Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for farsb

Gene Name Gene ID Reads Annotation
farsb ENSDARG00000016864 6776 phenylalanyl-tRNA synthetase subunit beta [Source:ZFIN;Acc:ZDB-GENE-021206-2]










Genes with expression patterns similar to farsb

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. farsb ENSDARG00000016864 6776 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 phenylalanyl-tRNA synthetase subunit beta [Source:ZFIN;Acc:ZDB-GENE-021206-2]
2. naa15a ENSDARG00000003213 5889 3.504 0.985 0.951 - - - 0.737 0.831 - - N(alpha)-acetyltransferase 15, NatA auxiliary subunit a [Source:ZFIN;Acc:ZDB-GENE-030131-2392]
3. ndufv2 ENSDARG00000013044 3758 2.64 0.981 0.887 - - - - 0.772 - - NADH:ubiquinone oxidoreductase core subunit V2 [Source:ZFIN;Acc:ZDB-GENE-040426-1713]
4. Sep-02 Sep-02 10074 2.624 0.961 0.941 - - - 0.722 - - -
5. ube2a ENSDARG00000098466 12765 2.615 0.877 0.891 - - - - 0.847 - - ubiquitin-conjugating enzyme E2A (RAD6 homolog) [Source:ZFIN;Acc:ZDB-GENE-030616-72]
6. dhrs7c dhrs7c 1173 2.572 0.977 - - - - 0.795 0.800 - -
7. parvb ENSDARG00000019117 1042 2.428 - 0.804 - - - 0.795 0.829 - - parvin, beta [Source:ZFIN;Acc:ZDB-GENE-030131-4411]
8. ktn1 ENSDARG00000032802 6251 2.373 - 0.844 - - - - 0.791 0.738 - kinectin 1 [Source:ZFIN;Acc:ZDB-GENE-030408-4]
9. SNRPG ENSDARG00000099667 18697 2.32 0.887 - - - - 0.705 0.728 - - small nuclear ribonucleoprotein polypeptide G [Source:ZFIN;Acc:ZDB-GENE-040912-105]
10. ndufab1a ENSDARG00000058463, ENSDARG00000112762 11317 2.265 - - 0.703 - - 0.774 0.788 - - NADH:ubiquinone oxidoreductase subunit AB1a [Source:ZFIN;Acc:ZDB-GENE-040801-1]
11. cox14 ENSDARG00000092124 2229 2.192 - - - 0.703 - 0.734 0.755 - - cytochrome c oxidase assembly factor COX14 [Source:ZFIN;Acc:ZDB-GENE-060503-626]
12. ndufa9 ndufa9 8846 1.833 0.979 - - - - - 0.854 - -
13. hspb8 ENSDARG00000058365, ENSDARG00000109236 8688 1.811 0.946 - - - - - 0.865 - - heat shock protein b8 [Source:ZFIN;Acc:ZDB-GENE-030131-2480]
14. zfand5b ENSDARG00000002271 4145 1.809 0.980 - - - - 0.829 - - - zinc finger, AN1-type domain 5b [Source:ZFIN;Acc:ZDB-GENE-040426-875]
15. rab14 ENSDARG00000074246 4084 1.8 0.978 0.822 - - - - - - - RAB14, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-030826-20]
16. C22H19orf70 C22H19orf70 4393 1.797 - 0.892 - - - - 0.905 - -
17. kpnb1 ENSDARG00000104889 9282 1.791 - 0.899 - - 0.892 - - - - karyopherin (importin) beta 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2579]
18. ppm1la ENSDARG00000063218 2142 1.78 0.978 - - - - - 0.802 - - protein phosphatase, Mg2+/Mn2+ dependent, 1La [Source:ZFIN;Acc:ZDB-GENE-061103-118]
19. MRPL47 ENSDARG00000075743, ENSDARG00000114962 10236 1.775 0.975 - - - - - 0.800 - - mitochondrial ribosomal protein L47 [Source:ZFIN;Acc:ZDB-GENE-030219-177]
20. atp5j 4272 1.774 0.962 - - - - - 0.812 - - ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6, transcript variant X2
21. ppp1cc 2361 1.771 0.977 0.794 - - - - - - - protein phosphatase 1, catalytic subunit, gamma isozyme
22. cox6c ENSDARG00000038577 16845 1.765 0.936 - - - - - 0.829 - - cytochrome c oxidase subunit 6C [Source:ZFIN;Acc:ZDB-GENE-040724-95]
23. nrp1a ENSDARG00000102153 4154 1.764 0.925 0.839 - - - - - - - neuropilin 1a [Source:ZFIN;Acc:ZDB-GENE-030519-2]
24. hypk ENSDARG00000059725 20584 1.764 0.895 - - - - - 0.869 - - huntingtin interacting protein K [Source:ZFIN;Acc:ZDB-GENE-080515-6]
25. bcl2l13 ENSDARG00000062370, ENSDARG00000111116 3206 1.764 - 0.908 - - - - 0.856 - - BCL2 like 13 [Source:ZFIN;Acc:ZDB-GENE-050419-215]
26. actc1a ENSDARG00000042535, ENSDARG00000076126, ENSDARG00000116925 6499 1.762 0.959 - - - - - 0.803 - - actin, alpha, cardiac muscle 1a [Source:ZFIN;Acc:ZDB-GENE-040520-4]
27. CDIP1 ENSDARG00000076118 1294 1.758 0.977 - - - - - 0.781 - - cell death-inducing p53 target 1 [Source:ZFIN;Acc:ZDB-GENE-070720-18]
28. sel1l ENSDARG00000004581 2246 1.752 0.976 0.776 - - - - - - - SEL1L, ERAD E3 ligase adaptor subunit [Source:ZFIN;Acc:ZDB-GENE-041001-122]
29. tmod4 ENSDARG00000020890 17436 1.747 0.801 0.946 - - - - - - - tropomodulin 4 (muscle) [Source:ZFIN;Acc:ZDB-GENE-991019-9]
30. PTPLA PTPLA 4044 1.741 - - - - - 0.868 0.873 - -
31. trim63 trim63 2437 1.739 - - - - - 0.919 0.820 - -
32. uqcrc2a ENSDARG00000014794 3949 1.735 0.975 - - - - - 0.760 - - ubiquinol-cytochrome c reductase core protein 2a [Source:ZFIN;Acc:ZDB-GENE-040718-405]
33. eif2s2 ENSDARG00000053047 15904 1.734 0.913 - - - - - 0.821 - - eukaryotic translation initiation factor 2, subunit 2 beta [Source:ZFIN;Acc:ZDB-GENE-030131-3085]
34. ivd ENSDARG00000042853, ENSDARG00000112920 1526 1.719 0.981 - - - - - 0.738 - - isovaleryl-CoA dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-030616-262]
35. chrna1 ENSDARG00000009021 2931 1.717 - - - - - 0.842 0.875 - - cholinergic receptor, nicotinic, alpha 1 (muscle) [Source:ZFIN;Acc:ZDB-GENE-980526-137]
36. vapb ENSDARG00000070435, ENSDARG00000112097 6469 1.716 - 0.895 - - - - 0.821 - - VAMP (vesicle-associated membrane protein)-associated protein B and C [Source:ZFIN;Acc:ZDB-GENE-030131-2348]
37. hspa4a ENSDARG00000004754 3439 1.714 - 0.891 - - - - 0.823 - - heat shock protein 4a [Source:ZFIN;Acc:ZDB-GENE-040426-2832]
38. srpr 5148 1.71 0.936 0.774 - - - - - - - signal recognition particle receptor (docking protein)
39. metap2b_1 ENSDARG00000102571 5507 1.699 0.795 - - - - - 0.904 - - methionyl aminopeptidase 2b [Source:ZFIN;Acc:ZDB-GENE-030131-2172]
40. pno1 ENSDARG00000008502 4547 1.698 0.986 - - - - - - 0.712 - partner of NOB1 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-1419]
41. szrd1 ENSDARG00000056338, ENSDARG00000114005 2061 1.698 0.978 - - - - - - - 0.720 SUZ RNA binding domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050522-55]
42. nxf1 ENSDARG00000055076 3251 1.697 0.979 - - - - 0.718 - - - nuclear RNA export factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2585]
43. hmgcrb ENSDARG00000105206 2080 1.697 0.977 - - - - - 0.720 - - 3-hydroxy-3-methylglutaryl-CoA reductase b [Source:ZFIN;Acc:ZDB-GENE-051108-1]
44. nktr ENSDARG00000059097 1998 1.694 0.979 - - - - 0.715 - - - natural killer cell triggering receptor [Source:ZFIN;Acc:ZDB-GENE-030131-1725]
45. rpl13a ENSDARG00000044093, ENSDARG00000116541 10473 1.692 - 0.889 - - - - 0.803 - - ribosomal protein L13a [Source:ZFIN;Acc:ZDB-GENE-030131-168]
46. nexn ENSDARG00000057317 10972 1.687 - - - - - 0.830 0.857 - - nexilin (F actin binding protein) [Source:ZFIN;Acc:ZDB-GENE-041114-92]
47. pfkmb ENSDARG00000060797, ENSDARG00000109412, ENSDARG00000109653, ENSDARG00000115422 3323 1.686 - - - - - 0.831 0.855 - - phosphofructokinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-081114-1]
48. TRIM63 TRIM63 1600 1.684 - - - - - 0.797 0.887 - -
49. smtnl1 ENSDARG00000041257 7410 1.682 - - - - - - 0.866 0.816 - smoothelin-like 1 [Source:ZFIN;Acc:ZDB-GENE-050306-23]
50. tmem182 tmem182 12589 1.672 - - - - - 0.806 0.866 - -
51. ndufv1 ENSDARG00000036438 8437 1.672 - 0.922 - - - 0.750 - - - NADH:ubiquinone oxidoreductase core subunit V1 [Source:ZFIN;Acc:ZDB-GENE-040808-73]
52. myod1 ENSDARG00000030110 6019 1.67 - - - - - 0.797 0.873 - - myogenic differentiation 1 [Source:ZFIN;Acc:ZDB-GENE-980526-561]
53. nid1a ENSDARG00000068710 3948 1.668 - - - - - 0.804 0.864 - - nidogen 1a [Source:ZFIN;Acc:ZDB-GENE-050302-58]
54. hadhaa ENSDARG00000057128 2179 1.667 - 0.893 - - - - 0.774 - - hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit alpha a [Source:ZFIN;Acc:ZDB-GENE-031222-5]
55. crls1 ENSDARG00000038000 1088 1.665 - 0.853 - - - - 0.812 - - cardiolipin synthase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2519]
56. capzb ENSDARG00000100252 10444 1.662 - - - - - 0.856 0.806 - - capping actin protein of muscle Z-line subunit beta [Source:ZFIN;Acc:ZDB-GENE-030131-7023]
57. atp1b3b ENSDARG00000042837 5163 1.662 - - - - - 0.877 0.785 - - ATPase Na+/K+ transporting subunit beta 3b [Source:ZFIN;Acc:ZDB-GENE-001127-1]
58. usp2a ENSDARG00000020107 2586 1.659 - - - - - 0.835 0.824 - - ubiquitin specific peptidase 2a [Source:ZFIN;Acc:ZDB-GENE-041212-59]
59. serbp1a_1 ENSDARG00000074242 13588 1.656 0.903 - - - - - 0.753 - - SERPINE1 mRNA binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-7389]
60. C1QBP ENSDARG00000039887 11186 1.655 - - - - - - 0.821 0.834 - complement component 1, q subcomponent binding protein [Source:ZFIN;Acc:ZDB-GENE-050417-408]
61. immt ENSDARG00000102874 3435 1.641 - - - - - 0.769 0.872 - - inner membrane protein, mitochondrial (mitofilin) [Source:ZFIN;Acc:ZDB-GENE-030131-5417]
62. hars2 hars2 1104 1.641 - 0.773 - - - - 0.868 - -
63. larsb ENSDARG00000019280 3924 1.64 - - - - - 0.819 0.821 - - leucyl-tRNA synthetase b [Source:ZFIN;Acc:ZDB-GENE-030114-7]
64. kbtbd12 ENSDARG00000001882 1196 1.635 - - - - - 0.826 0.809 - - kelch repeat and BTB (POZ) domain containing 12 [Source:ZFIN;Acc:ZDB-GENE-050904-1]
65. gyg1a ENSDARG00000011934 2276 1.634 - - - - - 0.837 0.797 - - glycogenin 1a [Source:ZFIN;Acc:ZDB-GENE-040426-2910]
66. isoc1 ENSDARG00000060069 1621 1.634 - 0.849 - - - 0.785 - - - isochorismatase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-061020-1]
67. schip1 ENSDARG00000035175 3838 1.632 - 0.857 - - - 0.775 - - - schwannomin interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-050417-466]
68. ms4a17a.14 829 1.632 - - - - - 0.815 0.817 - - membrane-spanning 4-domains, subfamily A, member 17A.14
69. uchl3 ENSDARG00000030177, ENSDARG00000109434 2843 1.631 - 0.812 - - - - 0.819 - - ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase) [Source:ZFIN;Acc:ZDB-GENE-050522-158]
70. ldb3a ENSDARG00000056322, ENSDARG00000116388 2569 1.63 - - - - - 0.813 0.817 - - LIM domain binding 3a [Source:ZFIN;Acc:ZDB-GENE-040121-6]
71. slc16a3 ENSDARG00000045051 818 1.629 - - - - - 0.810 0.819 - - solute carrier family 16 (monocarboxylate transporter), member 3 [Source:ZFIN;Acc:ZDB-GENE-030131-5487]
72. eaf2 ENSDARG00000010432 3768 1.629 - - - - - 0.732 0.897 - - ELL associated factor 2 [Source:ZFIN;Acc:ZDB-GENE-040625-179]
73. sh3bgr ENSDARG00000021633 3498 1.628 - - - - - 0.751 0.877 - - SH3 domain binding glutamate-rich protein [Source:ZFIN;Acc:ZDB-GENE-040801-27]
74. myom1a ENSDARG00000061249 10230 1.625 - - - - - 0.761 0.864 - - myomesin 1a (skelemin) [Source:ZFIN;Acc:ZDB-GENE-030131-2856]
75. si:dkey-256i11.1 si:dkey-256i11.1 3373 1.624 - 0.863 - - - 0.761 - - -
76. txnipb ENSDARG00000070000 2365 1.623 - - - - - 0.818 0.805 - - thioredoxin interacting protein b [Source:ZFIN;Acc:ZDB-GENE-040917-1]
77. stip1 ENSDARG00000004906 7742 1.622 - 0.910 - - - - 0.712 - - stress-induced phosphoprotein 1 [Source:ZFIN;Acc:ZDB-GENE-041121-17]
78. BX649282.1 ENSDARG00000105704 347 1.622 - - - - - - 0.802 0.820 -
79. mtdhb ENSDARG00000004939 1225 1.621 - - - - - 0.821 - 0.800 - metadherin b [Source:ZFIN;Acc:ZDB-GENE-090929-2]
80. zgc:92518 ENSDARG00000016343 3837 1.619 - - - - - 0.737 0.882 - - zgc:92518 [Source:ZFIN;Acc:ZDB-GENE-040718-53]
81. hspb9 ENSDARG00000078674 2755 1.619 - - - - - 0.841 0.778 - - heat shock protein, alpha-crystallin-related, 9 [Source:ZFIN;Acc:ZDB-GENE-080214-6]
82. si:ch211-255p10.3 ENSDARG00000096616 8336 1.619 - - - - - 0.833 0.786 - - si:ch211-255p10.3 [Source:ZFIN;Acc:ZDB-GENE-121214-339]
83. COQ7 ENSDARG00000062594 989 1.617 - 0.805 - - - - 0.812 - - coenzyme Q7 homolog, ubiquinone (yeast) [Source:ZFIN;Acc:ZDB-GENE-070209-262]
84. mdh1b ENSDARG00000018008 3196 1.616 - - - - - 0.742 0.874 - - malate dehydrogenase 1B, NAD (soluble) [Source:ZFIN;Acc:ZDB-GENE-060929-384]
85. prkag3b ENSDARG00000000369 1945 1.616 - - - - - - 0.765 0.851 - protein kinase, AMP-activated, gamma 3b non-catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-060421-6938]
86. rp42-pen rp42-pen 3395 1.615 - - - - - 0.808 0.807 - -
87. asb2a asb2a 845 1.614 - - - - - 0.745 0.869 - -
88. ube2v2 ENSDARG00000028198 23341 1.614 - 0.911 - - - - 0.703 - - ubiquitin-conjugating enzyme E2 variant 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2919]
89. cd248b ENSDARG00000077938 2561 1.613 - - - - - 0.762 0.851 - - CD248 molecule, endosialin b [Source:ZFIN;Acc:ZDB-GENE-050309-46]
90. pdlim3b ENSDARG00000014248, ENSDARG00000111275 708 1.603 - - - - - - 0.770 0.833 - PDZ and LIM domain 3b [Source:ZFIN;Acc:ZDB-GENE-060130-104]
91. zgc:193541 ENSDARG00000092873 21276 1.602 - - - - - 0.733 0.869 - - zgc:193541 [Source:ZFIN;Acc:ZDB-GENE-081022-15]
92. eya1 ENSDARG00000014259, ENSDARG00000116267 5111 1.602 - - - - - 0.712 0.890 - - EYA transcriptional coactivator and phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-990712-18]
93. si:ch211-242b18.1 ENSDARG00000054723 2929 1.601 - - - - - 0.795 0.806 - - si:ch211-242b18.1 [Source:ZFIN;Acc:ZDB-GENE-030131-1518]
94. rps18 ENSDARG00000100392 64615 1.598 0.751 - - - - - 0.847 - - ribosomal protein S18 [Source:ZFIN;Acc:ZDB-GENE-020419-20]
95. pa2g4a ENSDARG00000039578, ENSDARG00000115881 16166 1.597 - 0.783 - - - - 0.814 - - proliferation-associated 2G4, a [Source:ZFIN;Acc:ZDB-GENE-030616-161]
96. gypc ENSDARG00000041546 1487 1.591 - - - - - 0.736 0.855 - - glycophorin C (Gerbich blood group) [Source:ZFIN;Acc:ZDB-GENE-030131-7930]
97. usp4 ENSDARG00000014770 1684 1.59 - - - - - - 0.766 0.824 - ubiquitin specific peptidase 4 (proto-oncogene) [Source:ZFIN;Acc:ZDB-GENE-041008-187]
98. acsl1 acsl1 4216 1.589 - - - - - 0.702 0.887 - -
99. C2H1orf123 C2H1orf123 2344 1.588 - 0.823 - - - - 0.765 - -
100. ITGB1BP2 ENSDARG00000030176 2472 1.588 - - - - - 0.755 0.833 - - integrin subunit beta 1 binding protein 2 [Source:HGNC Symbol;Acc:HGNC:6154]

There are 1539 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA