Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for f3b

Gene Name Gene ID Reads Annotation
f3b ENSDARG00000005673 240 coagulation factor IIIb [Source:ZFIN;Acc:ZDB-GENE-050417-234]










Genes with expression patterns similar to f3b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. f3b ENSDARG00000005673 240 8 1.000 1.000 1.000 1.000 1.000 - 1.000 1.000 1.000 coagulation factor IIIb [Source:ZFIN;Acc:ZDB-GENE-050417-234]
2. HMGXB4_1 HMGXB4_1 1122 1.481 - 0.768 - - - - 0.713 - -
3. megf6a ENSDARG00000079199 103 1.453 - 0.702 - 0.751 - - - - - multiple EGF-like-domains 6a [Source:ZFIN;Acc:ZDB-GENE-090312-12]
4. trim2b ENSDARG00000076174 250 0.878 - - 0.878 - - - - - - tripartite motif containing 2b [Source:ZFIN;Acc:ZDB-GENE-090312-70]
5. top1mt ENSDARG00000027824, ENSDARG00000104809 195 0.873 - - - - - - 0.873 - - DNA topoisomerase I mitochondrial [Source:ZFIN;Acc:ZDB-GENE-040624-2]
6. ENSDARG00000089986 ENSDARG00000089986 308 0.863 - - 0.863 - - - - - -
7. stk3 ENSDARG00000011312, ENSDARG00000115118 460 0.863 - 0.863 - - - - - - - serine/threonine kinase 3 (STE20 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-2845]
8. HIP1R HIP1R 490 0.86 - - - - 0.860 - - - -
9. fam155a ENSDARG00000075858 91 0.859 - - - - - - 0.859 - - family with sequence similarity 155, member A [Source:ZFIN;Acc:ZDB-GENE-090313-34]
10. CR382298.3 CR382298.3 666 0.854 - 0.854 - - - - - - -
11. MAL_1 MAL_1 200 0.851 - 0.851 - - - - - - -
12. zgc:113276 ENSDARG00000056650 218 0.85 - - - - - - 0.850 - - zgc:113276 [Source:ZFIN;Acc:ZDB-GENE-050522-7]
13. TMPPE ENSDARG00000036059, ENSDARG00000114955 567 0.847 - - - - - - 0.847 - - transmembrane protein with metallophosphoesterase domain [Source:ZFIN;Acc:ZDB-GENE-061013-104]
14. ctdspla ENSDARG00000071673 1447 0.847 - - 0.847 - - - - - - CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like a [Source:ZFIN;Acc:ZDB-GENE-060825-333]
15. spsb3a ENSDARG00000077737 527 0.847 - - 0.847 - - - - - - splA/ryanodine receptor domain and SOCS box containing 3a [Source:ZFIN;Acc:ZDB-GENE-030131-4182]
16. fam213b ENSDARG00000029795 387 0.846 - - 0.846 - - - - - - family with sequence similarity 213, member B [Source:ZFIN;Acc:ZDB-GENE-040426-2556]
17. stard10 ENSDARG00000097718 1041 0.846 - - 0.846 - - - - - - StAR-related lipid transfer (START) domain containing 10 [Source:ZFIN;Acc:ZDB-GENE-040426-1797]
18. irs2 irs2 392 0.842 - 0.842 - - - - - - -
19. nelfe ENSDARG00000004343 1647 0.841 - 0.841 - - - - - - - negative elongation factor complex member E [Source:ZFIN;Acc:ZDB-GENE-040718-69]
20. pomt2 ENSDARG00000055027 475 0.84 - - - - 0.840 - - - - protein-O-mannosyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-070112-1002]
21. ap2m1b ENSDARG00000033899 317 0.839 - 0.839 - - - - - - - adaptor related protein complex 2 subunit mu 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1103]
22. agps ENSDARG00000042821 203 0.838 - 0.838 - - - - - - - alkylglycerone phosphate synthase [Source:ZFIN;Acc:ZDB-GENE-031118-14]
23. trim8a ENSDARG00000090512 228 0.835 - - 0.835 - - - - - - tripartite motif containing 8a [Source:ZFIN;Acc:ZDB-GENE-130107-1]
24. tnfrsf19 ENSDARG00000041869 796 0.831 0.831 - - - - - - - - tumor necrosis factor receptor superfamily, member 19 [Source:ZFIN;Acc:ZDB-GENE-030131-6760]
25. nfic ENSDARG00000043210 266 0.831 - 0.831 - - - - - - - nuclear factor I/C [Source:ZFIN;Acc:ZDB-GENE-080305-2]
26. hsd11b3a hsd11b3a 1388 0.829 - - 0.829 - - - - - -
27. gramd1a ENSDARG00000076689 1148 0.825 - - 0.825 - - - - - - GRAM domain containing 1A [Source:ZFIN;Acc:ZDB-GENE-060503-688]
28. slc5a6 slc5a6 224 0.822 - - 0.822 - - - - - -
29. UIMC1 200 0.822 - 0.822 - - - - - - - ubiquitin interaction motif containing 1
30. mtss1l mtss1l 2494 0.822 - 0.822 - - - - - - -
31. chst3a ENSDARG00000061070 127 0.821 - - - - - - 0.821 - - carbohydrate (chondroitin 6) sulfotransferase 3a [Source:ZFIN;Acc:ZDB-GENE-090312-180]
32. capn2l ENSDARG00000034211, ENSDARG00000111153 3858 0.82 - - 0.820 - - - - - - calpain 2, (m/II) large subunit, like [Source:ZFIN;Acc:ZDB-GENE-050417-341]
33. trpt1 ENSDARG00000037628 1081 0.815 - 0.815 - - - - - - - tRNA phosphotransferase 1 [Source:ZFIN;Acc:ZDB-GENE-050227-16]
34. mepce ENSDARG00000059461 703 0.812 - 0.812 - - - - - - - methylphosphate capping enzyme [Source:ZFIN;Acc:ZDB-GENE-030131-3936]
35. prdm10 ENSDARG00000104251 510 0.811 - - 0.811 - - - - - - PR domain containing 10 [Source:ZFIN;Acc:ZDB-GENE-050419-74]
36. BX324179.3 BX324179.3 326 0.809 - 0.809 - - - - - - -
37. efhc1 ENSDARG00000009743 113 0.809 - - - 0.809 - - - - - EF-hand domain (C-terminal) containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1300]
38. nrip1a ENSDARG00000068965 684 0.808 - 0.808 - - - - - - - nuclear receptor interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-040723-8]
39. alkbh8 ENSDARG00000060256 102 0.806 - - - - - - 0.806 - - alkB homolog 8, tRNA methyltransferase [Source:ZFIN;Acc:ZDB-GENE-100922-251]
40. usp5 ENSDARG00000014517, ENSDARG00000114598 1969 0.805 0.805 - - - - - - - - ubiquitin specific peptidase 5 (isopeptidase T) [Source:ZFIN;Acc:ZDB-GENE-040426-2584]
41. CABZ01043311.1 CABZ01043311.1 475 0.804 - - - - - - 0.804 - -
42. churc1 ENSDARG00000010831, ENSDARG00000113360 1271 0.803 - - 0.803 - - - - - - churchill domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041001-150]
43. si:dkeyp-68b7.5_1 ENSDARG00000079930 159 0.803 - - - - - - 0.803 - - si:dkeyp-68b7.5 [Source:ZFIN;Acc:ZDB-GENE-070912-670]
44. hrasb ENSDARG00000005651 662 0.802 - 0.802 - - - - - - - -Ha-ras Harvey rat sarcoma viral oncogene homolog b [Source:ZFIN;Acc:ZDB-GENE-050522-466]
45. KCNIP4 ENSDARG00000088100 86 0.802 - - - - 0.802 - - - - potassium voltage-gated channel interacting protein 4 [Source:HGNC Symbol;Acc:HGNC:30083]
46. ogfr ENSDARG00000037837 1001 0.802 - - - - - - 0.802 - - opioid growth factor receptor [Source:ZFIN;Acc:ZDB-GENE-030131-377]
47. plch1 ENSDARG00000079253 1216 0.801 - - - - - - 0.801 - - phospholipase C, eta 1 [Source:ZFIN;Acc:ZDB-GENE-060503-398]
48. DNAJB14 ENSDARG00000069996 144 0.801 - - - - - - 0.801 - - DnaJ (Hsp40) homolog, subfamily B, member 14 [Source:ZFIN;Acc:ZDB-GENE-061110-138]
49. PPAP2A PPAP2A 2409 0.799 0.799 - - - - - - - -
50. si:dkey-165g20.5 si:dkey-165g20.5 125 0.798 - - - 0.798 - - - - -
51. atxn7l2b ENSDARG00000056268 226 0.797 - - - - - - 0.797 - - ataxin 7-like 2b [Source:ZFIN;Acc:ZDB-GENE-040718-403]
52. tprg1 ENSDARG00000056026, ENSDARG00000115269 382 0.797 0.797 - - - - - - - - tumor protein p63 regulated 1 [Source:ZFIN;Acc:ZDB-GENE-070410-113]
53. CABZ01068473.1 CABZ01068473.1 67 0.796 - - 0.796 - - - - - -
54. C12H10orf71 C12H10orf71 595 0.796 - - - - - - 0.796 - -
55. nptx1l ENSDARG00000074671 569 0.795 - - - - - - 0.795 - - neuronal pentraxin 1 like [Source:ZFIN;Acc:ZDB-GENE-040426-2418]
56. slc26a11 ENSDARG00000043021 157 0.794 - - - - - - 0.794 - - solute carrier family 26 (anion exchanger), member 11 [Source:ZFIN;Acc:ZDB-GENE-030131-5349]
57. esyt1a ENSDARG00000034714 129 0.794 - - - - - - 0.794 - - extended synaptotagmin-like protein 1a [Source:ZFIN;Acc:ZDB-GENE-090311-55]
58. SMUG1 ENSDARG00000101308 236 0.794 - - - - - - 0.794 - - single-strand-selective monofunctional uracil-DNA glycosylase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9473]
59. sema6a ENSDARG00000102165 1401 0.793 - 0.793 - - - - - - - sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A [Source:ZFIN;Acc:ZDB-GENE-030131-8004]
60. CABZ01073168.1 CABZ01073168.1 280 0.792 - 0.792 - - - - - - -
61. mfng ENSDARG00000042925 104 0.791 - - - 0.791 - - - - - MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:ZFIN;Acc:ZDB-GENE-041130-1]
62. epha7 ENSDARG00000004635, ENSDARG00000112305 1373 0.79 - 0.790 - - - - - - - eph receptor A7 [Source:ZFIN;Acc:ZDB-GENE-030131-3745]
63. POLE4 ENSDARG00000013016 848 0.789 - - - - - - 0.789 - - polymerase (DNA-directed), epsilon 4, accessory subunit [Source:ZFIN;Acc:ZDB-GENE-050522-309]
64. dock5 ENSDARG00000001968 467 0.789 - 0.789 - - - - - - - dedicator of cytokinesis 5 [Source:ZFIN;Acc:ZDB-GENE-080108-4]
65. si:dkey-24i24.3 ENSDARG00000088452 27 0.788 - - 0.788 - - - - - - si:dkey-24i24.3 [Source:ZFIN;Acc:ZDB-GENE-110411-103]
66. pcgf5b ENSDARG00000052388 163 0.788 - - 0.788 - - - - - - polycomb group ring finger 5b [Source:ZFIN;Acc:ZDB-GENE-060512-34]
67. tctn2 ENSDARG00000035633 84 0.787 - - - - - - 0.787 - - tectonic family member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-751]
68. znf410 ENSDARG00000008218 1807 0.787 - 0.787 - - - - - - - zinc finger protein 410 [Source:ZFIN;Acc:ZDB-GENE-040426-1817]
69. atad5a ENSDARG00000070568 1840 0.786 - 0.786 - - - - - - - ATPase family, AAA domain containing 5a [Source:ZFIN;Acc:ZDB-GENE-070912-20]
70. map1lc3c ENSDARG00000100528 31 0.786 - - 0.786 - - - - - - microtubule-associated protein 1 light chain 3 gamma [Source:ZFIN;Acc:ZDB-GENE-040426-1080]
71. ECT2L 39 0.784 - - - - 0.784 - - - - epithelial cell transforming 2 like, transcript variant X4
72. si:dkey-164n2.1 47 0.783 - - 0.783 - - - - - - si:dkey-164n2.1, transcript variant X1
73. CABZ01022254.1 CABZ01022254.1 9 0.783 - - 0.783 - - - - - -
74. si:ch73-27e22.3 ENSDARG00000077263 10 0.783 - - 0.783 - - - - - - si:ch73-27e22.3 [Source:ZFIN;Acc:ZDB-GENE-070705-231]
75. ngfrb ENSDARG00000089223, ENSDARG00000115390 41 0.782 - - 0.782 - - - - - - nerve growth factor receptor b [Source:ZFIN;Acc:ZDB-GENE-070606-2]
76. SVEP1 ENSDARG00000013526 16 0.782 - - 0.782 - - - - - - sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-110726-1]
77. gcnt3 ENSDARG00000060471 37 0.782 - - 0.782 - - - - - - glucosaminyl (N-acetyl) transferase 3, mucin type [Source:ZFIN;Acc:ZDB-GENE-110411-253]
78. atg9b ENSDARG00000055292 155 0.781 - 0.781 - - - - - - - autophagy related 9B [Source:ZFIN;Acc:ZDB-GENE-091111-3]
79. VDR VDR 489 0.781 - - - 0.781 - - - - -
80. tmem8a ENSDARG00000032795 677 0.781 - - 0.781 - - - - - - transmembrane protein 8A [Source:ZFIN;Acc:ZDB-GENE-090312-158]
81. asic1b ENSDARG00000101866 61 0.78 - - 0.780 - - - - - - acid-sensing (proton-gated) ion channel 1b [Source:ZFIN;Acc:ZDB-GENE-040513-1]
82. cdc42ep2 ENSDARG00000053959 32 0.778 - - 0.778 - - - - - - CDC42 effector protein (Rho GTPase binding) 2 [Source:ZFIN;Acc:ZDB-GENE-050320-104]
83. mllt3 ENSDARG00000006754 985 0.778 - 0.778 - - - - - - - MLLT3, super elongation complex subunit [Source:ZFIN;Acc:ZDB-GENE-050417-356]
84. bmp6 ENSDARG00000015686 211 0.778 - - 0.778 - - - - - - bone morphogenetic protein 6 [Source:ZFIN;Acc:ZDB-GENE-050306-42]
85. cdc7 ENSDARG00000023584 536 0.778 - 0.778 - - - - - - - cell division cycle 7 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-041114-113]
86. fam114a1 ENSDARG00000008287, ENSDARG00000116401 949 0.777 - - 0.777 - - - - - - family with sequence similarity 114, member A1 [Source:ZFIN;Acc:ZDB-GENE-070410-52]
87. slain1a ENSDARG00000019185, ENSDARG00000109350, ENSDARG00000112333, ENSDARG00000116098 135 0.777 - - - 0.777 - - - - - SLAIN motif family, member 1a [Source:ZFIN;Acc:ZDB-GENE-030131-7751]
88. ZNF337_20 ZNF337_20 65 0.777 - - 0.777 - - - - - -
89. trim9 ENSDARG00000039123 53 0.777 - - - - - - 0.777 - - tripartite motif containing 9 [Source:ZFIN;Acc:ZDB-GENE-030131-8043]
90. nitr3c ENSDARG00000057620, ENSDARG00000077998, ENSDARG00000111724 96 0.776 - - - 0.776 - - - - - novel immune-type receptor 3c [Source:ZFIN;Acc:ZDB-GENE-041001-13]
91. PKN2 ENSDARG00000101293 358 0.776 - 0.776 - - - - - - - protein kinase N2 [Source:HGNC Symbol;Acc:HGNC:9406]
92. pgap2 ENSDARG00000044596 60 0.776 - - 0.776 - - - - - - post-GPI attachment to proteins 2 [Source:ZFIN;Acc:ZDB-GENE-050320-119]
93. zgc:162180 zgc:162180 31 0.775 - - 0.775 - - - - - -
94. ACBD3 ENSDARG00000042623 159 0.775 - - - 0.775 - - - - - acyl-Coenzyme A binding domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1930]
95. smurf1 ENSDARG00000016086 878 0.775 - - 0.775 - - - - - - SMAD specific E3 ubiquitin protein ligase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2744]
96. TRIM35 TRIM35 100 0.774 - - - - - - 0.774 - -
97. mafg2 mafg2 1041 0.774 - - - - - - 0.774 - -
98. hsd17b3 ENSDARG00000023287, ENSDARG00000115935, ENSDARG00000116671 134 0.774 - - - 0.774 - - - - - hydroxysteroid (17-beta) dehydrogenase 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1339]
99. chico ENSDARG00000019588 77 0.774 - - 0.774 - - - - - - chico [Source:ZFIN;Acc:ZDB-GENE-000210-28]
100. CABZ01027547.1 CABZ01027547.1 128 0.774 - - 0.774 - - - - - -

There are 407 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA