Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for fen1

Gene Name Gene ID Reads Annotation
fen1 ENSDARG00000011404 3358 flap structure-specific endonuclease 1 [Source:ZFIN;Acc:ZDB-GENE-031112-11]










Genes with expression patterns similar to fen1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. fen1 ENSDARG00000011404 3358 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 flap structure-specific endonuclease 1 [Source:ZFIN;Acc:ZDB-GENE-031112-11]
2. kdm1a ENSDARG00000060679 6152 3.138 - 0.722 0.733 - 0.940 - 0.743 - - lysine (K)-specific demethylase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-7828]
3. znf865 ENSDARG00000036698 15532 2.515 - 0.766 - - 0.933 - 0.816 - - zinc finger protein 865 [Source:ZFIN;Acc:ZDB-GENE-060503-896]
4. dhfr ENSDARG00000004251 1824 2.479 - 0.802 - - 0.938 0.739 - - - dihydrofolate reductase [Source:ZFIN;Acc:ZDB-GENE-010406-5]
5. wu:fc51f04 wu:fc51f04 7074 2.447 - 0.753 - 0.760 0.934 - - - -
6. ylpm1 ENSDARG00000043680 7676 2.426 - - 0.760 - 0.788 - 0.878 - - YLP motif containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2196]
7. ube2g1a ENSDARG00000015292, ENSDARG00000112281 3207 2.398 - - - - 0.932 - 0.751 - 0.715 ubiquitin-conjugating enzyme E2G 1a (UBC7 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-6065]
8. hirip3 ENSDARG00000027749, ENSDARG00000115688 5875 2.388 - 0.806 0.741 - - - 0.841 - - HIRA interacting protein 3 [Source:ZFIN;Acc:ZDB-GENE-030131-5753]
9. srpk1b ENSDARG00000031560 2079 2.383 - - 0.704 - 0.961 - - - 0.718 SRSF protein kinase 1b [Source:ZFIN;Acc:ZDB-GENE-070112-2292]
10. dr1 ENSDARG00000105098, ENSDARG00000113528 5263 2.351 - - 0.756 - 0.879 - - - 0.716 down-regulator of transcription 1 [Source:ZFIN;Acc:ZDB-GENE-061013-797]
11. luc7l ENSDARG00000055903 3357 2.343 0.744 0.866 - - - - 0.733 - - LUC7-like (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040625-111]
12. stmn1a ENSDARG00000004169 21169 2.343 - - 0.750 - - - 0.838 - 0.755 stathmin 1a [Source:ZFIN;Acc:ZDB-GENE-031006-14]
13. rbb4 rbb4 15541 2.34 - - 0.850 - - - 0.753 - 0.737
14. mcm7 ENSDARG00000101180 12417 2.337 0.764 - - - 0.754 - 0.819 - - minichromosome maintenance complex component 7 [Source:ZFIN;Acc:ZDB-GENE-020419-27]
15. tnpo2 ENSDARG00000038239 2469 2.322 - 0.815 - - - - 0.771 - 0.736 transportin 2 (importin 3, karyopherin beta 2b) [Source:ZFIN;Acc:ZDB-GENE-040822-16]
16. tgif1 ENSDARG00000059337 4020 2.296 - - 0.783 - - - 0.793 - 0.720 TGFB-induced factor homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-030131-475]
17. apex1 ENSDARG00000045843 6345 2.293 - - 0.726 0.748 - - 0.819 - - APEX nuclease (multifunctional DNA repair enzyme) 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2761]
18. smc1al ENSDARG00000058203 8838 2.287 - - 0.783 - - - 0.790 - 0.714 structural maintenance of chromosomes 1A, like [Source:ZFIN;Acc:ZDB-GENE-040426-57]
19. sf3b5 ENSDARG00000016855 4015 2.269 - 0.805 - - - - 0.759 0.705 - splicing factor 3b, subunit 5 [Source:ZFIN;Acc:ZDB-GENE-040718-181]
20. puf60a ENSDARG00000032175 5618 2.265 - 0.736 0.720 - - - 0.809 - - poly-U binding splicing factor a [Source:ZFIN;Acc:ZDB-GENE-030131-2891]
21. nop58 ENSDARG00000104353 8497 2.26 - 0.747 - - - - 0.740 - 0.773 NOP58 ribonucleoprotein homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-2140]
22. srrm1 ENSDARG00000001244 4972 2.255 - - 0.745 0.742 - - 0.768 - - serine/arginine repetitive matrix 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2789]
23. vezf1b ENSDARG00000061030 1410 2.254 - 0.825 0.715 - - - 0.714 - - vascular endothelial zinc finger 1b [Source:ZFIN;Acc:ZDB-GENE-060825-121]
24. ezh2 ENSDARG00000010571 3273 2.246 - 0.732 0.749 - - - 0.765 - - enhancer of zeste 2 polycomb repressive complex 2 subunit [Source:ZFIN;Acc:ZDB-GENE-041111-259]
25. rpa3 ENSDARG00000002613 2923 2.219 - - 0.734 - - - 0.730 - 0.755 replication protein A3 [Source:ZFIN;Acc:ZDB-GENE-040426-977]
26. usp10 ENSDARG00000103422 4247 2.203 - 0.790 0.710 - - - 0.703 - - ubiquitin specific peptidase 10 [Source:ZFIN;Acc:ZDB-GENE-030219-132]
27. hmgb2b ENSDARG00000053990 11519 2.188 - - - - 0.716 - 0.738 - 0.734 high mobility group box 2b [Source:ZFIN;Acc:ZDB-GENE-040912-122]
28. C1H4orf27 C1H4orf27 1961 2.154 - 0.721 - - - - 0.711 - 0.722
29. fam60al 2846 2.113 - - 0.701 0.701 - - 0.711 - - family with sequence similarity 60, member A, like
30. htatip htatip 1553 1.771 - - - - 0.943 - - 0.828 -
31. psmb6 ENSDARG00000002240 8015 1.756 - - - - 0.930 - - - 0.826 proteasome subunit beta 6 [Source:ZFIN;Acc:ZDB-GENE-990415-216]
32. zgc:123105 ENSDARG00000003127 3061 1.756 - - - - 0.933 - 0.823 - - zgc:123105 [Source:ZFIN;Acc:ZDB-GENE-051113-272]
33. C24H17orf96 C24H17orf96 1538 1.745 - - - - 0.962 - 0.783 - -
34. h2afx ENSDARG00000029406 2116 1.737 - - - - 0.914 - 0.823 - - H2A histone family, member X [Source:ZFIN;Acc:ZDB-GENE-040426-987]
35. rbm15b ENSDARG00000078966, ENSDARG00000112832 1888 1.721 - - - - 0.946 - 0.775 - - RNA binding motif protein 15B [Source:ZFIN;Acc:ZDB-GENE-080204-91]
36. prdm16 prdm16 1346 1.704 - - - - 0.926 - 0.778 - -
37. gins2 ENSDARG00000002304 1187 1.704 - - - 0.768 0.936 - - - - GINS complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-050419-19]
38. lsm14ab ENSDARG00000100553 3837 1.704 - - - - 0.953 - 0.751 - - LSM14A mRNA processing body assembly factor b [Source:ZFIN;Acc:ZDB-GENE-040426-2462]
39. SERBP1 SERBP1 9276 1.702 0.843 - - - - - 0.859 - -
40. FAM168B ENSDARG00000101733, ENSDARG00000113953, ENSDARG00000115746 2175 1.695 - - - - 0.945 - 0.750 - - family with sequence similarity 168, member B [Source:ZFIN;Acc:ZDB-GENE-060929-180]
41. kif22 ENSDARG00000102624 3694 1.68 - - 0.752 - 0.928 - - - - kinesin family member 22 [Source:ZFIN;Acc:ZDB-GENE-080204-34]
42. brd3b ENSDARG00000100129 6387 1.68 - - - - 0.913 - 0.767 - - bromodomain containing 3b [Source:ZFIN;Acc:ZDB-GENE-030131-5316]
43. nucks1a ENSDARG00000078473 28285 1.678 - 0.898 0.780 - - - - - - nuclear casein kinase and cyclin-dependent kinase substrate 1a [Source:ZFIN;Acc:ZDB-GENE-040912-175]
44. fbxl14a ENSDARG00000034497, ENSDARG00000110327 3132 1.677 - - - - 0.943 - 0.734 - - F-box and leucine-rich repeat protein 14a [Source:ZFIN;Acc:ZDB-GENE-030131-5920]
45. supt6h ENSDARG00000006524 3221 1.675 - - - - 0.950 - 0.725 - - SPT6 homolog, histone chaperone [Source:ZFIN;Acc:ZDB-GENE-030131-7949]
46. st8sia6 ENSDARG00000021195 2244 1.668 - 0.758 - - 0.910 - - - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6 [Source:ZFIN;Acc:ZDB-GENE-060322-9]
47. dpysl2b ENSDARG00000032083, ENSDARG00000109782 3487 1.668 - - - - 0.952 - 0.716 - - dihydropyrimidinase-like 2b [Source:ZFIN;Acc:ZDB-GENE-031105-1]
48. snrpd3l ENSDARG00000076283 7655 1.667 - - - - 0.866 - 0.801 - - small nuclear ribonucleoprotein D3 polypeptide, like [Source:ZFIN;Acc:ZDB-GENE-030131-5219]
49. UBE2QL1 ENSDARG00000079276 3474 1.667 - - - - 0.926 - 0.741 - - ubiquitin-conjugating enzyme E2Q family-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8137]
50. nup50 ENSDARG00000017454 4425 1.665 - - 0.718 - 0.947 - - - - nucleoporin 50 [Source:ZFIN;Acc:ZDB-GENE-030131-1689]
51. paxip1 ENSDARG00000005606 1417 1.664 - - - - 0.942 - 0.722 - - PAX interacting (with transcription-activation domain) protein 1 [Source:ZFIN;Acc:ZDB-GENE-041010-214]
52. mcts1 ENSDARG00000025972 4662 1.663 - - - - 0.892 - 0.771 - - malignant T cell amplified sequence 1 [Source:ZFIN;Acc:ZDB-GENE-040426-957]
53. zic5 ENSDARG00000016022 1034 1.662 - - 0.719 - 0.943 - - - - zic family member 5 (odd-paired homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040622-1]
54. nuf2 ENSDARG00000034624 2252 1.659 - - - - 0.950 - 0.709 - - NUF2, NDC80 kinetochore complex component, homolog [Source:ZFIN;Acc:ZDB-GENE-040426-1121]
55. gabpa ENSDARG00000069289, ENSDARG00000110923 1536 1.657 - - 0.716 - 0.941 - - - - GA binding protein transcription factor subunit alpha [Source:ZFIN;Acc:ZDB-GENE-011010-2]
56. ttk ENSDARG00000041361 3911 1.652 - 0.745 - - - - 0.907 - - ttk protein kinase [Source:ZFIN;Acc:ZDB-GENE-030123-1]
57. sin3b ENSDARG00000062472 2025 1.651 - - - - 0.935 - 0.716 - - SIN3 transcription regulator family member B [Source:ZFIN;Acc:ZDB-GENE-030131-8264]
58. smo ENSDARG00000002952 6411 1.651 - - - - 0.935 - 0.716 - - smoothened, frizzled class receptor [Source:ZFIN;Acc:ZDB-GENE-980526-89]
59. lgi1a ENSDARG00000020493 1218 1.646 - - - - 0.920 - - - 0.726 leucine-rich, glioma inactivated 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1731]
60. hmg20a ENSDARG00000031198 1763 1.637 - - - - 0.836 - 0.801 - - high mobility group 20A [Source:ZFIN;Acc:ZDB-GENE-030131-5107]
61. pdpk1b ENSDARG00000018285 957 1.634 - - - - 0.910 - 0.724 - - 3-phosphoinositide dependent protein kinase 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1820]
62. hoxb1b ENSDARG00000054033, ENSDARG00000112663 1967 1.633 - 0.857 - - - - 0.776 - - homeobox B1b [Source:ZFIN;Acc:ZDB-GENE-980526-290]
63. med14 ENSDARG00000009953 1383 1.632 - - - - 0.932 - - - 0.700 mediator complex subunit 14 [Source:ZFIN;Acc:ZDB-GENE-030131-8867]
64. dlg3_1 ENSDARG00000076796, ENSDARG00000111101 1542 1.628 - 0.708 - - 0.920 - - - - discs, large homolog 3 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-050208-93]
65. ypel5 ENSDARG00000088929 1011 1.627 - - - - 0.913 - 0.714 - - yippee-like 5 [Source:ZFIN;Acc:ZDB-GENE-040426-1220]
66. spag7 ENSDARG00000011555 3224 1.626 - - - - 0.915 - 0.711 - - sperm associated antigen 7 [Source:ZFIN;Acc:ZDB-GENE-040426-1632]
67. h2afva ENSDARG00000068820 16427 1.626 - - - 0.761 - - 0.865 - - H2A histone family, member Va [Source:ZFIN;Acc:ZDB-GENE-020717-1]
68. pum1 ENSDARG00000099256 5017 1.623 - 0.863 - - - - 0.760 - - pumilio RNA-binding family member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2074]
69. msi1 ENSDARG00000010710 2634 1.619 - - 0.735 - 0.884 - - - - musashi RNA-binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050320-86]
70. sfpq ENSDARG00000011564, ENSDARG00000115611 15626 1.617 - - - - - - 0.856 - 0.761 splicing factor proline/glutamine-rich [Source:ZFIN;Acc:ZDB-GENE-040426-2452]
71. pygo2 ENSDARG00000036772 2510 1.61 - - - - 0.867 - 0.743 - - pygopus homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-050809-108]
72. wu:fj29h11 ENSDARG00000096562 863 1.607 - 0.863 - - - - 0.744 - - wu:fj29h11 [Source:ZFIN;Acc:ZDB-GENE-030131-7558]
73. naa40 ENSDARG00000024109, ENSDARG00000090570 4759 1.598 - - - - 0.893 - - - 0.705 N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050417-105]
74. akap12b ENSDARG00000055678, ENSDARG00000110544 8317 1.595 - 0.886 0.709 - - - - - - A kinase (PRKA) anchor protein 12b [Source:ZFIN;Acc:ZDB-GENE-030131-9753]
75. BX511086.1 BX511086.1 8308 1.586 0.767 - - - - - 0.819 - -
76. dusp6 ENSDARG00000070914, ENSDARG00000116888 4473 1.584 - - - - 0.855 0.729 - - - dual specificity phosphatase 6 [Source:ZFIN;Acc:ZDB-GENE-030613-1]
77. smarce1 ENSDARG00000016871 9628 1.582 0.772 - - - - - 0.810 - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-967]
78. hnrnpr ENSDARG00000014569 3423 1.581 - 0.739 - - - - 0.842 - - heterogeneous nuclear ribonucleoprotein R [Source:ZFIN;Acc:ZDB-GENE-040426-2766]
79. znf207b ENSDARG00000101277, ENSDARG00000110098, ENSDARG00000115586 4227 1.58 - 0.766 - - - - 0.814 - - zinc finger protein 207, b [Source:ZFIN;Acc:ZDB-GENE-030131-7377]
80. ube4b ENSDARG00000037017 8012 1.58 - - - - 0.870 - - - 0.710 ubiquitination factor E4B, UFD2 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-020205-1]
81. znf207a ENSDARG00000015538 2630 1.578 - 0.781 - - - - 0.797 - - zinc finger protein 207, a [Source:ZFIN;Acc:ZDB-GENE-040426-2273]
82. lrrc40 ENSDARG00000017708 1156 1.575 - - - - 0.844 - 0.731 - - leucine rich repeat containing 40 [Source:ZFIN;Acc:ZDB-GENE-030131-6062]
83. pank1b ENSDARG00000010098 3202 1.574 - - - - 0.813 - 0.761 - - pantothenate kinase 1b [Source:ZFIN;Acc:ZDB-GENE-070209-259]
84. ewsr1a ENSDARG00000020258, ENSDARG00000113252 11221 1.571 - - - - - - 0.849 - 0.722 EWS RNA-binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2317]
85. abcf2a ENSDARG00000038785 2065 1.569 - 0.806 - - - - 0.763 - - ATP-binding cassette, sub-family F (GCN20), member 2a [Source:ZFIN;Acc:ZDB-GENE-030131-8714]
86. sumo3a ENSDARG00000028119 13447 1.567 - - - - - - 0.849 - 0.718 small ubiquitin-like modifier 3a [Source:ZFIN;Acc:ZDB-GENE-040426-2133]
87. scoca ENSDARG00000087333 1739 1.563 - - - - - 0.752 0.811 - - short coiled-coil protein a [Source:ZFIN;Acc:ZDB-GENE-061013-114]
88. mcm5 ENSDARG00000019507 6407 1.558 - - - 0.724 - - - - 0.834 minichromosome maintenance complex component 5 [Source:ZFIN;Acc:ZDB-GENE-021209-1]
89. smarcd1 ENSDARG00000019004 6028 1.556 0.764 - - - - - 0.792 - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1835]
90. SNRPG ENSDARG00000099667 18697 1.554 - 0.780 - - - - - - 0.774 small nuclear ribonucleoprotein polypeptide G [Source:ZFIN;Acc:ZDB-GENE-040912-105]
91. inip ENSDARG00000028523 1925 1.553 - 0.793 - - - - 0.760 - - ints3 and nabp interacting protein [Source:ZFIN;Acc:ZDB-GENE-040426-961]
92. smg5 ENSDARG00000041481 1286 1.552 - - - - - - 0.794 - 0.758 SMG5 nonsense mediated mRNA decay factor [Source:ZFIN;Acc:ZDB-GENE-050913-144]
93. u2af2b ENSDARG00000011740 6946 1.55 - - 0.786 - - - 0.764 - - U2 small nuclear RNA auxiliary factor 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1881]
94. her6 ENSDARG00000006514, ENSDARG00000111099 7477 1.55 - 0.708 - - 0.842 - - - - hairy-related 6 [Source:ZFIN;Acc:ZDB-GENE-980526-144]
95. ppih ENSDARG00000041530 2085 1.548 - - - 0.708 - - 0.840 - - peptidylprolyl isomerase H (cyclophilin H) [Source:ZFIN;Acc:ZDB-GENE-040625-127]
96. tia1 ENSDARG00000052536, ENSDARG00000114478 4392 1.546 - - 0.730 - - - 0.816 - - TIA1 cytotoxic granule-associated RNA binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-1506]
97. hoxb10a ENSDARG00000011579 2135 1.542 - 0.757 - - - - 0.785 - - homeobox B10a [Source:ZFIN;Acc:ZDB-GENE-000328-2]
98. calm1a ENSDARG00000021811 4791 1.542 - - - - 0.797 - 0.745 - - calmodulin 1a [Source:ZFIN;Acc:ZDB-GENE-030131-8308]
99. CABZ01080568.2 CABZ01080568.2 2137 1.54 - - 0.713 - - - 0.827 - -
100. eif3m ENSDARG00000013931 8117 1.54 - 0.716 - - 0.824 - - - - eukaryotic translation initiation factor 3, subunit M [Source:ZFIN;Acc:ZDB-GENE-040426-2643]

There are 1255 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA