Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for faf1

Gene Name Gene ID Reads Annotation
faf1 ENSDARG00000022418 2922 Fas (TNFRSF6) associated factor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2863]










Genes with expression patterns similar to faf1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. faf1 ENSDARG00000022418 2922 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Fas (TNFRSF6) associated factor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2863]
2. fkbp3 ENSDARG00000098059 5428 2.392 - - 0.734 - - 0.772 0.886 - - FK506 binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-030616-419]
3. mrpl45 ENSDARG00000044942, ENSDARG00000114416, ENSDARG00000115767 1599 2.388 - 0.718 0.944 - - - 0.726 - - mitochondrial ribosomal protein L45 [Source:ZFIN;Acc:ZDB-GENE-040426-1041]
4. pip5k1ab ENSDARG00000024642 1988 1.889 - - 0.979 - - 0.910 - - - phosphatidylinositol-4-phosphate 5-kinase, type I, alpha, b [Source:ZFIN;Acc:ZDB-GENE-041111-123]
5. tmem189 ENSDARG00000042732 4004 1.83 - - 0.977 - - 0.853 - - - transmembrane protein 189 [Source:ZFIN;Acc:ZDB-GENE-041010-150]
6. brd4 ENSDARG00000078904 5367 1.83 - - 0.955 - - 0.875 - - - bromodomain containing 4 [Source:ZFIN;Acc:ZDB-GENE-030131-267]
7. sh3rf1 ENSDARG00000070470 1463 1.813 - - 0.975 - - 0.838 - - - SH3 domain containing ring finger 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6288]
8. vta1 ENSDARG00000013732 6072 1.807 - - 0.975 - - 0.832 - - - vesicle (multivesicular body) trafficking 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2154]
9. ZNF576 ZNF576 1447 1.804 - - 0.975 - - 0.829 - - -
10. setd8b 2528 1.802 - - 0.949 - - 0.853 - - - SET domain containing (lysine methyltransferase) 8b
11. tmed4 ENSDARG00000024954 3476 1.797 - - 0.956 - - 0.841 - - - transmembrane p24 trafficking protein 4 [Source:ZFIN;Acc:ZDB-GENE-040625-140]
12. fam135a ENSDARG00000059843 2352 1.716 - 0.733 0.983 - - - - - - family with sequence similarity 135, member A [Source:ZFIN;Acc:ZDB-GENE-080130-1]
13. rassf1 ENSDARG00000004840 1248 1.712 - - 0.978 0.734 - - - - - Ras association (RalGDS/AF-6) domain family 1 [Source:ZFIN;Acc:ZDB-GENE-040912-14]
14. rab5c ENSDARG00000026712 4733 1.71 - - 0.976 - - 0.734 - - - RAB5C, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-031118-30]
15. znf598 ENSDARG00000014945 1838 1.707 - 0.741 0.966 - - - - - - zinc finger protein 598 [Source:ZFIN;Acc:ZDB-GENE-060602-3]
16. ppapdc1b ppapdc1b 2866 1.697 - - 0.917 - - 0.780 - - -
17. srp19 ENSDARG00000035699 2624 1.69 - - 0.985 - - - 0.705 - - signal recognition particle 19 [Source:ZFIN;Acc:ZDB-GENE-040426-2657]
18. zgc:163030 ENSDARG00000069192 2963 1.69 - - 0.814 - - 0.876 - - - zgc:163030 [Source:ZFIN;Acc:ZDB-GENE-060810-77]
19. ppm1da ENSDARG00000009273 7713 1.681 - - 0.888 0.793 - - - - - protein phosphatase, Mg2+/Mn2+ dependent, 1Da [Source:ZFIN;Acc:ZDB-GENE-040426-815]
20. e2f4 ENSDARG00000101578, ENSDARG00000109320 1783 1.68 - - 0.960 - - - - - 0.720 E2F transcription factor 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2773]
21. sf3a3 ENSDARG00000100114 4511 1.674 - - 0.921 - - 0.753 - - - splicing factor 3a, subunit 3 [Source:ZFIN;Acc:ZDB-GENE-040908-1]
22. gtf2a1 ENSDARG00000011000 2026 1.667 - - 0.902 - - - 0.765 - - general transcription factor IIA, 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2694]
23. atpif1a 6030 1.667 - - 0.949 - - - 0.718 - - ATPase inhibitory factor 1a
24. mif ENSDARG00000071336 1328 1.666 - - - - - 0.933 0.733 - - macrophage migration inhibitory factor [Source:ZFIN;Acc:ZDB-GENE-080708-1]
25. si:ch211-86h15.1 ENSDARG00000074098 354 1.665 - 0.755 - - - 0.910 - - - si:ch211-86h15.1 [Source:ZFIN;Acc:ZDB-GENE-081107-38]
26. ubtf ENSDARG00000035066 4070 1.66 - - 0.946 - - - 0.714 - - upstream binding transcription factor [Source:ZFIN;Acc:ZDB-GENE-030616-252]
27. gtf2e2 ENSDARG00000012672, ENSDARG00000109689, ENSDARG00000115211 1677 1.64 - - - - - 0.894 - 0.746 - general transcription factor IIE, polypeptide 2, beta [Source:ZFIN;Acc:ZDB-GENE-030131-6794]
28. prdx3 ENSDARG00000032102, ENSDARG00000114240 10034 1.627 - - 0.892 - - - 0.735 - - peroxiredoxin 3 [Source:ZFIN;Acc:ZDB-GENE-030826-18]
29. bcas2 ENSDARG00000043631 1971 1.625 - 0.762 - - - 0.863 - - - BCAS2, pre-mRNA processing factor [Source:ZFIN;Acc:ZDB-GENE-030408-5]
30. eif2s1a ENSDARG00000005827 5992 1.623 - 0.813 - - - 0.810 - - - eukaryotic translation initiation factor 2, subunit 1 alpha a [Source:ZFIN;Acc:ZDB-GENE-030131-526]
31. suz12b ENSDARG00000098924, ENSDARG00000114239, ENSDARG00000114524 1947 1.607 - - - 0.723 - 0.884 - - - SUZ12, polycomb repressive complex 2 subunit b [Source:ZFIN;Acc:ZDB-GENE-030131-3255]
32. lin52 ENSDARG00000070833 2271 1.601 - - - - - 0.886 0.715 - - lin-52 DREAM MuvB core complex component [Source:ZFIN;Acc:ZDB-GENE-061110-82]
33. hdac3 ENSDARG00000037514, ENSDARG00000110316 1985 1.6 - - - - - 0.885 0.715 - - histone deacetylase 3 [Source:ZFIN;Acc:ZDB-GENE-040426-847]
34. pik3r2 ENSDARG00000018060, ENSDARG00000112255 3899 1.598 - 0.767 - - - 0.831 - - - phosphoinositide-3-kinase, regulatory subunit 2 (beta) [Source:ZFIN;Acc:ZDB-GENE-040309-1]
35. top1l ENSDARG00000070545 40529 1.597 - - 0.818 - - - 0.779 - - DNA topoisomerase I, like [Source:ZFIN;Acc:ZDB-GENE-060616-217]
36. ube2nb ENSDARG00000045877 4583 1.592 - 0.703 0.889 - - - - - - ubiquitin-conjugating enzyme E2Nb [Source:ZFIN;Acc:ZDB-GENE-040426-1291]
37. cdc34b ENSDARG00000012627 3879 1.589 - 0.722 - - - 0.867 - - - cell division cycle 34 homolog (S. cerevisiae) b [Source:ZFIN;Acc:ZDB-GENE-040718-439]
38. meis2b ENSDARG00000077840 5166 1.586 - - 0.810 - - 0.776 - - - Meis homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-000210-23]
39. eif3ea ENSDARG00000090697 14670 1.584 - - 0.813 - - - 0.771 - - eukaryotic translation initiation factor 3, subunit E, a [Source:ZFIN;Acc:ZDB-GENE-030131-3827]
40. mrps26 ENSDARG00000039719, ENSDARG00000117175 1514 1.579 - - - - - 0.825 0.754 - - mitochondrial ribosomal protein S26 [Source:ZFIN;Acc:ZDB-GENE-040718-115]
41. arih2 ENSDARG00000012848 7087 1.575 - - 0.867 - - - 0.708 - - ariadne homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040426-2158]
42. efna1a ENSDARG00000030326 1692 1.566 - - - - - 0.816 0.750 - - ephrin-A1a [Source:ZFIN;Acc:ZDB-GENE-040426-1135]
43. fundc1 ENSDARG00000040822 2460 1.563 - 0.821 - - - - 0.742 - - FUN14 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040718-466]
44. ash2l ENSDARG00000060392 4916 1.555 - 0.847 - - - - 0.708 - - ash2 like, histone lysine methyltransferase complex subunit [Source:ZFIN;Acc:ZDB-GENE-030131-494]
45. mcl1a ENSDARG00000009779 2058 1.549 - 0.749 - - - 0.800 - - - MCL1, BCL2 family apoptosis regulator a [Source:ZFIN;Acc:ZDB-GENE-000511-7]
46. hif1al ENSDARG00000100826 18627 1.542 - - 0.839 - - 0.703 - - - hypoxia inducible factor 1 subunit alpha, like [Source:ZFIN;Acc:ZDB-GENE-040426-1315]
47. ppih ENSDARG00000041530 2085 1.537 - 0.820 - - - - 0.717 - - peptidylprolyl isomerase H (cyclophilin H) [Source:ZFIN;Acc:ZDB-GENE-040625-127]
48. zgc:56493 ENSDARG00000031435 33407 1.521 - - - - - 0.785 0.736 - - zgc:56493 [Source:ZFIN;Acc:ZDB-GENE-030131-8581]
49. mcm4 ENSDARG00000040041 7971 1.518 - - 0.733 - - - 0.785 - - minichromosome maintenance complex component 4 [Source:ZFIN;Acc:ZDB-GENE-030131-9544]
50. ppt1 ENSDARG00000039980 1599 1.517 - - - - - 0.793 - - 0.724 palmitoyl-protein thioesterase 1 (ceroid-lipofuscinosis, neuronal 1, infantile) [Source:ZFIN;Acc:ZDB-GENE-040426-2653]
51. strbp ENSDARG00000021455 1279 1.516 - - - - - 0.790 0.726 - - spermatid perinuclear RNA binding protein [Source:ZFIN;Acc:ZDB-GENE-030729-18]
52. samm50l ENSDARG00000039681 2465 1.515 - - - - - 0.781 0.734 - - sorting and assembly machinery component 50 homolog, like [Source:ZFIN;Acc:ZDB-GENE-041114-30]
53. efnb2a ENSDARG00000020164 5262 1.515 - 0.725 0.790 - - - - - - ephrin-B2a [Source:ZFIN;Acc:ZDB-GENE-990415-67]
54. stk17b ENSDARG00000014348, ENSDARG00000114208 1447 1.514 - - - - - 0.784 0.730 - - serine/threonine kinase 17b (apoptosis-inducing) [Source:ZFIN;Acc:ZDB-GENE-040426-1499]
55. ube2v2 ENSDARG00000028198 23341 1.508 - - 0.761 - - - 0.747 - - ubiquitin-conjugating enzyme E2 variant 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2919]
56. atrx ENSDARG00000042236, ENSDARG00000112921, ENSDARG00000116878 7922 1.495 - - - - - 0.780 0.715 - - alpha thalassemia/mental retardation syndrome X-linked homolog (human) [Source:ZFIN;Acc:ZDB-GENE-030912-11]
57. zgc:100918 ENSDARG00000087243 5451 1.493 - - - - - 0.792 - 0.701 - zgc:100918 [Source:ZFIN;Acc:ZDB-GENE-040927-2]
58. CYYR1 ENSDARG00000103783 4107 1.492 - - - 0.716 - - 0.776 - - cysteine/tyrosine-rich 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2356]
59. ube2a ENSDARG00000098466 12765 1.49 - - 0.787 - - - 0.703 - - ubiquitin-conjugating enzyme E2A (RAD6 homolog) [Source:ZFIN;Acc:ZDB-GENE-030616-72]
60. emc2 ENSDARG00000003308, ENSDARG00000114541 7141 1.49 - 0.725 - - - - 0.765 - - ER membrane protein complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-040625-82]
61. rnf40 ENSDARG00000054201, ENSDARG00000114667 2440 1.486 - - - 0.771 - - 0.715 - - ring finger protein 40 [Source:ZFIN;Acc:ZDB-GENE-030131-6607]
62. mrpl48 ENSDARG00000035167 1008 1.482 - 0.709 - - - 0.773 - - - mitochondrial ribosomal protein L48 [Source:ZFIN;Acc:ZDB-GENE-041008-125]
63. CARKD 1398 1.477 - - - - - 0.762 0.715 - - carbohydrate kinase domain containing, transcript variant X7
64. pdcd10a ENSDARG00000035054, ENSDARG00000109378 2227 1.475 - 0.750 - - - 0.725 - - - programmed cell death 10a [Source:ZFIN;Acc:ZDB-GENE-040426-1432]
65. tet3 ENSDARG00000062646 6672 1.469 - - - - - 0.722 0.747 - - tet methylcytosine dioxygenase 3 [Source:ZFIN;Acc:ZDB-GENE-060526-109]
66. dbt ENSDARG00000101561, ENSDARG00000110773 1537 1.465 - - - - - 0.705 0.760 - - dihydrolipoamide branched chain transacylase E2 [Source:ZFIN;Acc:ZDB-GENE-050320-85]
67. slc40a1 ENSDARG00000000241 4882 1.448 - 0.744 - - - - 0.704 - - solute carrier family 40 (iron-regulated transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-000511-8]
68. sypl2a ENSDARG00000055307, ENSDARG00000115972 7103 1.447 - - - - - 0.719 0.728 - - synaptophysin-like 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1434]
69. med19a ENSDARG00000037392, ENSDARG00000114246 2231 1.436 - - - - - 0.723 0.713 - - mediator complex subunit 19a [Source:ZFIN;Acc:ZDB-GENE-060929-232]
70. ANKRD11 ENSDARG00000051886 10024 1.433 - 0.719 - - - - 0.714 - - ankyrin repeat domain 11 [Source:ZFIN;Acc:ZDB-GENE-030131-3932]
71. bckdk ENSDARG00000016904 3775 1.433 - - - - - 0.732 0.701 - - branched chain ketoacid dehydrogenase kinase [Source:ZFIN;Acc:ZDB-GENE-021204-1]
72. ufc1 ENSDARG00000022340 2618 1.419 - - - - - 0.705 0.714 - - ubiquitin-fold modifier conjugating enzyme 1 [Source:ZFIN;Acc:ZDB-GENE-040801-268]
73. bcl9 ENSDARG00000036687 1124 0.988 - - 0.988 - - - - - - B cell CLL/lymphoma 9 [Source:ZFIN;Acc:ZDB-GENE-090313-135]
74. zgc:112982 ENSDARG00000001829, ENSDARG00000110590, ENSDARG00000111057 2330 0.987 - - 0.987 - - - - - - zgc:112982 [Source:ZFIN;Acc:ZDB-GENE-050306-55]
75. CT027778.1 CT027778.1 265 0.986 - - 0.986 - - - - - -
76. syt11a ENSDARG00000057913 1145 0.986 - - 0.986 - - - - - - synaptotagmin XIa [Source:ZFIN;Acc:ZDB-GENE-040426-2815]
77. flr ENSDARG00000038024 562 0.986 - - 0.986 - - - - - - fleer [Source:ZFIN;Acc:ZDB-GENE-070117-2066]
78. nf1b ENSDARG00000004184 548 0.986 - - 0.986 - - - - - - neurofibromin 1b [Source:ZFIN;Acc:ZDB-GENE-091111-4]
79. syn1 ENSDARG00000060368, ENSDARG00000111164 397 0.986 - - 0.986 - - - - - - synapsin I [Source:ZFIN;Acc:ZDB-GENE-081105-93]
80. nsun2 ENSDARG00000056665 740 0.986 - - 0.986 - - - - - - NOP2/Sun RNA methyltransferase family, member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4017]
81. pcbp2 ENSDARG00000099039 4248 0.985 - - 0.985 - - - - - - poly(rC) binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-563]
82. tnikb ENSDARG00000009031 1836 0.985 - - 0.985 - - - - - - TRAF2 and NCK interacting kinase b [Source:ZFIN;Acc:ZDB-GENE-051113-320]
83. nckipsd ENSDARG00000079475 777 0.985 - - 0.985 - - - - - - NCK interacting protein with SH3 domain [Source:ZFIN;Acc:ZDB-GENE-130326-2]
84. znf259 znf259 1819 0.985 - - 0.985 - - - - - -
85. trpc4apb ENSDARG00000020647 670 0.985 - - 0.985 - - - - - - transient receptor potential cation channel, subfamily C, member 4 associated protein b [Source:ZFIN;Acc:ZDB-GENE-000330-2]
86. trim3b ENSDARG00000005397 680 0.985 - - 0.985 - - - - - - tripartite motif containing 3b [Source:ZFIN;Acc:ZDB-GENE-070112-1132]
87. dennd5a ENSDARG00000017006 3426 0.985 - - 0.985 - - - - - - DENN/MADD domain containing 5A [Source:ZFIN;Acc:ZDB-GENE-071211-1]
88. ercc2 ENSDARG00000021985 678 0.985 - - 0.985 - - - - - - excision repair cross-complementation group 2 [Source:ZFIN;Acc:ZDB-GENE-040426-997]
89. taf6l ENSDARG00000079684 1408 0.985 - - 0.985 - - - - - - TAF6-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor [Source:ZFIN;Acc:ZDB-GENE-030131-6789]
90. tmem222a ENSDARG00000069589 1766 0.984 - - 0.984 - - - - - - transmembrane protein 222a [Source:ZFIN;Acc:ZDB-GENE-050306-17]
91. g6pca.1 ENSDARG00000031616 401 0.984 - - 0.984 - - - - - - glucose-6-phosphatase a, catalytic subunit, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-031001-4]
92. ptger4b ENSDARG00000035415, ENSDARG00000109430 970 0.984 - - 0.984 - - - - - - prostaglandin E receptor 4 (subtype EP4) b [Source:ZFIN;Acc:ZDB-GENE-060531-102]
93. si:ch211-59h6.1 ENSDARG00000013022 193 0.984 - - 0.984 - - - - - - si:ch211-59h6.1 [Source:ZFIN;Acc:ZDB-GENE-091204-418]
94. ISCA2 ENSDARG00000038154 489 0.984 - - 0.984 - - - - - - iron-sulfur cluster assembly 2 [Source:ZFIN;Acc:ZDB-GENE-131121-486]
95. gpbp1l1 ENSDARG00000075569, ENSDARG00000112704 3478 0.984 - - 0.984 - - - - - - GC-rich promoter binding protein 1-like 1 [Source:ZFIN;Acc:ZDB-GENE-031118-220]
96. cttnbp2nl cttnbp2nl 166 0.984 - - 0.984 - - - - - -
97. CCDC88C ENSDARG00000053713 1026 0.984 - - 0.984 - - - - - - coiled-coil domain containing 88C [Source:ZFIN;Acc:ZDB-GENE-100419-3]
98. C22H19orf44 C22H19orf44 481 0.984 - - 0.984 - - - - - -
99. taf1 ENSDARG00000035330 912 0.984 - - 0.984 - - - - - - TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-030131-5576]
100. nprl2 ENSDARG00000059613, ENSDARG00000112631 160 0.984 - - 0.984 - - - - - - NPR2 like, GATOR1 complex subunit [Source:ZFIN;Acc:ZDB-GENE-060825-93]

There are 1261 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA