Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for f3a

Gene Name Gene ID Reads Annotation
f3a ENSDARG00000099124, ENSDARG00000110910, ENSDARG00000116919 115 coagulation factor IIIa [Source:ZFIN;Acc:ZDB-GENE-071119-5]










Genes with expression patterns similar to f3a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. f3a ENSDARG00000099124, ENSDARG00000110910, ENSDARG00000116919 115 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 coagulation factor IIIa [Source:ZFIN;Acc:ZDB-GENE-071119-5]
2. josd2 ENSDARG00000057626, ENSDARG00000111978 273 2.508 - 0.774 - 0.940 - - 0.794 - - Josephin domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040426-850]
3. PLEKHG3 72 1.854 0.895 - - 0.959 - - - - - pleckstrin homology and RhoGEF domain containing G3, transcript variant X5
4. ftr56 ENSDARG00000030954 23 1.779 0.911 - - - - - 0.868 - - finTRIM family, member 56 [Source:ZFIN;Acc:ZDB-GENE-030131-2801]
5. fbxw2 ENSDARG00000009745 618 1.717 - - - - - 0.848 0.869 - - F-box and WD repeat domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-050522-303]
6. stk25a ENSDARG00000002210 372 1.705 - 0.827 - - - - 0.878 - - serine/threonine kinase 25a [Source:ZFIN;Acc:ZDB-GENE-041010-92]
7. si:dkey-23c22.1 si:dkey-23c22.1 133 1.704 - - - - - 0.897 0.807 - -
8. si:dkey-150k17.2 si:dkey-150k17.2 40 1.702 - 0.754 - - 0.948 - - - -
9. STYK1 108 1.699 - - - - - 0.899 0.800 - - serine/threonine/tyrosine kinase 1
10. senp5 ENSDARG00000060646 303 1.696 - 0.907 - - - - 0.789 - - SUMO specific peptidase 5 [Source:ZFIN;Acc:ZDB-GENE-050208-772]
11. ECM1 ECM1 87 1.695 - - - 0.903 - 0.792 - - -
12. plch2a ENSDARG00000059960 222 1.694 0.756 - - 0.938 - - - - - phospholipase C, eta 2a [Source:ZFIN;Acc:ZDB-GENE-030131-6367]
13. WDR70 ENSDARG00000109022 265 1.692 - - - 0.934 - 0.758 - - - WD repeat domain 70 [Source:HGNC Symbol;Acc:HGNC:25495]
14. SPA17 ENSDARG00000069361 141 1.686 - 0.898 - - - - 0.788 - - sperm autoantigenic protein 17 [Source:ZFIN;Acc:ZDB-GENE-061027-337]
15. ccrl1a ccrl1a 40 1.681 - 0.777 - - 0.904 - - - -
16. ZNF337_4 ZNF337_4 409 1.679 0.863 - - - - - 0.816 - -
17. cryz ENSDARG00000016074 322 1.672 0.844 - - - - - 0.828 - - crystallin, zeta (quinone reductase) [Source:ZFIN;Acc:ZDB-GENE-050306-24]
18. zdhhc7 ENSDARG00000019484 160 1.671 0.922 - - - - - 0.749 - - zinc finger, DHHC-type containing 7 [Source:ZFIN;Acc:ZDB-GENE-040718-346]
19. nubp2 ENSDARG00000055653 803 1.663 0.830 - - 0.833 - - - - - nucleotide binding protein 2 (MinD homolog, E. coli) [Source:ZFIN;Acc:ZDB-GENE-051023-10]
20. APH1A APH1A 129 1.661 - - 0.733 0.928 - - - - -
21. CRP CRP 136 1.646 - - - - - 0.938 0.708 - -
22. TRAFD1 ENSDARG00000075123, ENSDARG00000109953 358 1.644 - - - - - 0.791 0.853 - - TRAF-type zinc finger domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-070410-43]
23. si:dkey-97a13.9 si:dkey-97a13.9 169 1.638 - - - - 0.762 0.876 - - -
24. RPS6KA5 ENSDARG00000060551 109 1.636 - 0.745 - - - - 0.891 - - ribosomal protein S6 kinase, polypeptide 5 [Source:ZFIN;Acc:ZDB-GENE-130530-693]
25. si:ch211-207c6.6 si:ch211-207c6.6 32 1.632 0.883 0.749 - - - - - - -
26. nxph2a ENSDARG00000063224 75 1.63 0.891 0.739 - - - - - - - neurexophilin 2a [Source:ZFIN;Acc:ZDB-GENE-060503-124]
27. dhrs11a ENSDARG00000046090, ENSDARG00000112531 411 1.63 - - - 0.826 - 0.804 - - - dehydrogenase/reductase (SDR family) member 11a [Source:ZFIN;Acc:ZDB-GENE-060929-324]
28. ttll11 ENSDARG00000060374, ENSDARG00000113807 225 1.621 0.790 - - - - - 0.831 - - tubulin tyrosine ligase-like family, member 11 [Source:ZFIN;Acc:ZDB-GENE-061013-747]
29. FETUB_1 FETUB_1 345 1.61 - 0.806 - - - 0.804 - - -
30. tmem123 ENSDARG00000095674 66 1.609 0.898 - - - - 0.711 - - - transmembrane protein 123 [Source:ZFIN;Acc:ZDB-GENE-050419-69]
31. CABZ01071757.1 CABZ01071757.1 108 1.606 - 0.769 - - - 0.837 - - -
32. SDSL ENSDARG00000074698 34 1.605 0.869 - 0.736 - - - - - - serine dehydratase-like [Source:ZFIN;Acc:ZDB-GENE-131121-410]
33. AIFM3 ENSDARG00000062780 358 1.6 0.774 - - - - 0.826 - - - apoptosis-inducing factor, mitochondrion-associated, 3 [Source:ZFIN;Acc:ZDB-GENE-140619-2]
34. stx11a ENSDARG00000044039 39 1.59 - 0.771 - - - - 0.819 - - syntaxin 11a [Source:ZFIN;Acc:ZDB-GENE-040426-2564]
35. RAP1GAP ENSDARG00000056554, ENSDARG00000110356 288 1.57 0.825 - - - - 0.745 - - - RAP1 GTPase activating protein [Source:ZFIN;Acc:ZDB-GENE-080402-9]
36. SMIM13_1 SMIM13_1 592 1.555 0.829 0.726 - - - - - - -
37. fdx1b ENSDARG00000038956, ENSDARG00000113144 66 1.554 - 0.729 - - - - 0.825 - - ferredoxin 1b [Source:ZFIN;Acc:ZDB-GENE-060526-382]
38. vps26bl ENSDARG00000055433 645 1.548 - - - 0.808 - 0.740 - - - vacuolar protein sorting 26 homolog B, like [Source:ZFIN;Acc:ZDB-GENE-040718-112]
39. gpr37b ENSDARG00000033296 283 1.546 - 0.761 - - - - 0.785 - - G protein-coupled receptor 37b [Source:ZFIN;Acc:ZDB-GENE-041210-264]
40. acot9.1 ENSDARG00000058352, ENSDARG00000114328 489 1.533 - - - 0.795 - - 0.738 - - acyl-CoA thioesterase 9, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-040724-139]
41. ASPH ENSDARG00000055945 214 1.518 - - - 0.773 - - 0.745 - - aspartate beta-hydroxylase [Source:ZFIN;Acc:ZDB-GENE-031112-5]
42. DENND1A ENSDARG00000014592 436 1.511 - 0.738 - 0.773 - - - - - DENN/MADD domain containing 1A [Source:ZFIN;Acc:ZDB-GENE-060404-6]
43. pkig ENSDARG00000086471 665 1.506 - - - 0.802 - - 0.704 - - protein kinase (cAMP-dependent, catalytic) inhibitor gamma [Source:ZFIN;Acc:ZDB-GENE-050302-97]
44. serpinb1 ENSDARG00000055416 1320 1.494 0.703 - - - - 0.791 - - - serpin peptidase inhibitor, clade B (ovalbumin), member 1 [Source:ZFIN;Acc:ZDB-GENE-040718-400]
45. sult1st1 ENSDARG00000028275 806 1.494 - - - - - 0.716 0.778 - - sulfotransferase family 1, cytosolic sulfotransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2144]
46. rapgef1a ENSDARG00000043593 416 1.481 0.729 0.752 - - - - - - - Rap guanine nucleotide exchange factor (GEF) 1a [Source:ZFIN;Acc:ZDB-GENE-081105-26]
47. si:dkey-243i1.1 ENSDARG00000034227 257 1.479 - - - - - 0.701 0.778 - - si:dkey-243i1.1 [Source:ZFIN;Acc:ZDB-GENE-030131-6399]
48. clptm1l ENSDARG00000021048 1234 1.478 0.702 - - - - 0.776 - - - CLPTM1-like [Source:ZFIN;Acc:ZDB-GENE-040718-75]
49. im:7148400 im:7148400 787 1.473 - - - - - 0.735 0.738 - -
50. map4k3a ENSDARG00000087742 771 1.472 0.738 0.734 - - - - - - - mitogen-activated protein kinase kinase kinase kinase 3a [Source:ZFIN;Acc:ZDB-GENE-130329-1]
51. si:dkey-75a21.2 ENSDARG00000093188 258 1.469 - 0.753 - - - - 0.716 - - si:dkey-75a21.2 [Source:ZFIN;Acc:ZDB-GENE-030131-6823]
52. impad1 ENSDARG00000058114 667 1.469 - - - 0.734 - 0.735 - - - inositol monophosphatase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-051127-23]
53. SACM1L_1 SACM1L_1 750 1.457 0.723 - - - - - 0.734 - -
54. si:dkey-172j4.3 ENSDARG00000074183 563 1.451 0.711 - - 0.740 - - - - - si:dkey-172j4.3 [Source:ZFIN;Acc:ZDB-GENE-081104-24]
55. plin2 ENSDARG00000042332, ENSDARG00000116454 399 1.449 - - - - - 0.716 0.733 - - perilipin 2 [Source:ZFIN;Acc:ZDB-GENE-050913-12]
56. myo9al1 myo9al1 1194 1.448 - - - - - 0.705 0.743 - -
57. zgc:110353 ENSDARG00000039443 80 0.976 - - - 0.976 - - - - - zgc:110353 [Source:ZFIN;Acc:ZDB-GENE-050417-310]
58. arhgap22 ENSDARG00000021255 117 0.968 - - - 0.968 - - - - - Rho GTPase activating protein 22 [Source:ZFIN;Acc:ZDB-GENE-090313-87]
59. cx41.8 cx41.8 7 0.967 - - - - 0.967 - - - -
60. nlgn3b ENSDARG00000062376 171 0.966 - - - 0.966 - - - - - neuroligin 3b [Source:ZFIN;Acc:ZDB-GENE-060526-197]
61. GMIP ENSDARG00000077249 43 0.966 - - - 0.966 - - - - - GEM interacting protein [Source:ZFIN;Acc:ZDB-GENE-130530-823]
62. zgc:154054 ENSDARG00000099923 19 0.965 - - - 0.965 - - - - - zgc:154054 [Source:ZFIN;Acc:ZDB-GENE-061103-283]
63. gtf3ab ENSDARG00000071583, ENSDARG00000116242 58 0.965 - - - 0.965 - - - - - general transcription factor IIIA, b [Source:ZFIN;Acc:ZDB-GENE-030131-7698]
64. zgc:174224_2 ENSDARG00000093875 22 0.964 - - - - 0.964 - - - - zgc:174224 [Source:ZFIN;Acc:ZDB-GENE-071004-118]
65. zgc:173652 22 0.964 - - - 0.964 - - - - - zgc:173652
66. klhl36 ENSDARG00000030251, ENSDARG00000113095 32 0.964 - - - 0.964 - - - - - kelch-like family member 36 [Source:ZFIN;Acc:ZDB-GENE-050522-324]
67. cyp2x6 ENSDARG00000079653, ENSDARG00000111425 33 0.963 - - - 0.963 - - - - - cytochrome P450, family 2, subfamily X, polypeptide 6 [Source:ZFIN;Acc:ZDB-GENE-050320-144]
68. sycp1 ENSDARG00000003904 8 0.962 - - - - 0.962 - - - - synaptonemal complex protein 1 [Source:ZFIN;Acc:ZDB-GENE-040910-6]
69. dnaaf2 ENSDARG00000103132 24 0.962 - - - - 0.962 - - - - dynein, axonemal, assembly factor 2 [Source:ZFIN;Acc:ZDB-GENE-050809-128]
70. si:dkey-33g13.1 si:dkey-33g13.1 3 0.962 - - - - 0.962 - - - -
71. slc25a29 ENSDARG00000057352 9 0.962 - - - - 0.962 - - - - solute carrier family 25 (mitochondrial carnitine/acylcarnitine carrier), member 29 [Source:ZFIN;Acc:ZDB-GENE-050913-70]
72. CU571315.2 ENSDARG00000101956 15 0.962 - - - - 0.962 - - - -
73. cyp2aa11 ENSDARG00000103456 42 0.962 - - - - 0.962 - - - - cytochrome P450, family 2, subfamily AA, polypeptide 11 [Source:ZFIN;Acc:ZDB-GENE-110114-3]
74. si:ch211-10h8.1 si:ch211-10h8.1 10 0.962 - - - - 0.962 - - - -
75. si:dkey-175g6.2 ENSDARG00000086665 39 0.962 - - - - 0.962 - - - - si:dkey-175g6.2 [Source:ZFIN;Acc:ZDB-GENE-030131-8061]
76. COL26A1 COL26A1 9 0.962 - - - - 0.962 - - - -
77. CMA1_4 CMA1_4 23 0.962 - - - - 0.962 - - - -
78. zgc:172075 ENSDARG00000076146 93 0.962 - - - 0.962 - - - - - zgc:172075 [Source:ZFIN;Acc:ZDB-GENE-080215-3]
79. si:dkeyp-53d3.6 204 0.961 - - - 0.961 - - - - - si:dkeyp-53d3.6, transcript variant X1
80. OTOL1 OTOL1 19 0.959 - - - - 0.959 - - - -
81. si:ch211-59g22.2 si:ch211-59g22.2 7 0.959 - - - - 0.959 - - - -
82. zgc:153733 ENSDARG00000110325, ENSDARG00000111744, ENSDARG00000114452 176 0.958 - - - 0.958 - - - - - zgc:153733 [Source:ZFIN;Acc:ZDB-GENE-060825-273]
83. 5S_rRNA_18 5S_rRNA_18 270 0.957 - - - 0.957 - - - - -
84. haao ENSDARG00000076487 143 0.956 - - - 0.956 - - - - - 3-hydroxyanthranilate 3,4-dioxygenase [Source:ZFIN;Acc:ZDB-GENE-041114-89]
85. HAP1 HAP1 481 0.956 - - - 0.956 - - - - -
86. nitr3a ENSDARG00000110676 13 0.956 - - - - 0.956 - - - - novel immune-type receptor 3a [Source:NCBI gene;Acc:60649]
87. FAM196A 82 0.955 0.955 - - - - - - - - family with sequence similarity 196 member A
88. PHLDB2_1 PHLDB2_1 316 0.955 - - - 0.955 - - - - -
89. enosf1 ENSDARG00000038359 209 0.953 - - - - - - 0.953 - - enolase superfamily member 1 [Source:ZFIN;Acc:ZDB-GENE-060929-780]
90. si:ch211-150j10.4 ENSDARG00000079336 23 0.952 - - - - 0.952 - - - - si:ch211-150j10.4 [Source:ZFIN;Acc:ZDB-GENE-110411-215]
91. arl10 37 0.952 0.952 - - - - - - - - ADP-ribosylation factor-like 10
92. FEZ2_1 FEZ2_1 153 0.95 - - - 0.950 - - - - -
93. GPR4 ENSDARG00000079479 92 0.949 - - - 0.949 - - - - - G protein-coupled receptor 4 [Source:ZFIN;Acc:ZDB-GENE-101202-1]
94. amn1 ENSDARG00000070478, ENSDARG00000111705 72 0.948 - - - 0.948 - - - - - antagonist of mitotic exit network 1 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-060825-13]
95. si:dkeyp-82a1.6 ENSDARG00000094336 228 0.948 - - - 0.948 - - - - - si:dkeyp-82a1.6 [Source:ZFIN;Acc:ZDB-GENE-081105-150]
96. otof otof 127 0.947 - - - 0.947 - - - - -
97. oca2 ENSDARG00000061303 22 0.947 0.947 - - - - - - - - oculocutaneous albinism II [Source:ZFIN;Acc:ZDB-GENE-070718-4]
98. IQCG ENSDARG00000068678 77 0.946 - 0.946 - - - - - - - IQ motif containing G [Source:ZFIN;Acc:ZDB-GENE-050419-109]
99. TRIM35_4 TRIM35_4 63 0.946 0.946 - - - - - - - -
100. treh ENSDARG00000077911 9 0.946 0.946 - - - - - - - - trehalase (brush-border membrane glycoprotein) [Source:ZFIN;Acc:ZDB-GENE-070912-84]

There are 1250 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA