Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for exosc1

Gene Name Gene ID Reads Annotation
exosc1 ENSDARG00000059841 6895 exosome component 1 [Source:ZFIN;Acc:ZDB-GENE-080926-3]










Genes with expression patterns similar to exosc1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. exosc1 ENSDARG00000059841 6895 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 exosome component 1 [Source:ZFIN;Acc:ZDB-GENE-080926-3]
2. cyfip1 ENSDARG00000044345 5483 3.191 - 0.785 - - - 0.742 0.851 - 0.813 cytoplasmic FMR1 interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8557]
3. hagh ENSDARG00000025338 2911 2.475 - 0.808 - - - 0.764 0.903 - - hydroxyacylglutathione hydrolase [Source:ZFIN;Acc:ZDB-GENE-030131-8921]
4. ctnna1 ENSDARG00000102441 7984 2.456 - 0.833 - - - 0.746 0.877 - - catenin (cadherin-associated protein), alpha 1 [Source:ZFIN;Acc:ZDB-GENE-991207-24]
5. hgs ENSDARG00000020960 3574 2.451 - 0.822 - - - 0.747 0.882 - - hepatocyte growth factor-regulated tyrosine kinase substrate [Source:ZFIN;Acc:ZDB-GENE-030131-6107]
6. sepw1 17630 2.431 - 0.740 - - - - 0.943 - 0.748 selenoprotein W, 1
7. tm9sf2 ENSDARG00000003866, ENSDARG00000115213 3888 2.417 - 0.813 - - - - 0.765 - 0.839 transmembrane 9 superfamily member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6302]
8. BRK1 ENSDARG00000041974 6430 2.404 - 0.779 - - - 0.753 - - 0.872 BRICK1, SCAR/WAVE actin-nucleating complex subunit [Source:ZFIN;Acc:ZDB-GENE-040625-77]
9. pgrmc1 ENSDARG00000054172 5423 2.385 - 0.789 - - - 0.746 0.850 - - progesterone receptor membrane component 1 [Source:ZFIN;Acc:ZDB-GENE-041114-91]
10. gmfb ENSDARG00000028327 6522 2.336 - 0.761 - - - 0.711 0.864 - - glia maturation factor, beta [Source:ZFIN;Acc:ZDB-GENE-040426-2114]
11. sdc4 ENSDARG00000059906 10105 2.335 - 0.868 - - - - 0.716 - 0.751 syndecan 4 [Source:ZFIN;Acc:ZDB-GENE-061111-1]
12. wasf2 ENSDARG00000024209 5338 2.329 - 0.729 - - - 0.703 0.897 - - WAS protein family, member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-865]
13. pi4k2b ENSDARG00000013881 1337 2.328 - 0.714 - - - - 0.756 - 0.858 phosphatidylinositol 4-kinase type 2 beta [Source:ZFIN;Acc:ZDB-GENE-070112-990]
14. gorasp2 ENSDARG00000015126 3923 2.301 - - - 0.702 - - 0.731 - 0.868 golgi reassembly stacking protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1659]
15. fn1 fn1 2538 2.273 - 0.790 - - - 0.738 0.745 - -
16. bin3 ENSDARG00000099651 3295 2.175 0.725 0.725 - - - - 0.725 - - bridging integrator 3 [Source:ZFIN;Acc:ZDB-GENE-030131-2696]
17. PARD3B_1 PARD3B_1 1735 1.784 - - - - - - 0.920 - 0.864
18. furina ENSDARG00000062909, ENSDARG00000117158 6313 1.748 - 0.834 - - - - 0.914 - - furin (paired basic amino acid cleaving enzyme) a [Source:ZFIN;Acc:ZDB-GENE-040901-1]
19. ndfip1 ENSDARG00000013979, ENSDARG00000111470, ENSDARG00000112351 2550 1.739 - - - - - - 0.855 - 0.884 Nedd4 family interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2767]
20. pof1b ENSDARG00000054060 2355 1.728 - - - - - - 0.839 - 0.889 POF1B, actin binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-4287]
21. nup188 ENSDARG00000030022 2398 1.712 - 0.858 - - - - - - 0.854 nucleoporin 188 [Source:ZFIN;Acc:ZDB-GENE-030131-7184]
22. ube2h ENSDARG00000000019 9900 1.707 - - - - - - 0.854 - 0.853 ubiquitin-conjugating enzyme E2H (UBC8 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-030616-67]
23. ptenb ENSDARG00000056623 5783 1.694 - 0.829 - - - - - - 0.865 phosphatase and tensin homolog B [Source:ZFIN;Acc:ZDB-GENE-030616-47]
24. SERP1_1 ENSDARG00000076223 6668 1.685 - 0.768 - - - - 0.917 - - stress associated endoplasmic reticulum protein 1 [Source:HGNC Symbol;Acc:HGNC:10759]
25. bcap31 ENSDARG00000044972 8708 1.672 - - - - - - 0.841 - 0.831 B cell receptor associated protein 31 [Source:ZFIN;Acc:ZDB-GENE-030616-63]
26. zfand5b ENSDARG00000002271 4145 1.668 - 0.780 - - - - - - 0.888 zinc finger, AN1-type domain 5b [Source:ZFIN;Acc:ZDB-GENE-040426-875]
27. mpdu1a ENSDARG00000035562, ENSDARG00000109966 1169 1.662 - 0.800 - - - - 0.862 - - mannose-P-dolichol utilization defect 1a [Source:ZFIN;Acc:ZDB-GENE-040912-9]
28. kpna3 ENSDARG00000052641 5347 1.661 - 0.771 - - - - - - 0.890 karyopherin alpha 3 (importin alpha 4) [Source:ZFIN;Acc:ZDB-GENE-030616-541]
29. atp6v0ca ENSDARG00000057853 23277 1.661 - - - - - 0.742 0.919 - - ATPase H+ transporting V0 subunit ca [Source:ZFIN;Acc:ZDB-GENE-020419-23]
30. ptbp1a ENSDARG00000019362 6290 1.657 - - - - - 0.821 0.836 - - polypyrimidine tract binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-050522-492]
31. ensab ENSDARG00000061644 2436 1.653 - - - - - - 0.810 - 0.843 endosulfine alpha b [Source:ZFIN;Acc:ZDB-GENE-060526-294]
32. cnn3a ENSDARG00000099510 6063 1.651 - - - - - - 0.841 - 0.810 calponin 3, acidic a [Source:ZFIN;Acc:ZDB-GENE-030131-5130]
33. pcbd1 ENSDARG00000031981 3373 1.646 - - - - - 0.742 0.904 - - pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha [Source:ZFIN;Acc:ZDB-GENE-040426-1787]
34. col6a2 ENSDARG00000061436 5063 1.646 - 0.848 - - - 0.798 - - - collagen, type VI, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-070501-7]
35. hn1l hn1l 8861 1.646 - - - - - - 0.748 - 0.898
36. tpst1 ENSDARG00000073872 2490 1.641 - - - - - 0.756 0.885 - - tyrosylprotein sulfotransferase 1 [Source:ZFIN;Acc:ZDB-GENE-000210-10]
37. ACTR3 ENSDARG00000091138 1739 1.641 - - 0.765 - - - 0.876 - - ARP3 actin related protein 3 homolog [Source:ZFIN;Acc:ZDB-GENE-040428-2]
38. itgb1b.1 ENSDARG00000053232 4721 1.64 - 0.800 - - - - 0.840 - - integrin, beta 1b.1 [Source:ZFIN;Acc:ZDB-GENE-060803-3]
39. uhmk1 ENSDARG00000059575 1486 1.64 - 0.780 - - - - - - 0.860 U2AF homology motif (UHM) kinase 1 [Source:ZFIN;Acc:ZDB-GENE-060929-1014]
40. cpsf3 ENSDARG00000027649 6897 1.635 - - - - - 0.770 - - 0.865 cleavage and polyadenylation specific factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3275]
41. blvrb ENSDARG00000096829 3296 1.634 - 0.780 - - - - 0.854 - - biliverdin reductase B [Source:ZFIN;Acc:ZDB-GENE-030131-1516]
42. ch1073-291c23.1 2426 1.634 - - - - - - 0.752 - 0.882 ch1073-291c23.1, transcript variant X6
43. WDR44 ENSDARG00000060249, ENSDARG00000114185, ENSDARG00000114247, ENSDARG00000117103 2545 1.628 - 0.785 - - - - 0.843 - - WD repeat domain 44 [Source:NCBI gene;Acc:569045]
44. slc25a1b ENSDARG00000076381 6213 1.623 - - - - - 0.766 0.857 - - slc25a1 solute carrier family 25 (mitochondrial carrier; citrate transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-130114-1]
45. ppp1r13l ENSDARG00000013777 2260 1.622 0.768 - - - - - 0.854 - - protein phosphatase 1, regulatory subunit 13 like [Source:ZFIN;Acc:ZDB-GENE-050327-33]
46. nudt9 ENSDARG00000087927 1148 1.618 - - - - - - 0.781 - 0.837 nudix (nucleoside diphosphate linked moiety X)-type motif 9 [Source:ZFIN;Acc:ZDB-GENE-040426-2669]
47. slc1a5 ENSDARG00000099186 7580 1.615 - - - - - - 0.822 - 0.793 solute carrier family 1 (neutral amino acid transporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-070501-4]
48. pafah1b1a ENSDARG00000032013 3183 1.615 - 0.790 - - - - 0.825 - - platelet-activating factor acetylhydrolase 1b, regulatory subunit 1a [Source:ZFIN;Acc:ZDB-GENE-040116-2]
49. tecra ENSDARG00000101585 609 1.613 - 0.791 - - - - 0.822 - - trans-2,3-enoyl-CoA reductase a [Source:ZFIN;Acc:ZDB-GENE-090930-1]
50. esrp1 ENSDARG00000011245 2097 1.61 - - - - - - 0.755 - 0.855 epithelial splicing regulatory protein 1 [Source:ZFIN;Acc:ZDB-GENE-070112-1732]
51. ef1 1343 1.61 - 0.766 - - - - - - 0.844 E74-like factor 1 (ets domain transcription factor), transcript variant X4
52. gadd45ab ENSDARG00000104571, ENSDARG00000110532 770 1.609 - 0.852 - - - - - 0.757 - growth arrest and DNA-damage-inducible, alpha, b [Source:ZFIN;Acc:ZDB-GENE-040704-60]
53. twf1b ENSDARG00000011661 630 1.608 0.821 - - - - - - 0.787 - twinfilin actin-binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-040711-3]
54. rps6ka3a ENSDARG00000035556, ENSDARG00000116641 3608 1.607 - - - - - 0.727 0.880 - - ribosomal protein S6 kinase a, polypeptide 3a [Source:ZFIN;Acc:ZDB-GENE-030219-119]
55. abracl ENSDARG00000042876 10208 1.607 - - - - - - 0.848 - 0.759 ABRA C-terminal like [Source:ZFIN;Acc:ZDB-GENE-030131-8594]
56. dpp3 ENSDARG00000020676 2393 1.607 - - 0.757 - - - - - 0.850 dipeptidyl-peptidase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-1247]
57. cnn2 ENSDARG00000035858 18201 1.607 - - - - - 0.745 0.862 - - calponin 2 [Source:ZFIN;Acc:ZDB-GENE-030131-542]
58. si:ch211-191j22.3 ENSDARG00000095459 959 1.605 - 0.758 - - - - - - 0.847 si:ch211-191j22.3 [Source:ZFIN;Acc:ZDB-GENE-030131-4242]
59. ppm1h ENSDARG00000063684 1446 1.602 - 0.876 - - - - 0.726 - - protein phosphatase, Mg2+/Mn2+ dependent, 1H [Source:ZFIN;Acc:ZDB-GENE-061027-190]
60. mtpn ENSDARG00000104018 4264 1.602 0.780 - - - - - 0.822 - - myotrophin [Source:ZFIN;Acc:ZDB-GENE-040426-2166]
61. phrf1 ENSDARG00000075252 1982 1.601 - 0.713 - - - - - - 0.888 PHD and ring finger domains 1 [Source:ZFIN;Acc:ZDB-GENE-030131-624]
62. tax1bp3 ENSDARG00000059177 4324 1.6 - - - - - 0.810 0.790 - - Tax1 (human T-cell leukemia virus type I) binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2830]
63. ube2e1 ENSDARG00000116649 10656 1.6 - 0.892 - - - 0.708 - - - ubiquitin-conjugating enzyme E2E 1 [Source:ZFIN;Acc:ZDB-GENE-071004-16]
64. mtdha ENSDARG00000014159, ENSDARG00000115030 9903 1.599 - - - - - 0.795 0.804 - - metadherin a [Source:ZFIN;Acc:ZDB-GENE-030616-615]
65. zgc:171775 ENSDARG00000058381, ENSDARG00000114470 5760 1.598 - - - - - - 0.764 - 0.834 zgc:171775 [Source:ZFIN;Acc:ZDB-GENE-030131-4309]
66. col6a6 col6a6 1165 1.597 - - - - - 0.829 0.768 - -
67. b3gnt2b ENSDARG00000091902 4125 1.596 - - - - - 0.756 0.840 - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2b [Source:ZFIN;Acc:ZDB-GENE-050913-158]
68. adam10a ENSDARG00000053468 9308 1.595 0.726 - - - - - 0.869 - - ADAM metallopeptidase domain 10a [Source:ZFIN;Acc:ZDB-GENE-040917-2]
69. fkbp8 ENSDARG00000001734 1709 1.592 0.738 - - - - - - - 0.854 FK506 binding protein 8 [Source:ZFIN;Acc:ZDB-GENE-040426-1849]
70. gapdhs ENSDARG00000039914 8760 1.591 - 0.718 - - - - - - 0.873 glyceraldehyde-3-phosphate dehydrogenase, spermatogenic [Source:ZFIN;Acc:ZDB-GENE-020913-1]
71. tpd52l2b ENSDARG00000013655 9460 1.589 - - - - - 0.749 - - 0.840 tumor protein D52-like 2b [Source:ZFIN;Acc:ZDB-GENE-030131-822]
72. ovol1 1037 1.588 - - - - - - 0.855 0.733 - ovo-like zinc finger 1, transcript variant X1
73. srebf2 ENSDARG00000063438 1982 1.586 - - - - - - 0.714 - 0.872 sterol regulatory element binding transcription factor 2 [Source:ZFIN;Acc:ZDB-GENE-070410-8]
74. myl12.2 ENSDARG00000025326 1887 1.586 - 0.734 - - - - - - 0.852 myosin, light chain 12, genome duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9028]
75. necap2 ENSDARG00000046002 4372 1.586 - - - - - - 0.729 - 0.857 NECAP endocytosis associated 2 [Source:ZFIN;Acc:ZDB-GENE-050522-67]
76. bsg ENSDARG00000019881 11894 1.585 - - - - - 0.732 0.853 - - basigin [Source:ZFIN;Acc:ZDB-GENE-030131-9638]
77. smad2 ENSDARG00000006389 646 1.584 0.735 - - - - - - - 0.849 SMAD family member 2 [Source:ZFIN;Acc:ZDB-GENE-990603-7]
78. GPR108 ENSDARG00000096651 1734 1.582 - - - - - - 0.737 - 0.845 G protein-coupled receptor 108 [Source:ZFIN;Acc:ZDB-GENE-121214-129]
79. ywhabb ENSDARG00000075758 23104 1.582 0.727 - - - - - 0.855 - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide b [Source:ZFIN;Acc:ZDB-GENE-040426-2160]
80. lgals2b ENSDARG00000038153 2196 1.58 - 0.731 - - - - 0.849 - - lectin, galactoside-binding, soluble, 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1590]
81. snx9b ENSDARG00000069302, ENSDARG00000116107 5673 1.579 0.713 0.866 - - - - - - - sorting nexin 9b [Source:ZFIN;Acc:ZDB-GENE-031118-50]
82. si:ch211-10d23.5 ENSDARG00000095510 2632 1.577 - 0.725 - - - - - - 0.852 si:ch211-10d23.5 [Source:ZFIN;Acc:ZDB-GENE-090313-10]
83. eps8l1 1598 1.576 - - - - - 0.804 0.772 - - eps8-like1, transcript variant X3
84. TCEB3 2429 1.576 - 0.851 - - - - 0.725 - - transcription elongation factor B (SIII), polypeptide 3
85. aldh6a1 ENSDARG00000053485 7744 1.576 - 0.703 - - - 0.873 - - - aldehyde dehydrogenase 6 family, member A1 [Source:ZFIN;Acc:ZDB-GENE-030131-9192]
86. arhgdia ENSDARG00000043795 14642 1.575 - - - - - - 0.799 - 0.776 Rho GDP dissociation inhibitor (GDI) alpha [Source:ZFIN;Acc:ZDB-GENE-040426-2816]
87. degs2 ENSDARG00000042544 1912 1.574 - 0.752 - - - - 0.822 - - delta(4)-desaturase, sphingolipid 2 [Source:ZFIN;Acc:ZDB-GENE-080228-1]
88. C18H12orf23 C18H12orf23 5362 1.573 - 0.733 - - - - - - 0.840
89. brd4 ENSDARG00000078904 5367 1.571 - - - - - - 0.746 - 0.825 bromodomain containing 4 [Source:ZFIN;Acc:ZDB-GENE-030131-267]
90. lepre1 lepre1 5346 1.567 - 0.769 - - - - - - 0.798
91. aqp12 ENSDARG00000043279 1881 1.566 - 0.713 - - - - 0.853 - - aquaporin 12 [Source:ZFIN;Acc:ZDB-GENE-040718-310]
92. copa ENSDARG00000004173 3977 1.565 - 0.803 - - - - 0.762 - - coatomer protein complex, subunit alpha [Source:ZFIN;Acc:ZDB-GENE-020905-2]
93. gpx1a ENSDARG00000018146, ENSDARG00000114736 4652 1.562 - - - - - - 0.780 - 0.782 glutathione peroxidase 1a [Source:ZFIN;Acc:ZDB-GENE-030410-1]
94. dad1 ENSDARG00000102105 14788 1.562 - - - - - - 0.779 - 0.783 defender against cell death 1 [Source:ZFIN;Acc:ZDB-GENE-060503-233]
95. rhot1a ENSDARG00000099996 2059 1.562 - - - - - - - 0.715 0.847 ras homolog family member T1a [Source:ZFIN;Acc:ZDB-GENE-030131-5354]
96. CU915738.1 CU915738.1 3723 1.561 - - - - - - 0.837 - 0.724
97. DYNC1I2 DYNC1I2 4131 1.56 - 0.754 - - - 0.806 - - -
98. hebp2 ENSDARG00000042630 2308 1.56 - - - - - - 0.721 - 0.839 heme binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-914]
99. tmem9b ENSDARG00000025693 2693 1.559 - - - - - 0.843 0.716 - - TMEM9 domain family, member B [Source:ZFIN;Acc:ZDB-GENE-030131-4656]
100. si:ch211-208h7.4 si:ch211-208h7.4 1334 1.558 - - - - - - - 0.717 0.841

There are 1716 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA