Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for fem1c

Gene Name Gene ID Reads Annotation
fem1c ENSDARG00000102147 336 fem-1 homolog c (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-031008-3]










Genes with expression patterns similar to fem1c

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. fem1c ENSDARG00000102147 336 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 fem-1 homolog c (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-031008-3]
2. ENSDARG00000092971 ENSDARG00000092971 563 1.57 0.800 - - - - 0.770 - - -
3. BCKDHB ENSDARG00000014676 3725 1.536 - 0.820 - - - - 0.716 - - branched chain keto acid dehydrogenase E1, beta polypeptide [Source:ZFIN;Acc:ZDB-GENE-030124-2]
4. cilp ENSDARG00000053362 1429 1.532 - 0.723 - - - - 0.809 - - cartilage intermediate layer protein, nucleotide pyrophosphohydrolase [Source:ZFIN;Acc:ZDB-GENE-050208-76]
5. fpgt ENSDARG00000042139 155 1.53 - - - - - 0.711 - - 0.819 fucose-1-phosphate guanylyltransferase [Source:ZFIN;Acc:ZDB-GENE-050522-489]
6. BX511021.1 ENSDARG00000073936 647 1.528 - 0.736 - - - - - - 0.792 ferritin, middle subunit-like [Source:NCBI gene;Acc:100006428]
7. ablim3 ENSDARG00000088168, ENSDARG00000112071, ENSDARG00000114074 573 1.521 - - - - - - 0.729 - 0.792 actin binding LIM protein family, member 3 [Source:ZFIN;Acc:ZDB-GENE-070112-1122]
8. ADAMTSL3 ENSDARG00000027903 278 1.52 - - - - - 0.733 - - 0.787 ADAMTS-like 3 [Source:ZFIN;Acc:ZDB-GENE-121030-8]
9. FSD2 518 1.514 - 0.786 - - - - 0.728 - - fibronectin type III and SPRY domain containing 2
10. txn2 ENSDARG00000034777 4071 1.501 - 0.776 - - - - 0.725 - - thioredoxin 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1795]
11. rreb1b ENSDARG00000042652 2731 1.495 - 0.759 - - - - 0.736 - - ras responsive element binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-070912-273]
12. pomp ENSDARG00000032296 4439 1.493 - 0.752 - - - - 0.741 - - proteasome maturation protein [Source:ZFIN;Acc:ZDB-GENE-040801-10]
13. hapln1a ENSDARG00000089769 12334 1.493 - 0.731 - - - - 0.762 - - hyaluronan and proteoglycan link protein 1a [Source:ZFIN;Acc:ZDB-GENE-050302-175]
14. klhl21 ENSDARG00000039255 2550 1.486 - 0.749 - - - - 0.737 - - kelch-like family member 21 [Source:ZFIN;Acc:ZDB-GENE-040426-2627]
15. cd248b ENSDARG00000077938 2561 1.484 - 0.738 - - - - 0.746 - - CD248 molecule, endosialin b [Source:ZFIN;Acc:ZDB-GENE-050309-46]
16. nap1l4b ENSDARG00000068868 3285 1.483 - 0.778 - - - - 0.705 - - nucleosome assembly protein 1-like 4b [Source:ZFIN;Acc:ZDB-GENE-041114-168]
17. rpf2 ENSDARG00000043960 2719 1.48 - 0.753 - - - - 0.727 - - ribosome production factor 2 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-2501]
18. adcy6a ENSDARG00000061445, ENSDARG00000114782 500 1.48 - - - - - - 0.718 - 0.762 adenylate cyclase 6a [Source:ZFIN;Acc:ZDB-GENE-060221-1]
19. fitm1 ENSDARG00000056464 1759 1.478 - 0.725 - - - - 0.753 - - fat storage-inducing transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-050306-28]
20. C8H22orf39 C8H22orf39 1236 1.477 - - - - - - 0.771 - 0.706
21. coe2 coe2 1633 1.474 - 0.741 - - - - 0.733 - -
22. si:dkey-15h8.12 si:dkey-15h8.12 206 1.471 - - 0.713 - - - - - 0.758
23. egln1 egln1 3746 1.464 - 0.713 - - - - 0.751 - -
24. rock2b ENSDARG00000004877, ENSDARG00000096433 135 1.461 - 0.733 - - - - - - 0.728 rho-associated, coiled-coil containing protein kinase 2b [Source:ZFIN;Acc:ZDB-GENE-060125-2]
25. ptcd1 ENSDARG00000076176 281 1.452 - - - - - - 0.703 - 0.749 pentatricopeptide repeat domain 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6146]
26. osbpl2a ENSDARG00000053804 1883 1.449 - 0.744 - - - - 0.705 - - oxysterol binding protein-like 2a [Source:ZFIN;Acc:ZDB-GENE-091116-46]
27. akap6 ENSDARG00000077295 1382 1.447 - 0.706 - - - - 0.741 - - A kinase (PRKA) anchor protein 6 [Source:ZFIN;Acc:ZDB-GENE-120207-2]
28. col11a1b ENSDARG00000009014 9998 1.431 - 0.701 - - - - 0.730 - - collagen, type XI, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-070912-607]
29. farsa ENSDARG00000098825 2813 1.43 - 0.726 - - - - 0.704 - - phenylalanyl-tRNA synthetase subunit alpha [Source:ZFIN;Acc:ZDB-GENE-050512-2]
30. znf648 ENSDARG00000104823 1918 1.428 - 0.726 - - - - 0.702 - - zinc finger protein 648 [Source:ZFIN;Acc:ZDB-GENE-120215-149]
31. setd3 ENSDARG00000016513 1507 1.42 - 0.713 - - - - - - 0.707 SET domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9137]
32. txlnbb ENSDARG00000076241 6396 1.411 - 0.702 - - - - 0.709 - - taxilin beta b [Source:ZFIN;Acc:ZDB-GENE-070424-77]
33. rin2 ENSDARG00000074589 445 0.913 - 0.913 - - - - - - - Ras and Rab interactor 2 [Source:ZFIN;Acc:ZDB-GENE-090312-194]
34. prkrip1 ENSDARG00000033126, ENSDARG00000113803 1634 0.888 - 0.888 - - - - - - - PRKR interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-111011-2]
35. CU929225.1 CU929225.1 104 0.886 - - - - - - - - 0.886
36. VPS37C ENSDARG00000031836 906 0.882 - 0.882 - - - - - - - vacuolar protein sorting 37 homolog C (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-061110-126]
37. sptlc3 ENSDARG00000030743 596 0.88 - - - - - - - - 0.880 serine palmitoyltransferase, long chain base subunit 3 [Source:ZFIN;Acc:ZDB-GENE-041210-281]
38. heatr3 ENSDARG00000036076 944 0.872 - - - - - - 0.872 - - HEAT repeat containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1876]
39. igdcc4 ENSDARG00000076919 1303 0.868 - 0.868 - - - - - - - immunoglobulin superfamily, DCC subclass, member 4 [Source:ZFIN;Acc:ZDB-GENE-080327-32]
40. MLLT1 MLLT1 349 0.865 - 0.865 - - - - - - -
41. fam208ab ENSDARG00000013346, ENSDARG00000113202 538 0.862 - 0.862 - - - - - - - family with sequence similarity 208, member Ab [Source:ZFIN;Acc:ZDB-GENE-090311-29]
42. BX927164.2 BX927164.2 279 0.86 - 0.860 - - - - - - -
43. RUFY1 ENSDARG00000078685 114 0.855 - - - - - - - - 0.855 RUN and FYVE domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-090421-4]
44. mast4 1164 0.855 - 0.855 - - - - - - - microtubule associated serine/threonine kinase family member 4, transcript variant X6
45. FP236168.1 FP236168.1 150 0.853 - - - - - - - - 0.853
46. SRR SRR 544 0.851 - - - - - - - - 0.851
47. fgfbp1 fgfbp1 445 0.85 - 0.850 - - - - - - -
48. mst4 mst4 1672 0.85 - - - - - - - - 0.850
49. MEGF9_1 MEGF9_1 537 0.849 - 0.849 - - - - - - -
50. ndp ENSDARG00000076569 120 0.847 - - - - - - 0.847 - - Norrie disease (pseudoglioma) [Source:ZFIN;Acc:ZDB-GENE-060216-2]
51. HEATR2_1 HEATR2_1 166 0.842 - - - - - - - - 0.842
52. slc5a3a ENSDARG00000010376 134 0.841 - - - - - - - - 0.841 solute carrier family 5 (sodium/myo-inositol cotransporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-090312-3]
53. ABCF3 ENSDARG00000089705 195 0.841 - 0.841 - - - - - - - ATP-binding cassette, sub-family F (GCN20), member 3 [Source:ZFIN;Acc:ZDB-GENE-050517-32]
54. pnpla7b ENSDARG00000040002 1217 0.841 - - - - - 0.841 - - - patatin-like phospholipase domain containing 7b [Source:ZFIN;Acc:ZDB-GENE-050309-66]
55. osbp2 ENSDARG00000053487 42 0.839 - - - - - - - - 0.839 oxysterol binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-091113-18]
56. ccdc106 ccdc106 101 0.839 - - - - - - - - 0.839
57. si:dkey-238o14.6 si:dkey-238o14.6 42 0.838 - - - - - - - - 0.838
58. stx11a ENSDARG00000044039 39 0.837 - - - - - - - - 0.837 syntaxin 11a [Source:ZFIN;Acc:ZDB-GENE-040426-2564]
59. KIF21B ENSDARG00000009733 53 0.835 - - - - - - - - 0.835 kinesin family member 21B [Source:ZFIN;Acc:ZDB-GENE-130530-537]
60. ANKRD50 ENSDARG00000045666 1756 0.835 - 0.835 - - - - - - - ankyrin repeat domain 50 [Source:HGNC Symbol;Acc:HGNC:29223]
61. TULP3 TULP3 433 0.835 - 0.835 - - - - - - -
62. SLC36A4 ENSDARG00000039661 175 0.833 - - - - - - - - 0.833 solute carrier family 36 (proton/amino acid symporter), member 4 [Source:ZFIN;Acc:ZDB-GENE-050309-239]
63. par1 par1 564 0.833 - - - - - - 0.833 - -
64. QPCT ENSDARG00000089717 1383 0.832 - - - - - - - - 0.832 glutaminyl-peptide cyclotransferase [Source:ZFIN;Acc:ZDB-GENE-130827-1]
65. mrpl27 ENSDARG00000032985 2158 0.832 - 0.832 - - - - - - - mitochondrial ribosomal protein L27 [Source:ZFIN;Acc:ZDB-GENE-050522-129]
66. hmgcra ENSDARG00000052734, ENSDARG00000109336 45 0.831 - - - - - - - - 0.831 3-hydroxy-3-methylglutaryl-CoA reductase a [Source:ZFIN;Acc:ZDB-GENE-040401-2]
67. MRPL53_1 MRPL53_1 83 0.831 - - - - - - - - 0.831
68. si:ch211-89f7.1 si:ch211-89f7.1 699 0.831 - - - - - - - - 0.831
69. kcnn1b ENSDARG00000023546 152 0.831 - 0.831 - - - - - - - potassium intermediate/small conductance calcium-activated channel, subfamily N, member 1b [Source:ZFIN;Acc:ZDB-GENE-060503-397]
70. si:ch211-202h22.10 ENSDARG00000087290 13 0.83 - - - - - - - - 0.830 si:ch211-202h22.10 [Source:ZFIN;Acc:ZDB-GENE-110914-121]
71. C5H9orf171 C5H9orf171 34 0.83 - - - - - - - - 0.830
72. trim35-39 ENSDARG00000071241 464 0.83 - 0.830 - - - - - - - tripartite motif containing 35-39 [Source:ZFIN;Acc:ZDB-GENE-080219-13]
73. si:dkeyp-19e1.3 ENSDARG00000051836 531 0.83 - - - - - - - - 0.830 si:dkeyp-19e1.3 [Source:ZFIN;Acc:ZDB-GENE-081104-56]
74. CRHR2 ENSDARG00000092918, ENSDARG00000103704 12 0.83 - - - - - - - - 0.830 corticotropin releasing hormone receptor 2 [Source:NCBI gene;Acc:100002312]
75. si:ch211-76l23.5 si:ch211-76l23.5 26 0.829 - - - - - - - - 0.829
76. slc39a1 ENSDARG00000058257, ENSDARG00000112079 293 0.829 - - - - - 0.829 - - - solute carrier family 39 (zinc transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9917]
77. C25H12orf73 C25H12orf73 2031 0.829 - 0.829 - - - - - - -
78. ribc1 ENSDARG00000055739 32 0.829 - - - - - - - - 0.829 RIB43A domain with coiled-coils 1 [Source:ZFIN;Acc:ZDB-GENE-081031-7]
79. cdk15 ENSDARG00000006093 252 0.828 - 0.828 - - - - - - - cyclin-dependent kinase 15 [Source:ZFIN;Acc:ZDB-GENE-060421-7193]
80. zgc:165481 ENSDARG00000060092 95 0.827 - - - - - - - - 0.827 zgc:165481 [Source:ZFIN;Acc:ZDB-GENE-070615-21]
81. alkbh5 ENSDARG00000063003 185 0.827 - 0.827 - - - - - - - alkB homolog 5, RNA demethylase [Source:ZFIN;Acc:ZDB-GENE-061013-602]
82. si:dkeyp-104h9.5 ENSDARG00000073801 722 0.827 - - - - - - - - 0.827 si:dkeyp-104h9.5 [Source:ZFIN;Acc:ZDB-GENE-081104-449]
83. BX649554.3_1 BX649554.3_1 1071 0.827 - - - - - - - - 0.827
84. pnck ENSDARG00000043648 114 0.826 - - - - - 0.826 - - - pregnancy up-regulated nonubiquitous CaM kinase [Source:ZFIN;Acc:ZDB-GENE-081105-127]
85. gpr126 gpr126 51 0.826 - - - - - - - - 0.826
86. dnajb13 ENSDARG00000043157 50 0.826 - - - - - - - - 0.826 DnaJ (Hsp40) homolog, subfamily B, member 13 [Source:ZFIN;Acc:ZDB-GENE-040910-4]
87. URB1 ENSDARG00000060308 78 0.825 - - - - - - - - 0.825 URB1 ribosome biogenesis 1 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-5181]
88. PYURF ENSDARG00000045773 4576 0.825 - - - - - - 0.825 - - PIGY upstream reading frame [Source:HGNC Symbol;Acc:HGNC:44317]
89. si:dkey-88j15.5 si:dkey-88j15.5 48 0.825 - - - - - - - - 0.825
90. e2f4 ENSDARG00000101578, ENSDARG00000109320 1783 0.825 - 0.825 - - - - - - - E2F transcription factor 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2773]
91. eva1bb ENSDARG00000100698 223 0.824 - - - - - - - - 0.824 eva-1 homolog Bb (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-080204-108]
92. arl10 37 0.824 - - - - - - - - 0.824 ADP-ribosylation factor-like 10
93. htr1fa ENSDARG00000002773, ENSDARG00000109862 38 0.824 - - - - - - - - 0.824 5-hydroxytryptamine (serotonin) receptor 1Fa [Source:ZFIN;Acc:ZDB-GENE-081105-125]
94. COMP 2018 0.824 - - - - - - 0.824 - - cartilage oligomeric matrix protein, transcript variant X1
95. pgm5 ENSDARG00000060745, ENSDARG00000114684 1083 0.824 - - - - - - 0.824 - - phosphoglucomutase 5 [Source:ZFIN;Acc:ZDB-GENE-060503-838]
96. POMK ENSDARG00000003208, ENSDARG00000112152 529 0.823 - - - - - - - - 0.823 protein-O-mannose kinase [Source:ZFIN;Acc:ZDB-GENE-041114-119]
97. arl15a ENSDARG00000076040, ENSDARG00000114295 41 0.823 - - - - - - - - 0.823 ADP-ribosylation factor-like 15a [Source:ZFIN;Acc:ZDB-GENE-070209-3]
98. ldlr ldlr 35 0.823 - - - - - - - - 0.823
99. stat6 ENSDARG00000015902, ENSDARG00000115859 377 0.823 - - - - - - - - 0.823 signal transducer and activator of transcription 6, interleukin-4 induced [Source:ZFIN;Acc:ZDB-GENE-030131-9359]
100. zgc:154075 ENSDARG00000067630 284 0.822 - - - - - 0.822 - - - zgc:154075 [Source:ZFIN;Acc:ZDB-GENE-060929-910]

There are 845 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA