112676 792 1.482 - 0.752 - - - - 0.730 - - cystathionine-beta-synthase a [Source:ZFIN;Acc:ZDB-GENE-050417-367]
19. alpk3a ENSDARG00000078989 1992 1.481 - 0.714 - - - - 0.767 - - alpha-kinase 3a [Source:ZFIN;Acc:ZDB-GENE-050419-48]
20. ecsit ENSDARG00000062834 896 1.479 0.751 0.728 - - - - - - - ECSIT signalling integrator [Source:ZFIN;Acc:ZDB-GENE-030131-1332]
21. jph1a ENSDARG00000058603 2852 1.469 - 0.768 - - - 0.701 - - - junctophilin 1a [Source:ZFIN;Acc:ZDB-GENE-040724-233]
22. CR392006.1 CR392006.1 1401 1.463 - 0.761 - - - 0.702 - - -
23. limch1a ENSDARG00000074275 2981 1.46 - 0.736 - - - 0.724 - - - LIM and calponin homology domains 1a [Source:ZFIN;Acc:ZDB-GENE-090312-153]
24. rai14 ENSDARG00000039974, ENSDARG00000111103 916 1.459 - 0.705 - - - - 0.754 - - retinoic acid induced 14 [Source:ZFIN;Acc:ZDB-GENE-040718-235]
25. APOBEC2 APOBEC2 9 1.45 - - - - - 0.719 0.731 - -
26. ncam1b ENSDARG00000007220 233 1.445 0.716 - - 0.729 - - - - - neural cell adhesion molecule 1b [Source:ZFIN;Acc:ZDB-GENE-010822-2]
27. CT573393.1 CT573393.1 97 1.443 - - - 0.710 - 0.733 - - -
28. zgc:92590 ENSDARG00000040282 13 1.432 0.713 - - - - 0.719 - - - zgc:92590 [Source:ZFIN;Acc:ZDB-GENE-041024-15]
29. BX511021.1 ENSDARG00000073936 647 1.422 - 0.717 - - - 0.705 - - - ferritin, middle subunit-like [Source:NCBI gene;Acc:100006428]
30. klhl40a ENSDARG00000039052 2537 1.42 - 0.716 - - - 0.704 - - - kelch-like family member 40a [Source:ZFIN;Acc:ZDB-GENE-050916-1]
31. CU467854.2 CU467854.2 298 1.408 - 0.701 - - - - 0.707 - -
32. kcnma1a ENSDARG00000079840 2584 1.405 - 0.704 - - - - 0.701 - - potassium large conductance calcium-activated channel, subfamily M, alpha member 1a [Source:ZFIN;Acc:ZDB-GENE-070202-9]
33. traf3 ENSDARG00000022000 156 0.916 - - - - - - 0.916 - - TNF receptor-associated factor 3 [Source:ZFIN;Acc:ZDB-GENE-040801-257]
34. elp2 ENSDARG00000017199 399 0.914 - 0.914 - - - - - - - elongator acetyltransferase complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-060503-525]
35. minal minal 383 0.913 - 0.913 - - - - - - -
36. TRIM67 ENSDARG00000108787 290 0.899 - 0.899 - - - - - - - tripartite motif containing 67 [Source:HGNC Symbol;Acc:HGNC:31859]
37. fam136a ENSDARG00000098401 50 0.886 - 0.886 - - - - - - - family with sequence similarity 136, member A [Source:ZFIN;Acc:ZDB-GENE-040426-2729]
38. tcea3 ENSDARG00000004724 674 0.88 - 0.880 - - - - - - - transcription elongation factor A (SII), 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1860]
39. CR407704.1 CR407704.1 188 0.874 - - - 0.874 - - - - -
40. si:dkey-258f14.2 ENSDARG00000094874 297 0.873 - 0.873 - - - - - - - si:dkey-258f14.2 [Source:ZFIN;Acc:ZDB-GENE-081104-395]
41. atxn7l2b ENSDARG00000056268 226 0.869 - 0.869 - - - - - - - ataxin 7-like 2b [Source:ZFIN;Acc:ZDB-GENE-040718-403]
42. ppie ENSDARG00000103234, ENSDARG00000111596 511 0.865 - 0.865 - - - - - - - peptidylprolyl isomerase E (cyclophilin E) [Source:ZFIN;Acc:ZDB-GENE-050417-167]
43. tspan12 ENSDARG00000032389 419 0.862 - 0.862 - - - - - - - tetraspanin 12 [Source:ZFIN;Acc:ZDB-GENE-040426-1285]
44. u2af1 ENSDARG00000015325 3217 0.86 - 0.860 - - - - - - - U2 small nuclear RNA auxiliary factor 1 [Source:ZFIN;Acc:ZDB-GENE-020419-1]
45. nr2c2 ENSDARG00000042477 356 0.856 - 0.856 - - - - - - - nuclear receptor subfamily 2, group C, member 2 [Source:ZFIN;Acc:ZDB-GENE-080403-8]
46. nhsa ENSDARG00000070227 686 0.854 - 0.854 - - - - - - - Nance-Horan syndrome a (congenital cataracts and dental anomalies) [Source:ZFIN;Acc:ZDB-GENE-090617-1]
47. colq ENSDARG00000019692 656 0.852 - 0.852 - - - - - - - collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase [Source:ZFIN;Acc:ZDB-GENE-110411-119]
48. ARHGAP17 ARHGAP17 29 0.85 - - - 0.850 - - - - -
49. gdf6a ENSDARG00000053479 121 0.85 - - - 0.850 - - - - - growth differentiation factor 6a [Source:ZFIN;Acc:ZDB-GENE-980526-373]
50. cd248b ENSDARG00000077938 2561 0.847 - 0.847 - - - - - - - CD248 molecule, endosialin b [Source:ZFIN;Acc:ZDB-GENE-050309-46]
51. fam212ab 454 0.845 - 0.845 - - - - - - - family with sequence similarity 212, member Ab
52. rbms2b ENSDARG00000056150, ENSDARG00000115483 2104 0.844 - 0.844 - - - - - - - RNA binding motif, single stranded interacting protein 2b [Source:ZFIN;Acc:ZDB-GENE-040801-51]
53. slc24a3 ENSDARG00000006760 418 0.843 - - - - - 0.843 - - - solute carrier family 24 (sodium/potassium/calcium exchanger), member 3 [Source:ZFIN;Acc:ZDB-GENE-090312-67]
54. zbtb33 ENSDARG00000071467, ENSDARG00000112085 1425 0.842 - 0.842 - - - - - - - zinc finger and BTB domain containing 33 [Source:ZFIN;Acc:ZDB-GENE-070412-3]
55. slc37a4b ENSDARG00000077180, ENSDARG00000093531 565 0.842 - 0.842 - - - - - - - solute carrier family 37 (glucose-6-phosphate transporter), member 4b [Source:ZFIN;Acc:ZDB-GENE-040426-827]
56. CABZ01026370.1 CABZ01026370.1 286 0.842 - - - - - 0.842 - - -
57. ispd ENSDARG00000005034 173 0.841 - 0.841 - - - - - - - isoprenoid synthase domain containing [Source:ZFIN;Acc:ZDB-GENE-061110-16]
58. AL954696.1 ENSDARG00000078442 768 0.839 - 0.839 - - - - - - - NOP9 nucleolar protein [Source:NCBI gene;Acc:100332577]
59. akap6 ENSDARG00000077295 1382 0.838 - 0.838 - - - - - - - A kinase (PRKA) anchor protein 6 [Source:ZFIN;Acc:ZDB-GENE-120207-2]
60. CABZ01066734.1 CABZ01066734.1 139 0.837 - 0.837 - - - - - - -
61. CABZ01052953.2 CABZ01052953.2 125 0.837 - 0.837 - - - - - - -
62. rnf180 ENSDARG00000057101, ENSDARG00000114137 270 0.836 - 0.836 - - - - - - - ring finger protein 180 [Source:ZFIN;Acc:ZDB-GENE-040426-1620]
63. MDP1 MDP1 687 0.835 - - - - - 0.835 - - -
64. grasp ENSDARG00000000588, ENSDARG00000113330 766 0.833 - 0.833 - - - - - - - GRP1 (general receptor for phosphoinositides 1)-associated scaffold protein [Source:ZFIN;Acc:ZDB-GENE-060312-30]
65. fbxl22 ENSDARG00000096995 1290 0.832 - 0.832 - - - - - - - F-box and leucine-rich repeat protein 22 [Source:ZFIN;Acc:ZDB-GENE-050227-1]
66. CR385063.1 CR385063.1 590 0.832 - 0.832 - - - - - - -
67. dyrk2 ENSDARG00000094646 2163 0.832 - 0.832 - - - - - - - dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-2804]
68. cspg4 ENSDARG00000078227 1084 0.83 - 0.830 - - - - - - - chondroitin sulfate proteoglycan 4 [Source:ZFIN;Acc:ZDB-GENE-050519-1]
69. kctd12.1 ENSDARG00000069843, ENSDARG00000113802 141 0.829 - - - - - 0.829 - - - potassium channel tetramerisation domain containing 12.1 [Source:ZFIN;Acc:ZDB-GENE-030902-5]
70. dock9b ENSDARG00000016311 122 0.827 - - - - - - 0.827 - - dedicator of cytokinesis 9b [Source:ZFIN;Acc:ZDB-GENE-090916-2]
71. LRRC14 LRRC14 134 0.827 - - - - - - 0.827 - -
72. slc43a1b ENSDARG00000037748 1406 0.826 - 0.826 - - - - - - - solute carrier family 43 (amino acid system L transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-070209-173]
73. obsl1b ENSDARG00000077388 2511 0.825 - 0.825 - - - - - - - obscurin-like 1b [Source:ZFIN;Acc:ZDB-GENE-050809-29]
74. aqp4 ENSDARG00000010565 624 0.823 - - - - - 0.823 - - - aquaporin 4 [Source:ZFIN;Acc:ZDB-GENE-040724-152]
75. pdia2 ENSDARG00000018263 74 0.823 - - - - - 0.823 - - - protein disulfide isomerase family A, member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-705]
76. spata4_1 ENSDARG00000036189, ENSDARG00000114468 39 0.823 - - - - - 0.823 - - - spermatogenesis associated 4 [Source:ZFIN;Acc:ZDB-GENE-050417-153]
77. FGL1 ENSDARG00000105380 147 0.823 - - - - - 0.823 - - - fibrinogen-like 1 [Source:ZFIN;Acc:ZDB-GENE-130815-1]
78. si:ch211-15j21.2 si:ch211-15j21.2 13 0.823 - - - - - 0.823 - - -
79. MYO7B MYO7B 8 0.823 - - - - - 0.823 - - -
80. zgc:171506 ENSDARG00000078206, ENSDARG00000112252 3 0.823 - - - - - 0.823 - - - zgc:171506 [Source:ZFIN;Acc:ZDB-GENE-080204-96]
81. trim35-3_1 ENSDARG00000052255 6 0.823 - - - - - 0.823 - - - tripartite motif containing 35-3 [Source:ZFIN;Acc:ZDB-GENE-070912-56]
82. si:ch211-149b19.2 ENSDARG00000088882 28 0.823 - - - - - 0.823 - - - si:ch211-149b19.2 [Source:ZFIN;Acc:ZDB-GENE-110411-60]
83. kctd3 ENSDARG00000060854 82 0.822 - 0.822 - - - - - - - potassium channel tetramerization domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-060503-169]
84. CABZ01024201.1 CABZ01024201.1 30 0.821 0.821 - - - - - - - -
85. fam213aa 1986 0.821 - 0.821 - - - - - - - family with sequence similarity 213, member Aa
86. mpp5a ENSDARG00000006272 1181 0.82 - 0.820 - - - - - - - membrane protein, palmitoylated 5a (MAGUK p55 subfamily member 5) [Source:ZFIN;Acc:ZDB-GENE-020712-1]
87. dlat ENSDARG00000015918 657 0.82 - - - - - 0.820 - - - dihydrolipoamide S-acetyltransferase (E2 component of pyruvate dehydrogenase complex) [Source:ZFIN;Acc:ZDB-GENE-030131-2921]
88. lnpep ENSDARG00000100394 1436 0.82 - 0.820 - - - - - - - leucyl/cystinyl aminopeptidase [Source:ZFIN;Acc:ZDB-GENE-030131-1534]
89. alpl ENSDARG00000015546 334 0.818 - 0.818 - - - - - - - alkaline phosphatase, liver/bone/kidney [Source:ZFIN;Acc:ZDB-GENE-040420-1]
90. cdkal1 ENSDARG00000104848 2102 0.818 - 0.818 - - - - - - - CDK5 regulatory subunit associated protein 1-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1443]
91. serpinf1 ENSDARG00000069048 2083 0.817 - 0.817 - - - - - - - serpin peptidase inhibitor, clade F (alpha-2 antiplasmin, pigment epithelium derived factor), member 1 [Source:ZFIN;Acc:ZDB-GENE-040912-2]
92. chchd4 chchd4 785 0.816 - 0.816 - - - - - - -
93. C3H19orf52 C3H19orf52 541 0.815 - 0.815 - - - - - - -
94. scxa ENSDARG00000035695 255 0.815 - - - - - 0.815 - - - scleraxis bHLH transcription factor a [Source:ZFIN;Acc:ZDB-GENE-060503-414]
95. ednrab ENSDARG00000062262 565 0.814 - - - - - 0.814 - - - endothelin receptor type Ab [Source:ZFIN;Acc:ZDB-GENE-040426-2364]
96. TRIM63 TRIM63 1600 0.814 - 0.814 - - - - - - -
97. nsd1b ENSDARG00000060705 88 0.814 - 0.814 - - - - - - - nuclear receptor binding SET domain protein 1b [Source:ZFIN;Acc:ZDB-GENE-080519-2]
98. hfe2 4113 0.814 - 0.814 - - - - - - - hemochromatosis type 2
99. ssb ENSDARG00000029252 3394 0.812 - 0.812 - - - - - - - Sjogren syndrome antigen B (autoantigen La) [Source:ZFIN;Acc:ZDB-GENE-030131-223]
100. slc25a16 ENSDARG00000057287, ENSDARG00000109352 988 0.811 - 0.811 - - - - - - - solute carrier family 25 (mitochondrial carrier; Graves disease autoantigen), member 16 [Source:ZFIN;Acc:ZDB-GENE-030131-3299]

There are 688 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA