Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for farp1

Gene Name Gene ID Reads Annotation
farp1 ENSDARG00000074381 406 FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived) [Source:ZFIN;Acc:ZDB-GENE-070424-163]










Genes with expression patterns similar to farp1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. farp1 ENSDARG00000074381 406 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived) [Source:ZFIN;Acc:ZDB-GENE-070424-163]
2. amot ENSDARG00000078335 1757 1.962 - 0.994 - - 0.968 - - - - angiomotin [Source:ZFIN;Acc:ZDB-GENE-030131-7487]
3. CNOT2 ENSDARG00000061802 1500 1.952 - 0.991 - - 0.961 - - - - CCR4-NOT transcription complex, subunit 2 [Source:ZFIN;Acc:ZDB-GENE-070410-70]
4. arhgef1b ENSDARG00000055837 2330 1.936 - 0.965 - - 0.971 - - - - Rho guanine nucleotide exchange factor (GEF) 1b [Source:ZFIN;Acc:ZDB-GENE-060616-136]
5. cdc42se1 ENSDARG00000023724 3901 1.919 - 0.979 - - 0.940 - - - - CDC42 small effector 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9260]
6. rcn1 ENSDARG00000070006 8455 1.843 - 0.900 - - 0.943 - - - - reticulocalbin 1, EF-hand calcium binding domain [Source:ZFIN;Acc:ZDB-GENE-080225-33]
7. nop16 ENSDARG00000044402 3645 1.827 - 0.967 - - 0.860 - - - - NOP16 nucleolar protein homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040718-267]
8. tmem110 497 1.821 - 1.000 - - - 0.821 - - - transmembrane protein 110
9. nucb2b ENSDARG00000036291 911 1.81 - 0.999 - - - 0.811 - - - nucleobindin 2b [Source:ZFIN;Acc:ZDB-GENE-030131-4775]
10. rhoad rhoad 8007 1.735 - 0.936 - - 0.799 - - - -
11. nol8 ENSDARG00000044143 425 1.733 - - - - 0.997 0.736 - - - nucleolar protein 8 [Source:ZFIN;Acc:ZDB-GENE-050208-491]
12. fbxl5 ENSDARG00000043046 1403 1.727 - - - - 0.955 0.772 - - - F-box and leucine-rich repeat protein 5 [Source:ZFIN;Acc:ZDB-GENE-030131-900]
13. smc3 ENSDARG00000019000, ENSDARG00000112055 6553 1.72 - 0.957 - - 0.763 - - - - structural maintenance of chromosomes 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3196]
14. sh3bp5lb 1090 1.72 - - - - 0.994 - 0.726 - - SH3-binding domain protein 5-like, b
15. il1rapl1a ENSDARG00000062045, ENSDARG00000115285 1200 1.703 - - - - 0.997 - 0.706 - - interleukin 1 receptor accessory protein-like 1a [Source:ZFIN;Acc:ZDB-GENE-061013-249]
16. arrb2b ENSDARG00000011545 3126 1.703 - - - - 0.942 0.761 - - - arrestin, beta 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1332]
17. nkx6.2 ENSDARG00000104735 5081 1.702 - 0.992 - - 0.710 - - - - NK6 homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-070626-1]
18. BX294434.1 ENSDARG00000061272 6493 1.676 - - - - 0.971 - 0.705 - - solute carrier family 41 member 1 [Source:NCBI gene;Acc:564564]
19. bloc1s6 ENSDARG00000042933 2978 1.675 - 0.900 - - - 0.775 - - - biogenesis of lysosomal organelles complex-1, subunit 6, pallidin [Source:ZFIN;Acc:ZDB-GENE-070112-1862]
20. COMP 2018 1.668 - 0.967 - - - - 0.701 - - cartilage oligomeric matrix protein, transcript variant X1
21. bin1 bin1 3199 1.663 - 0.897 - - - - 0.766 - -
22. pdap1a ENSDARG00000092546, ENSDARG00000116115 7617 1.653 - 0.944 - - - 0.709 - - - pdgfa associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1693]
23. fubp1 ENSDARG00000029248 15259 1.64 - 0.875 - - 0.765 - - - - far upstream element (FUSE) binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2159]
24. usp40 ENSDARG00000071197 825 1.589 - - - - - 0.810 0.779 - - ubiquitin specific peptidase 40 [Source:ZFIN;Acc:ZDB-GENE-060518-5]
25. tnw 16679 1.421 - - - - 0.720 - 0.701 - - tenascin W, transcript variant X2
26. prkab1a ENSDARG00000044183 264 1 - 1.000 - - - - - - - protein kinase, AMP-activated, beta 1 non-catalytic subunit, a [Source:ZFIN;Acc:ZDB-GENE-040718-377]
27. olfm2a ENSDARG00000077847 230 1 - 1.000 - - - - - - - olfactomedin 2a [Source:ZFIN;Acc:ZDB-GENE-040426-2882]
28. ENSDARG00000096553 ENSDARG00000096553 388 1 - 1.000 - - - - - - -
29. ncam1b ENSDARG00000007220 233 1 - 1.000 - - - - - - - neural cell adhesion molecule 1b [Source:ZFIN;Acc:ZDB-GENE-010822-2]
30. nrd1 nrd1 324 1 - 1.000 - - - - - - -
31. acmsd ENSDARG00000062549 201 1 - 1.000 - - - - - - - aminocarboxymuconate semialdehyde decarboxylase [Source:ZFIN;Acc:ZDB-GENE-070410-103]
32. sgce ENSDARG00000012138 912 1 - 1.000 - - - - - - - sarcoglycan, epsilon [Source:ZFIN;Acc:ZDB-GENE-030724-1]
33. mxf ENSDARG00000026049 195 1 - 1.000 - - - - - - - myxovirus (influenza virus) resistance F [Source:ZFIN;Acc:ZDB-GENE-030721-9]
34. prmt6 ENSDARG00000069706 484 1 - 1.000 - - - - - - - protein arginine methyltransferase 6 [Source:ZFIN;Acc:ZDB-GENE-040914-7]
35. kif3a ENSDARG00000087538, ENSDARG00000109880, ENSDARG00000117005 1216 1 - 1.000 - - - - - - - kinesin family member 3A [Source:ZFIN;Acc:ZDB-GENE-050417-71]
36. C13H10orf54 C13H10orf54 450 1 - 1.000 - - - - - - -
37. si:ch211-133l11.10 ENSDARG00000005626 381 1 - 1.000 - - - - - - - si:ch211-133l11.10 [Source:ZFIN;Acc:ZDB-GENE-141219-14]
38. dnajb5 ENSDARG00000052881, ENSDARG00000116664 885 1 - 1.000 - - - - - - - DnaJ (Hsp40) homolog, subfamily B, member 5 [Source:ZFIN;Acc:ZDB-GENE-070705-308]
39. ypel1 ENSDARG00000035630, ENSDARG00000112717 739 1 - 1.000 - - - - - - - yippee-like 1 [Source:ZFIN;Acc:ZDB-GENE-040808-41]
40. si:ch211-271g18.4 ENSDARG00000115564 197 1 - 1.000 - - - - - - - si:ch211-271g18.4 [Source:ZFIN;Acc:ZDB-GENE-110914-58]
41. HEATR6 ENSDARG00000073686 241 1 - 1.000 - - - - - - - HEAT repeat containing 6 [Source:ZFIN;Acc:ZDB-GENE-080204-118]
42. GRAMD1B GRAMD1B 311 1 - 1.000 - - - - - - -
43. kdm8 ENSDARG00000102512 321 1 - 1.000 - - - - - - - lysine (K)-specific demethylase 8 [Source:ZFIN;Acc:ZDB-GENE-040718-411]
44. CTIF ENSDARG00000090617 270 1 - 1.000 - - - - - - - CBP80/20-dependent translation initiation factor [Source:ZFIN;Acc:ZDB-GENE-130530-1003]
45. traf4b ENSDARG00000038964 346 0.999 - 0.999 - - - - - - - tnf receptor-associated factor 4b [Source:ZFIN;Acc:ZDB-GENE-040305-2]
46. adm2a ENSDARG00000045708, ENSDARG00000111740 246 0.999 - 0.999 - - - - - - - adrenomedullin 2a [Source:ZFIN;Acc:ZDB-GENE-041210-100]
47. ITFG1 ENSDARG00000075584, ENSDARG00000110264 615 0.999 - 0.999 - - - - - - - integrin alpha FG-GAP repeat containing 1 [Source:ZFIN;Acc:ZDB-GENE-121003-3]
48. supt20 ENSDARG00000078658 713 0.999 - 0.999 - - - - - - - SPT20 homolog, SAGA complex component [Source:ZFIN;Acc:ZDB-GENE-091204-264]
49. CR293507.1 ENSDARG00000112572 3198 0.999 - 0.999 - - - - - - -
50. si:ch211-129c21.1 ENSDARG00000024775 371 0.999 - 0.999 - - - - - - - si:ch211-129c21.1 [Source:ZFIN;Acc:ZDB-GENE-030131-5796]
51. pah ENSDARG00000020143 1551 0.999 - 0.999 - - - - - - - phenylalanine hydroxylase [Source:ZFIN;Acc:ZDB-GENE-031006-2]
52. zgc:171759_4 ENSDARG00000100259, ENSDARG00000109737, ENSDARG00000111964, ENSDARG00000114195, ENSDARG00000115938 327 0.999 - 0.999 - - - - - - - zgc:171759 [Source:ZFIN;Acc:ZDB-GENE-071004-32]
53. STARD7 ENSDARG00000074858 889 0.999 - 0.999 - - - - - - - StAR-related lipid transfer (START) domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-030131-2310]
54. zgc:113625 ENSDARG00000054160 276 0.998 - 0.998 - - - - - - - zgc:113625 [Source:ZFIN;Acc:ZDB-GENE-050320-47]
55. sepsecs ENSDARG00000033861 478 0.998 - - - - 0.998 - - - - Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase [Source:ZFIN;Acc:ZDB-GENE-040426-859]
56. KIF2A ENSDARG00000043571 1560 0.998 - 0.998 - - - - - - - kinesin family member 2A [Source:HGNC Symbol;Acc:HGNC:6318]
57. atoh8 ENSDARG00000037555, ENSDARG00000110248 2059 0.998 - 0.998 - - - - - - - atonal bHLH transcription factor 8 [Source:ZFIN;Acc:ZDB-GENE-061215-7]
58. Mar-01 Mar-01 176 0.998 - - - - 0.998 - - - -
59. aatkb ENSDARG00000104442 392 0.998 - - - - 0.998 - - - - apoptosis-associated tyrosine kinase b [Source:ZFIN;Acc:ZDB-GENE-100812-6]
60. exoc1 ENSDARG00000043019 819 0.998 - 0.998 - - - - - - - exocyst complex component 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1057]
61. tbc1d23 ENSDARG00000044357, ENSDARG00000109696 6272 0.998 - 0.998 - - - - - - - TBC1 domain family, member 23 [Source:ZFIN;Acc:ZDB-GENE-040426-1253]
62. gtf2f1 ENSDARG00000032129 3041 0.998 - 0.998 - - - - - - - general transcription factor IIF, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4557]
63. tmem135 ENSDARG00000069157 918 0.998 - - - - 0.998 - - - - transmembrane protein 135 [Source:ZFIN;Acc:ZDB-GENE-070424-70]
64. tbx19 ENSDARG00000079187 133 0.998 - - - - 0.998 - - - - T-box 19 [Source:ZFIN;Acc:ZDB-GENE-110411-5]
65. SLC6A16_1 SLC6A16_1 1130 0.998 - 0.998 - - - - - - -
66. sec14l1 ENSDARG00000098821, ENSDARG00000103991 1004 0.998 - 0.998 - - - - - - - SEC14-like lipid binding 1 [Source:ZFIN;Acc:ZDB-GENE-040426-801]
67. bcl6a ENSDARG00000070864, ENSDARG00000111395, ENSDARG00000112502, ENSDARG00000116260 657 0.998 - 0.998 - - - - - - - B-cell CLL/lymphoma 6a (zinc finger protein 51) [Source:ZFIN;Acc:ZDB-GENE-040426-1696]
68. BX548000.3 BX548000.3 241 0.998 - - - - 0.998 - - - -
69. gle1 ENSDARG00000043559 1362 0.998 - 0.998 - - - - - - - GLE1 RNA export mediator homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040831-4]
70. CABZ01057907.1 CABZ01057907.1 1140 0.998 - 0.998 - - - - - - -
71. SMARCA1 ENSDARG00000012776 673 0.998 - 0.998 - - - - - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 [Source:ZFIN;Acc:ZDB-GENE-070705-296]
72. CASK CASK 1750 0.998 - 0.998 - - - - - - -
73. zgc:113208 ENSDARG00000035610, ENSDARG00000109302 1095 0.998 - 0.998 - - - - - - - zgc:113208 [Source:ZFIN;Acc:ZDB-GENE-050417-450]
74. wu:fb12e11 wu:fb12e11 2332 0.998 - 0.998 - - - - - - -
75. mapk12a ENSDARG00000042021 1573 0.998 - 0.998 - - - - - - - mitogen-activated protein kinase 12a [Source:ZFIN;Acc:ZDB-GENE-990415-257]
76. zgc:171759_5 ENSDARG00000100259, ENSDARG00000109737, ENSDARG00000111964, ENSDARG00000114195, ENSDARG00000115938 274 0.998 - - - - 0.998 - - - - zgc:171759 [Source:ZFIN;Acc:ZDB-GENE-071004-32]
77. SLC12A6 SLC12A6 883 0.998 - 0.998 - - - - - - -
78. CR933820.2 CR933820.2 152 0.998 - - - - 0.998 - - - -
79. rassf10a 417 0.998 - - - - 0.998 - - - - Ras association (RalGDS/AF-6) domain family (N-terminal) member 10a
80. snx16 ENSDARG00000046072 931 0.998 - 0.998 - - - - - - - sorting nexin 16 [Source:ZFIN;Acc:ZDB-GENE-040426-1832]
81. PDPR ENSDARG00000103288 711 0.998 - 0.998 - - - - - - - pyruvate dehydrogenase phosphatase regulatory subunit [Source:HGNC Symbol;Acc:HGNC:30264]
82. lpar2b ENSDARG00000042561 1086 0.997 - 0.997 - - - - - - - lysophosphatidic acid receptor 2b [Source:ZFIN;Acc:ZDB-GENE-051120-99]
83. uck2a ENSDARG00000006074 1554 0.997 - 0.997 - - - - - - - uridine-cytidine kinase 2a [Source:ZFIN;Acc:ZDB-GENE-030131-7158]
84. CHD6 ENSDARG00000017244 219 0.997 - - - - 0.997 - - - - chromodomain helicase DNA binding protein 6 [Source:ZFIN;Acc:ZDB-GENE-130530-559]
85. wfikkn2a ENSDARG00000013460 859 0.997 - - - - 0.997 - - - - info WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-120914-1]
86. paqr3b ENSDARG00000044253, ENSDARG00000110049 381 0.997 - - - - 0.997 - - - - progestin and adipoQ receptor family member IIIb [Source:ZFIN;Acc:ZDB-GENE-050913-128]
87. tgfb3 ENSDARG00000019367 2327 0.997 - 0.997 - - - - - - - transforming growth factor, beta 3 [Source:ZFIN;Acc:ZDB-GENE-030723-4]
88. pcdh18a ENSDARG00000089805 1096 0.997 - - - - 0.997 - - - - protocadherin 18a [Source:ZFIN;Acc:ZDB-GENE-000607-1]
89. C8H1orf174 C8H1orf174 372 0.997 - - - - 0.997 - - - -
90. si:ch211-282k23.2 ENSDARG00000093591 447 0.997 - - - - 0.997 - - - - si:ch211-282k23.2 [Source:ZFIN;Acc:ZDB-GENE-050420-314]
91. marveld2a ENSDARG00000025076 917 0.997 - 0.997 - - - - - - - MARVEL domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-050411-59]
92. plrg1 ENSDARG00000037283, ENSDARG00000110921 1552 0.997 - 0.997 - - - - - - - pleiotropic regulator 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2787]
93. ahr2 ENSDARG00000021833 762 0.997 - 0.997 - - - - - - - aryl hydrocarbon receptor 2 [Source:ZFIN;Acc:ZDB-GENE-990714-16]
94. tpcn1 ENSDARG00000062362 563 0.996 - - - - 0.996 - - - - two pore segment channel 1 [Source:ZFIN;Acc:ZDB-GENE-060526-199]
95. tnfaip8l2b ENSDARG00000046148 1133 0.996 - 0.996 - - - - - - - tumor necrosis factor, alpha-induced protein 8-like 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1359]
96. esrrb ENSDARG00000100847 636 0.996 - - - - 0.996 - - - - estrogen-related receptor beta [Source:ZFIN;Acc:ZDB-GENE-040616-2]
97. zc3h15 ENSDARG00000015889 3861 0.996 - 0.996 - - - - - - - zinc finger CCCH-type containing 15 [Source:ZFIN;Acc:ZDB-GENE-030131-6239]
98. lemd3 ENSDARG00000015824 2868 0.996 - 0.996 - - - - - - - LEM domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-030131-490]
99. ikbkb ENSDARG00000079123 498 0.996 - - - - 0.996 - - - - inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta [Source:ZFIN;Acc:ZDB-GENE-071115-2]
100. pole3 ENSDARG00000008551, ENSDARG00000111677, ENSDARG00000114995 485 0.996 - - - - 0.996 - - - - polymerase (DNA directed), epsilon 3 (p17 subunit) [Source:ZFIN;Acc:ZDB-GENE-040426-1773]

There are 879 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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