Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for fam3a

Gene Name Gene ID Reads Annotation
fam3a ENSDARG00000070675, ENSDARG00000115910 1377 family with sequence similarity 3, member A [Source:ZFIN;Acc:ZDB-GENE-040426-1772]










Genes with expression patterns similar to fam3a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. fam3a ENSDARG00000070675, ENSDARG00000115910 1377 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 family with sequence similarity 3, member A [Source:ZFIN;Acc:ZDB-GENE-040426-1772]
2. rnf13 ENSDARG00000019438 1560 1.962 0.971 - - - - 0.991 - - - ring finger protein 13 [Source:ZFIN;Acc:ZDB-GENE-040426-772]
3. gpx1a ENSDARG00000018146, ENSDARG00000114736 4652 1.901 0.910 - - - - 0.991 - - - glutathione peroxidase 1a [Source:ZFIN;Acc:ZDB-GENE-030410-1]
4. smim7 ENSDARG00000074848 1260 1.831 - 0.837 - - - 0.994 - - - small integral membrane protein 7 [Source:ZFIN;Acc:ZDB-GENE-060810-180]
5. sox7 ENSDARG00000030125 806 1.803 - 0.809 - - - 0.994 - - - SRY (sex determining region Y)-box 7 [Source:ZFIN;Acc:ZDB-GENE-040109-4]
6. axin2 ENSDARG00000100149 4223 1.762 - - - - - 0.988 0.774 - - axin 2 (conductin, axil) [Source:ZFIN;Acc:ZDB-GENE-000403-2]
7. mlst8 ENSDARG00000003167, ENSDARG00000116280 541 1.754 - 0.759 - - - 0.995 - - - MTOR associated protein, LST8 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-6176]
8. fam21c 1768 1.737 0.745 - - - - 0.992 - - - family with sequence similarity 21, member C, transcript variant X6
9. zgc:110333 ENSDARG00000040628 3250 1.731 - - - - - 0.983 0.748 - - zgc:110333 [Source:ZFIN;Acc:ZDB-GENE-050417-331]
10. dmrt2a ENSDARG00000015072, ENSDARG00000113160 895 1.73 - 0.737 - - - 0.993 - - - doublesex and mab-3 related transcription factor 2a [Source:ZFIN;Acc:ZDB-GENE-990621-7]
11. gspt1l ENSDARG00000098627 8381 1.719 - 0.746 - - - 0.973 - - - G1 to S phase transition 1, like [Source:ZFIN;Acc:ZDB-GENE-030131-4009]
12. cdc42se1 ENSDARG00000023724 3901 1.71 - - - - - 0.994 0.716 - - CDC42 small effector 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9260]
13. chmp2bb ENSDARG00000002190 4629 1.708 - - - - - 0.943 0.765 - - charged multivesicular body protein 2Bb [Source:ZFIN;Acc:ZDB-GENE-040426-2539]
14. SLC25A22 2190 1.698 - - - - - 0.981 0.717 - - solute carrier family 25 (mitochondrial carrier: glutamate), member 22, transcript variant X2
15. klf5a 1072 1.679 - - - - - 0.956 0.723 - - Kruppel-like factor 5a
16. dlgap4a ENSDARG00000060849 1813 1.673 0.816 0.857 - - - - - - - discs, large (Drosophila) homolog-associated protein 4a [Source:ZFIN;Acc:ZDB-GENE-080219-51]
17. gpx4b ENSDARG00000076836 8085 1.668 - - - - - 0.947 0.721 - - glutathione peroxidase 4b [Source:ZFIN;Acc:ZDB-GENE-030410-3]
18. OTTDARG00000032278 OTTDARG00000032278 1016 1.652 0.807 0.845 - - - - - - -
19. TRIM14 TRIM14 1424 1.596 - 0.775 - - - 0.821 - - -
20. surf1 ENSDARG00000003592 551 1.59 0.864 0.726 - - - - - - - surfeit 1 [Source:ZFIN;Acc:ZDB-GENE-041108-2]
21. PLEKHH3 ENSDARG00000070174 2117 1.555 0.829 0.726 - - - - - - - pleckstrin homology, MyTH4 and FERM domain containing H3 [Source:HGNC Symbol;Acc:HGNC:26105]
22. MRPL18 ENSDARG00000060199, ENSDARG00000110565, ENSDARG00000112114 1364 1.553 0.738 0.815 - - - - - - - mitochondrial ribosomal protein L18 [Source:ZFIN;Acc:ZDB-GENE-061013-632]
23. zgc:136892 ENSDARG00000069505 365 1.529 0.739 0.790 - - - - - - - zgc:136892 [Source:ZFIN;Acc:ZDB-GENE-060421-4745]
24. clica clica 6206 1.525 - 0.746 - - - 0.779 - - -
25. ppp1r13l ENSDARG00000013777 2260 1.524 - 0.816 - - - - 0.708 - - protein phosphatase 1, regulatory subunit 13 like [Source:ZFIN;Acc:ZDB-GENE-050327-33]
26. PRSS23 ENSDARG00000055786 564 1.516 0.808 0.708 - - - - - - - serine protease 23 [Source:ZFIN;Acc:ZDB-GENE-030131-9149]
27. SIRT5 ENSDARG00000039684 1124 1.501 0.789 - - - - - 0.712 - - sirtuin 5 [Source:ZFIN;Acc:ZDB-GENE-040718-349]
28. dennd4c ENSDARG00000102766 897 1.493 - 0.721 - - - - 0.772 - - DENN/MADD domain containing 4C [Source:ZFIN;Acc:ZDB-GENE-120727-13]
29. zfp36l2 ENSDARG00000021806, ENSDARG00000116819 2176 1.492 - 0.748 - - - - 0.744 - - zinc finger protein 36, C3H type-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5873]
30. TMEM261 TMEM261 6529 1.481 0.743 0.738 - - - - - - -
31. pxn_1 pxn_1 3991 1.476 - 0.721 - - - - 0.755 - -
32. arcn1a ENSDARG00000002792 2847 1.476 0.733 - - - - - 0.743 - - archain 1a [Source:ZFIN;Acc:ZDB-GENE-021031-2]
33. C19H18orf21_1 C19H18orf21_1 1657 1.467 - 0.729 - - - - 0.738 - -
34. ATOX1 ENSDARG00000087693 4016 1.466 - 0.714 - - - - 0.752 - - antioxidant 1 copper chaperone [Source:ZFIN;Acc:ZDB-GENE-120720-2]
35. XPR1 XPR1 3354 1.462 0.738 0.724 - - - - - - -
36. ywhaz ENSDARG00000032575 15257 1.431 - - - - - 0.708 0.723 - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide [Source:ZFIN;Acc:ZDB-GENE-030131-8554]
37. RAB11FIP5 RAB11FIP5 626 0.997 - - - - - 0.997 - - -
38. dnah9l ENSDARG00000062630 268 0.997 - - - - - 0.997 - - - dynein, axonemal, heavy polypeptide 9 like [Source:ZFIN;Acc:ZDB-GENE-050506-1]
39. prc1a ENSDARG00000100918 1746 0.997 - - - - - 0.997 - - - protein regulator of cytokinesis 1a [Source:ZFIN;Acc:ZDB-GENE-020801-3]
40. peli2 ENSDARG00000029045 844 0.996 - - - - - 0.996 - - - pellino E3 ubiquitin protein ligase family member 2 [Source:ZFIN;Acc:ZDB-GENE-040718-360]
41. cyp20a1 ENSDARG00000006040 2570 0.996 - - - - - 0.996 - - - cytochrome P450, family 20, subfamily A, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2646]
42. si:dkey-221j11.3 ENSDARG00000093304 1001 0.996 - - - - - 0.996 - - - si:dkey-221j11.3 [Source:ZFIN;Acc:ZDB-GENE-090313-247]
43. mtmr2 ENSDARG00000004616 1052 0.996 - - - - - 0.996 - - - myotubularin related protein 2 [Source:ZFIN;Acc:ZDB-GENE-990715-14]
44. BSCL2 ENSDARG00000037008 689 0.996 - - - - - 0.996 - - - Berardinelli-Seip congenital lipodystrophy 2 (seipin) [Source:ZFIN;Acc:ZDB-GENE-051113-140]
45. CABZ01035189.1 CABZ01035189.1 1070 0.996 - - - - - 0.996 - - -
46. oacyl ENSDARG00000075191 351 0.996 - - - - - 0.996 - - - O-acyltransferase like [Source:ZFIN;Acc:ZDB-GENE-090710-2]
47. iqsec2 iqsec2 304 0.996 - - - - - 0.996 - - -
48. sec62 ENSDARG00000019951 3724 0.996 - - - - - 0.996 - - - SEC62 homolog, preprotein translocation factor [Source:ZFIN;Acc:ZDB-GENE-050913-83]
49. epc1 epc1 1164 0.996 - - - - - 0.996 - - -
50. zgc:77391 zgc:77391 1445 0.996 - - - - - 0.996 - - -
51. irs2 irs2 392 0.995 - - - - - 0.995 - - -
52. crfb17 511 0.995 - - - - - 0.995 - - - cytokine receptor family member B17
53. igbp1 ENSDARG00000002184, ENSDARG00000117141 879 0.995 - - - - - 0.995 - - - immunoglobulin (CD79A) binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2928]
54. gk5 ENSDARG00000062864 738 0.995 - - - - - 0.995 - - - glycerol kinase 5 [Source:ZFIN;Acc:ZDB-GENE-061110-49]
55. ins ENSDARG00000035350, ENSDARG00000116735 317 0.995 - - - - - 0.995 - - - preproinsulin [Source:ZFIN;Acc:ZDB-GENE-980526-110]
56. kcna1 kcna1 174 0.995 - - - - - 0.995 - - -
57. FAM117A_1 FAM117A_1 360 0.995 - - - - - 0.995 - - -
58. chmp4c ENSDARG00000007418, ENSDARG00000110750 729 0.995 - - - - - 0.995 - - - charged multivesicular body protein 4C [Source:ZFIN;Acc:ZDB-GENE-050417-389]
59. eif4g3b ENSDARG00000074331, ENSDARG00000116386 1155 0.995 - - - - - 0.995 - - - eukaryotic translation initiation factor 4 gamma, 3b [Source:ZFIN;Acc:ZDB-GENE-090312-49]
60. MON1B_1 MON1B_1 697 0.995 - - - - - 0.995 - - -
61. mier1a ENSDARG00000041072 1690 0.995 - - - - - 0.995 - - - mesoderm induction early response 1a, transcriptional regulator [Source:ZFIN;Acc:ZDB-GENE-030131-409]
62. C13H9orf72 C13H9orf72 2310 0.995 - - - - - 0.995 - - -
63. CU571255.1 CU571255.1 902 0.995 - - - - - 0.995 - - -
64. eif2ak1 ENSDARG00000093182, ENSDARG00000112267 695 0.995 - - - - - 0.995 - - - eukaryotic translation initiation factor 2-alpha kinase 1 [Source:ZFIN;Acc:ZDB-GENE-061013-268]
65. cradd ENSDARG00000028192 153 0.995 - - - - - 0.995 - - - CASP2 and RIPK1 domain containing adaptor with death domain [Source:ZFIN;Acc:ZDB-GENE-041010-168]
66. nom1 ENSDARG00000060027, ENSDARG00000112720 831 0.995 - - - - - 0.995 - - - nucleolar protein with MIF4G domain 1 [Source:ZFIN;Acc:ZDB-GENE-060503-321]
67. PHYHIP ENSDARG00000116497 456 0.995 - - - - - 0.995 - - - phytanoyl-CoA 2-hydroxylase interacting protein [Source:NCBI gene;Acc:100002455]
68. orc4 ENSDARG00000101161 1081 0.995 - - - - - 0.995 - - - origin recognition complex, subunit 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2224]
69. DUSP13_1 DUSP13_1 425 0.995 - - - - - 0.995 - - -
70. txnl4a ENSDARG00000036190 2048 0.995 - - - - - 0.995 - - - thioredoxin-like 4A [Source:ZFIN;Acc:ZDB-GENE-041010-25]
71. dus3l ENSDARG00000099528 1192 0.994 - - - - - 0.994 - - - dihydrouridine synthase 3-like (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-1260]
72. CABZ01041962.1 ENSDARG00000076082 690 0.994 - - - - - 0.994 - - - uncharacterized LOC798124 [Source:NCBI gene;Acc:798124]
73. cwc22 ENSDARG00000014008 2385 0.994 - - - - - 0.994 - - - CWC22 spliceosome-associated protein homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-060929-452]
74. MAP1S_1 MAP1S_1 1117 0.994 - - - - - 0.994 - - -
75. ints2 ENSDARG00000069085, ENSDARG00000101876 1249 0.994 - - - - - 0.994 - - - integrator complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-050522-148]
76. ldlrap1a ENSDARG00000004311 1429 0.994 - - - - - 0.994 - - - low density lipoprotein receptor adaptor protein 1a [Source:ZFIN;Acc:ZDB-GENE-030328-13]
77. fbxo11a_1 ENSDARG00000061631, ENSDARG00000102294, ENSDARG00000112746 10566 0.994 - - - - - 0.994 - - - F-box protein 11a [Source:ZFIN;Acc:ZDB-GENE-061103-70]
78. phb2 phb2 3209 0.994 - - - - - 0.994 - - -
79. dot1l ENSDARG00000061992 602 0.994 - - - - - 0.994 - - - DOT1-like histone H3K79 methyltransferase [Source:ZFIN;Acc:ZDB-GENE-060503-341]
80. TTYH3 TTYH3 1841 0.994 - - - - - 0.994 - - -
81. BX322787.1 ENSDARG00000105779 381 0.994 - - - - - 0.994 - - -
82. efcab7 ENSDARG00000020279 1030 0.994 - - - - - 0.994 - - - EF-hand calcium binding domain 7 [Source:ZFIN;Acc:ZDB-GENE-040625-115]
83. si:ch211-232i5.1 ENSDARG00000078072 1337 0.994 - - - - - 0.994 - - - si:ch211-232i5.1 [Source:ZFIN;Acc:ZDB-GENE-070705-127]
84. dusp8a ENSDARG00000009299 1302 0.994 - - - - - 0.994 - - - dual specificity phosphatase 8a [Source:ZFIN;Acc:ZDB-GENE-040426-1842]
85. pnisr ENSDARG00000069855, ENSDARG00000116449 3465 0.994 - - - - - 0.994 - - - PNN-interacting serine/arginine-rich protein [Source:ZFIN;Acc:ZDB-GENE-030131-362]
86. RMDN2 ENSDARG00000078761 717 0.993 - - - - - 0.993 - - - regulator of microtubule dynamics 2 [Source:ZFIN;Acc:ZDB-GENE-111223-1]
87. fbxl22 ENSDARG00000096995 1290 0.993 - - - - - 0.993 - - - F-box and leucine-rich repeat protein 22 [Source:ZFIN;Acc:ZDB-GENE-050227-1]
88. rbm15 ENSDARG00000073847, ENSDARG00000110499 1307 0.993 - - - - - 0.993 - - - RNA binding motif protein 15 [Source:ZFIN;Acc:ZDB-GENE-041008-192]
89. zfand5a ENSDARG00000018898 3308 0.993 - - - - - 0.993 - - - zinc finger, AN1-type domain 5a [Source:ZFIN;Acc:ZDB-GENE-040426-1979]
90. zgc:153924 507 0.993 - - - - - 0.993 - - - zgc:153924
91. tmed7 ENSDARG00000046022 2435 0.993 - - - - - 0.993 - - - transmembrane p24 trafficking protein 7 [Source:ZFIN;Acc:ZDB-GENE-040426-2570]
92. SNORA21 SNORA21 547 0.993 - - - - - 0.993 - - -
93. znf280d ENSDARG00000077013 1387 0.993 - - - - - 0.993 - - - zinc finger protein 280D [Source:ZFIN;Acc:ZDB-GENE-030131-2260]
94. mmgt1 ENSDARG00000010553, ENSDARG00000109407 2992 0.993 - - - - - 0.993 - - - membrane magnesium transporter 1 [Source:ZFIN;Acc:ZDB-GENE-040801-65]
95. ppp1r14aa ENSDARG00000011239 980 0.993 - - - - - 0.993 - - - protein phosphatase 1, regulatory (inhibitor) subunit 14Aa [Source:ZFIN;Acc:ZDB-GENE-050417-413]
96. suv420h1 1810 0.993 - - - - - 0.993 - - - suppressor of variegation 4-20 homolog 1 (Drosophila)
97. stk38a ENSDARG00000019973 1343 0.993 - - - - - 0.993 - - - serine/threonine kinase 38a [Source:ZFIN;Acc:ZDB-GENE-040426-2811]
98. ssu72 ENSDARG00000031216 2350 0.993 - - - - - 0.993 - - - SSU72 homolog, RNA polymerase II CTD phosphatase [Source:ZFIN;Acc:ZDB-GENE-040426-1689]
99. si:dkey-9i23.16 ENSDARG00000093954 929 0.993 - - - - - 0.993 - - - si:dkey-9i23.16 [Source:ZFIN;Acc:ZDB-GENE-090313-362]
100. ssh2a ENSDARG00000088440 1149 0.993 - - - - - 0.993 - - - slingshot protein phosphatase 2a [Source:ZFIN;Acc:ZDB-GENE-030131-3810]

There are 1014 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA