Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for exosc3

Gene Name Gene ID Reads Annotation
exosc3 ENSDARG00000098334, ENSDARG00000104246 1287 exosome component 3 [Source:ZFIN;Acc:ZDB-GENE-050706-140]










Genes with expression patterns similar to exosc3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. exosc3 ENSDARG00000098334, ENSDARG00000104246 1287 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 exosome component 3 [Source:ZFIN;Acc:ZDB-GENE-050706-140]
2. elf2b ENSDARG00000079626, ENSDARG00000117064 3057 1.783 - - - - 0.986 - 0.797 - - E74-like factor 2b (ets domain transcription factor) [Source:ZFIN;Acc:ZDB-GENE-031215-1]
3. gab1 ENSDARG00000037018 1489 1.762 - - - - 0.965 - - 0.797 - GRB2-associated binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2674]
4. clasp1a ENSDARG00000010280 1158 1.744 - - - - 0.963 - 0.781 - - cytoplasmic linker associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-081104-520]
5. arhgap11a ENSDARG00000100019 1642 1.719 - - - - 0.966 - 0.753 - - Rho GTPase activating protein 11A [Source:ZFIN;Acc:ZDB-GENE-040426-2562]
6. pdap1a ENSDARG00000092546, ENSDARG00000116115 7617 1.701 - - - - 0.989 - 0.712 - - pdgfa associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1693]
7. arcn1b ENSDARG00000031214 4529 1.699 - - - 0.741 0.958 - - - - archain 1b [Source:ZFIN;Acc:ZDB-GENE-040121-7]
8. tnrc6b ENSDARG00000074161 4597 1.697 - - - - 0.959 - 0.738 - - trinucleotide repeat containing 6b [Source:ZFIN;Acc:ZDB-GENE-030131-13]
9. lamtor5 ENSDARG00000090194, ENSDARG00000115255 2539 1.692 - - - - 0.955 - 0.737 - - late endosomal/lysosomal adaptor, MAPK and MTOR activator 5 [Source:ZFIN;Acc:ZDB-GENE-110411-193]
10. ube2c ENSDARG00000101618, ENSDARG00000114670 5271 1.69 - - - - 0.947 - 0.743 - - ubiquitin-conjugating enzyme E2C [Source:ZFIN;Acc:ZDB-GENE-051030-48]
11. ptgr1 ENSDARG00000024877, ENSDARG00000115676 4312 1.669 - - - 0.708 0.961 - - - - prostaglandin reductase 1 [Source:ZFIN;Acc:ZDB-GENE-041212-80]
12. pitx2 ENSDARG00000036194 2279 1.666 - - - - 0.958 - - 0.708 - paired-like homeodomain 2 [Source:ZFIN;Acc:ZDB-GENE-990714-27]
13. IM:7163548 IM:7163548 6540 1.624 - - - - 0.899 - 0.725 - -
14. ITCH ITCH 1226 1.591 0.799 0.792 - - - - - - -
15. pomgnt1 ENSDARG00000052025, ENSDARG00000111516 983 1.554 - 0.709 - - - - 0.845 - - protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-) [Source:ZFIN;Acc:ZDB-GENE-070112-991]
16. ZDHHC20_1 ZDHHC20_1 440 1.535 - - - - - 0.742 - 0.793 -
17. nom1 ENSDARG00000060027, ENSDARG00000112720 831 1.532 - 0.754 - - - - - 0.778 - nucleolar protein with MIF4G domain 1 [Source:ZFIN;Acc:ZDB-GENE-060503-321]
18. arl15b ENSDARG00000057995, ENSDARG00000109775 1243 1.524 - 0.740 - - - - - 0.784 - ADP-ribosylation factor-like 15b [Source:ZFIN;Acc:ZDB-GENE-080813-2]
19. dpcd ENSDARG00000060501 479 1.514 - - - - - 0.736 - 0.778 - deleted in primary ciliary dyskinesia homolog (mouse) [Source:ZFIN;Acc:ZDB-GENE-060825-166]
20. si:ch211-130m23.2 ENSDARG00000095136 121 1.511 - - - - - - 0.751 0.760 - si:ch211-130m23.2 [Source:ZFIN;Acc:ZDB-GENE-060531-13]
21. swi5 ENSDARG00000078492 1299 1.51 - - - - - 0.784 0.726 - - SWI5 homologous recombination repair protein [Source:ZFIN;Acc:ZDB-GENE-091204-368]
22. prkcbp1l ENSDARG00000011932 2714 1.51 - - - - - - 0.708 0.802 - protein kinase C binding protein 1, like [Source:ZFIN;Acc:ZDB-GENE-030131-2199]
23. cwf19l2 ENSDARG00000091760 1372 1.508 - - - - - - 0.799 0.709 - CWF19-like 2, cell cycle control (S. pombe) [Source:ZFIN;Acc:ZDB-GENE-050913-1]
24. hells ENSDARG00000057738, ENSDARG00000112932, ENSDARG00000116012 1443 1.508 - - - - - 0.761 0.747 - - helicase, lymphoid specific [Source:ZFIN;Acc:ZDB-GENE-030131-9923]
25. clasrp ENSDARG00000061742, ENSDARG00000116329 1650 1.504 - - - - - - 0.795 0.709 - CLK4-associating serine/arginine rich protein [Source:ZFIN;Acc:ZDB-GENE-060503-837]
26. dnajc3 dnajc3 802 1.5 - - - - - - 0.752 0.748 -
27. acot13 ENSDARG00000061728, ENSDARG00000114746 516 1.492 - - - - - - 0.746 0.746 - acyl-CoA thioesterase 13 [Source:ZFIN;Acc:ZDB-GENE-060503-437]
28. U3_2 U3_2 669 1.487 - 0.741 - - - - - 0.746 -
29. CU929408.1 CU929408.1 714 1.484 - 0.762 - - - - 0.722 - -
30. tctex1d1 ENSDARG00000103545 409 1.481 - - - - - - 0.746 0.735 - Tctex1 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040912-49]
31. brd3a ENSDARG00000006527 1636 1.48 - 0.751 - - - - 0.729 - - bromodomain containing 3a [Source:ZFIN;Acc:ZDB-GENE-030131-6141]
32. suz12a ENSDARG00000070256 2229 1.473 - 0.725 - - - - 0.748 - - SUZ12, polycomb repressive complex 2 subunit a [Source:ZFIN;Acc:ZDB-GENE-040801-36]
33. itpr1a ENSDARG00000014655, ENSDARG00000117119 151 1.471 - - - - - 0.709 - 0.762 - inositol 1,4,5-trisphosphate receptor, type 1a [Source:ZFIN;Acc:ZDB-GENE-070604-3]
34. hsp90b1 ENSDARG00000003570, ENSDARG00000114206 5097 1.449 - - - - - - 0.722 0.727 - heat shock protein 90, beta (grp94), member 1 [Source:ZFIN;Acc:ZDB-GENE-031002-1]
35. r3hdm1 ENSDARG00000101458 5241 1.446 0.723 - - - - - 0.723 - - R3H domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7119]
36. enah ENSDARG00000032049 1526 1.446 - 0.714 - 0.732 - - - - - enabled homolog (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-010323-11]
37. hnrnpr ENSDARG00000014569 3423 1.445 - - - 0.700 - - - 0.745 - heterogeneous nuclear ribonucleoprotein R [Source:ZFIN;Acc:ZDB-GENE-040426-2766]
38. cyth1b ENSDARG00000021488 669 1.436 - 0.718 - - - 0.718 - - - cytohesin 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4311]
39. gpd2 ENSDARG00000062430 185 1.417 - 0.710 - - - - - 0.707 - glycerol-3-phosphate dehydrogenase 2 (mitochondrial) [Source:ZFIN;Acc:ZDB-GENE-030131-4869]
40. asap1a ENSDARG00000029463 1566 1.414 - 0.713 - - - - 0.701 - - ArfGAP with SH3 domain, ankyrin repeat and PH domain 1a [Source:ZFIN;Acc:ZDB-GENE-070912-129]
41. si:ch73-131e21.5 si:ch73-131e21.5 1895 0.991 - - - - 0.991 - - - -
42. CABZ01088509.1 CABZ01088509.1 1213 0.991 - - - - 0.991 - - - -
43. znf207a ENSDARG00000015538 2630 0.99 - - - - 0.990 - - - - zinc finger protein 207, a [Source:ZFIN;Acc:ZDB-GENE-040426-2273]
44. tmem198a ENSDARG00000042115 1694 0.99 - - - - 0.990 - - - - transmembrane protein 198a [Source:ZFIN;Acc:ZDB-GENE-070912-716]
45. CT955967.1 ENSDARG00000099956 2885 0.989 - - - - 0.989 - - - -
46. hspa12b ENSDARG00000030307 1664 0.989 - - - - 0.989 - - - - heat shock protein 12B [Source:ZFIN;Acc:ZDB-GENE-070226-1]
47. actr1 ENSDARG00000011611 3879 0.986 - - - - 0.986 - - - - ARP1 actin related protein 1, centractin [Source:ZFIN;Acc:ZDB-GENE-040426-2695]
48. tmpoa ENSDARG00000007315 3638 0.985 - - - - 0.985 - - - - thymopoietin a [Source:ZFIN;Acc:ZDB-GENE-030131-6003]
49. jarid2b ENSDARG00000062268 2206 0.982 - - - - 0.982 - - - - jumonji, AT rich interactive domain 2b [Source:ZFIN;Acc:ZDB-GENE-060503-246]
50. kdm6bb ENSDARG00000056929 4807 0.981 - - - - 0.981 - - - - lysine (K)-specific demethylase 6B, b [Source:ZFIN;Acc:ZDB-GENE-040724-166]
51. CABZ01070258.1 ENSDARG00000105687 3643 0.98 - - - - 0.980 - - - -
52. CDCA4 ENSDARG00000042319 7918 0.979 - - - - 0.979 - - - - cell division cycle associated 4 [Source:ZFIN;Acc:ZDB-GENE-030131-1695]
53. NDUFB2 ENSDARG00000045490 9141 0.978 - - - - 0.978 - - - - NADH:ubiquinone oxidoreductase subunit B2 [Source:ZFIN;Acc:ZDB-GENE-040426-1762]
54. cdc42 ENSDARG00000044573 11795 0.977 - - - - 0.977 - - - - cell division cycle 42 [Source:ZFIN;Acc:ZDB-GENE-030131-8783]
55. CABZ01013938.1 CABZ01013938.1 4497 0.976 - - - - 0.976 - - - -
56. epha4b ENSDARG00000011600 3110 0.972 - - - - 0.972 - - - - eph receptor A4b [Source:ZFIN;Acc:ZDB-GENE-030826-6]
57. ccdc53 982 0.968 - - - - 0.968 - - - - coiled-coil domain containing 53
58. ticrr ENSDARG00000045605 739 0.967 - - - - 0.967 - - - - TopBP1-interacting, checkpoint, and replication regulator [Source:ZFIN;Acc:ZDB-GENE-040728-1]
59. wu:fc26g07 wu:fc26g07 1165 0.967 - - - - 0.967 - - - -
60. il12rb2l ENSDARG00000074850 407 0.967 - - - - 0.967 - - - - interleukin 12 receptor, beta 2a, like [Source:ZFIN;Acc:ZDB-GENE-080107-6]
61. si:dkey-251i10.2 ENSDARG00000093957 4424 0.967 - - - - 0.967 - - - - si:dkey-251i10.2 [Source:ZFIN;Acc:ZDB-GENE-050506-102]
62. nkx2.3 ENSDARG00000039095, ENSDARG00000113490 493 0.967 - - - - 0.967 - - - - NK2 homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-990415-178]
63. SNORA70 SNORA70 511 0.967 - - - - 0.967 - - - -
64. CABZ01027552.1 CABZ01027552.1 760 0.967 - - - - 0.967 - - - -
65. USP2_1 USP2_1 544 0.967 - - - - 0.967 - - - -
66. MAP4K4 ENSDARG00000098670 4665 0.967 - - - - 0.967 - - - - mitogen-activated protein kinase kinase kinase kinase 4 [Source:ZFIN;Acc:ZDB-GENE-030131-6722]
67. stx6 ENSDARG00000042742, ENSDARG00000115635 1208 0.967 - - - - 0.967 - - - - syntaxin 6 [Source:ZFIN;Acc:ZDB-GENE-030131-858]
68. armc9 ENSDARG00000087299 459 0.967 - - - - 0.967 - - - - armadillo repeat containing 9 [Source:ZFIN;Acc:ZDB-GENE-100922-67]
69. zgc:110699 ENSDARG00000017474 381 0.966 - - - - 0.966 - - - - zgc:110699 [Source:ZFIN;Acc:ZDB-GENE-050522-487]
70. adcyap1b ENSDARG00000027740 1539 0.966 - - - - 0.966 - - - - adenylate cyclase activating polypeptide 1b [Source:ZFIN;Acc:ZDB-GENE-041010-89]
71. cdkn1a ENSDARG00000076554 591 0.966 - - - - 0.966 - - - - cyclin-dependent kinase inhibitor 1A [Source:ZFIN;Acc:ZDB-GENE-070705-7]
72. si:dkey-42i9.4 ENSDARG00000008049 4752 0.966 - - - - 0.966 - - - - si:dkey-42i9.4 [Source:ZFIN;Acc:ZDB-GENE-030131-8398]
73. esf1 ENSDARG00000008740 1206 0.966 - - - - 0.966 - - - - ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-4917]
74. znf280d ENSDARG00000077013 1387 0.966 - - - - 0.966 - - - - zinc finger protein 280D [Source:ZFIN;Acc:ZDB-GENE-030131-2260]
75. sh3bp5a ENSDARG00000100529 642 0.966 - - - - 0.966 - - - - SH3-domain binding protein 5a (BTK-associated) [Source:ZFIN;Acc:ZDB-GENE-111111-2]
76. itm2ca ENSDARG00000043448 1265 0.966 - - - - 0.966 - - - - integral membrane protein 2Ca [Source:ZFIN;Acc:ZDB-GENE-040718-284]
77. tarsl2 ENSDARG00000092774 505 0.966 - - - - 0.966 - - - - threonyl-tRNA synthetase-like 2 [Source:ZFIN;Acc:ZDB-GENE-081104-490]
78. otx2 766 0.966 - - - - 0.966 - - - - orthodenticle homeobox 2, transcript variant X2
79. BAZ1A ENSDARG00000063233, ENSDARG00000099745 1432 0.966 - - - - 0.966 - - - - bromodomain adjacent to zinc finger domain, 1A [Source:ZFIN;Acc:ZDB-GENE-030131-6105]
80. rbpja ENSDARG00000003398 1309 0.966 - - - - 0.966 - - - - recombination signal binding protein for immunoglobulin kappa J region a [Source:ZFIN;Acc:ZDB-GENE-031117-1]
81. ttc13 ENSDARG00000063242 1360 0.965 - - - - 0.965 - - - - tetratricopeptide repeat domain 13 [Source:ZFIN;Acc:ZDB-GENE-080722-25]
82. sptlc1 ENSDARG00000042995, ENSDARG00000112519 1291 0.965 - - - - 0.965 - - - - serine palmitoyltransferase, long chain base subunit 1 [Source:ZFIN;Acc:ZDB-GENE-050522-61]
83. mad2l1 ENSDARG00000004713 3398 0.965 - - - - 0.965 - - - - MAD2 mitotic arrest deficient-like 1 (yeast) [Source:ZFIN;Acc:ZDB-GENE-030515-3]
84. mtor ENSDARG00000053196 2156 0.965 - - - - 0.965 - - - - mechanistic target of rapamycin kinase [Source:ZFIN;Acc:ZDB-GENE-030131-2974]
85. atp1b4 ENSDARG00000053262 1337 0.965 - - - - 0.965 - - - - ATPase Na+/K+ transporting subunit beta 4 [Source:ZFIN;Acc:ZDB-GENE-070412-1]
86. nsl1 ENSDARG00000024471 1269 0.964 - - - - 0.964 - - - - NSL1, MIS12 kinetochore complex component [Source:ZFIN;Acc:ZDB-GENE-041014-362]
87. exosc10 ENSDARG00000037708, ENSDARG00000115953 1121 0.964 - - - - 0.964 - - - - exosome component 10 [Source:ZFIN;Acc:ZDB-GENE-040426-781]
88. si:ch73-86n18.1 ENSDARG00000056379, ENSDARG00000112771 2391 0.964 - - - - 0.964 - - - - si:ch73-86n18.1 [Source:ZFIN;Acc:ZDB-GENE-141216-19]
89. cdk5 ENSDARG00000056683 1998 0.964 - - - - 0.964 - - - - cyclin-dependent kinase 5 [Source:ZFIN;Acc:ZDB-GENE-010131-2]
90. SLC7A5 ENSDARG00000099265, ENSDARG00000115845 2319 0.964 - - - - 0.964 - - - - solute carrier family 7 (amino acid transporter light chain, L system), member 5 [Source:ZFIN;Acc:ZDB-GENE-080818-4]
91. cog4 ENSDARG00000054264 785 0.964 - - - - 0.964 - - - - component of oligomeric golgi complex 4 [Source:ZFIN;Acc:ZDB-GENE-060312-33]
92. ANKRD50 ENSDARG00000045666 1756 0.964 - - - - 0.964 - - - - ankyrin repeat domain 50 [Source:HGNC Symbol;Acc:HGNC:29223]
93. USP24 ENSDARG00000059925 1294 0.964 - - - - 0.964 - - - - ubiquitin specific peptidase 24 [Source:ZFIN;Acc:ZDB-GENE-030131-4356]
94. WIPF3 WIPF3 804 0.964 - - - - 0.964 - - - -
95. sf3b3_1 ENSDARG00000103553 1191 0.964 - - - - 0.964 - - - - splicing factor 3b, subunit 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2901]
96. sh3bgrl3 ENSDARG00000098075 3071 0.964 - - - - 0.964 - - - - SH3 domain binding glutamate-rich protein like 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1059]
97. ESCO1 ENSDARG00000077057 1112 0.963 - - - - 0.963 - - - - establishment of sister chromatid cohesion N-acetyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-130530-818]
98. rnaseh1 ENSDARG00000042571 922 0.963 - - - - 0.963 - - - - ribonuclease H1 [Source:ZFIN;Acc:ZDB-GENE-040718-407]
99. pitrm1 ENSDARG00000038563, ENSDARG00000115745 1321 0.963 - - - - 0.963 - - - - pitrilysin metallopeptidase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2876]
100. thoc7 ENSDARG00000015394 3824 0.963 - - - - 0.963 - - - - THO complex 7 [Source:ZFIN;Acc:ZDB-GENE-040801-17]

There are 1026 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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