Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for exd3

Gene Name Gene ID Reads Annotation
exd3 ENSDARG00000063140 119 exonuclease 3'-5' domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-091204-349]










Genes with expression patterns similar to exd3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. exd3 ENSDARG00000063140 119 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 exonuclease 3'-5' domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-091204-349]
2. capn7 ENSDARG00000102987 386 2.675 0.881 - - - - 0.832 - 0.962 - calpain 7 [Source:ZFIN;Acc:ZDB-GENE-111111-1]
3. gpr37l1a ENSDARG00000006079 422 1.966 0.984 - - - - - - 0.982 - G protein-coupled receptor 37 like 1a [Source:ZFIN;Acc:ZDB-GENE-110411-20]
4. ap2m1b ENSDARG00000033899 317 1.949 0.990 - - - - - - 0.959 - adaptor related protein complex 2 subunit mu 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1103]
5. ZNF337_21 ZNF337_21 53 1.946 - 0.951 - - - - - 0.995 -
6. wnt8b ENSDARG00000006911 98 1.932 - 0.942 - - - - - 0.990 - wingless-type MMTV integration site family, member 8b [Source:ZFIN;Acc:ZDB-GENE-990415-279]
7. C17H14orf1 C17H14orf1 256 1.91 0.997 0.913 - - - - - - -
8. pole ENSDARG00000058533, ENSDARG00000115430 381 1.905 0.981 - - - - - - 0.924 - polymerase (DNA directed), epsilon [Source:ZFIN;Acc:ZDB-GENE-070705-557]
9. cpt1a cpt1a 674 1.893 0.951 - - - - - - 0.942 -
10. CABZ01073174.1 CABZ01073174.1 581 1.887 0.901 - - - - - - 0.986 -
11. celf3b ENSDARG00000006983 171 1.87 - 0.895 - - - - - 0.975 - cugbp, Elav-like family member 3b [Source:ZFIN;Acc:ZDB-GENE-110408-50]
12. CABZ01078515.1 CABZ01078515.1 25 1.858 - 0.874 - - - 0.984 - - -
13. Mar-06 Mar-06 953 1.85 0.949 - - - - - - 0.901 -
14. prrg4 ENSDARG00000030753 1008 1.848 0.874 - - - - - - 0.974 - proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane) [Source:ZFIN;Acc:ZDB-GENE-050417-112]
15. me3 ENSDARG00000002305 3305 1.845 0.986 - - - - - - 0.859 - malic enzyme 3, NADP(+)-dependent, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-041111-294]
16. cwc25 ENSDARG00000003382 2134 1.837 0.917 - - - - - - 0.920 - CWC25 spliceosome-associated protein homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-2817]
17. sntb1 ENSDARG00000041729 163 1.828 - - - - - - 0.850 0.978 - syntrophin, basic 1 [Source:ZFIN;Acc:ZDB-GENE-040704-13]
18. utp3 ENSDARG00000056720 922 1.808 0.911 - - - - - - 0.897 - UTP3, small subunit (SSU) processome component, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040912-163]
19. C16H8orf76 C16H8orf76 329 1.806 - - - - - - 0.831 0.975 -
20. pogza ENSDARG00000054778 1495 1.804 - - - - - - 0.849 0.955 - pogo transposable element derived with ZNF domain a [Source:ZFIN;Acc:ZDB-GENE-040914-76]
21. rnf13 ENSDARG00000019438 1560 1.804 0.856 - - - - - - 0.948 - ring finger protein 13 [Source:ZFIN;Acc:ZDB-GENE-040426-772]
22. TMEM14A ENSDARG00000095157 611 1.799 0.890 - - - - - - 0.909 - transmembrane protein 14A [Source:HGNC Symbol;Acc:HGNC:21076]
23. si:ch211-254c8.2 233 1.79 - - - - - 0.900 0.890 - - si:ch211-254c8.2, transcript variant X4
24. kbtbd4 ENSDARG00000069271, ENSDARG00000109347 253 1.776 - 0.919 - - - 0.857 - - - kelch repeat and BTB (POZ) domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-040426-937]
25. pigq ENSDARG00000038097 486 1.773 0.969 - - - - 0.804 - - - phosphatidylinositol glycan anchor biosynthesis, class Q [Source:ZFIN;Acc:ZDB-GENE-030131-9793]
26. dvl2 ENSDARG00000056184 1525 1.756 0.911 - - - - - - 0.845 - dishevelled segment polarity protein 2 [Source:ZFIN;Acc:ZDB-GENE-041118-20]
27. speg speg 334 1.754 - - - - - 0.765 - 0.989 -
28. slc1a7a ENSDARG00000034940 149 1.753 - - 0.828 - - - 0.925 - - solute carrier family 1 (glutamate transporter), member 7a [Source:ZFIN;Acc:ZDB-GENE-061009-24]
29. ZNF710 ZNF710 766 1.751 0.973 0.778 - - - - - - -
30. dlx1a ENSDARG00000013125 142 1.749 - 0.942 - - - - 0.807 - - distal-less homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-990415-48]
31. esrrgb ENSDARG00000011696 108 1.748 0.977 0.771 - - - - - - - estrogen-related receptor gamma b [Source:ZFIN;Acc:ZDB-GENE-040616-4]
32. lnx2b ENSDARG00000071478 654 1.747 - 0.753 - - - - - 0.994 - ligand of numb-protein X 2b [Source:ZFIN;Acc:ZDB-GENE-040426-2500]
33. fopnl ENSDARG00000071198 1002 1.745 - 0.942 - - - - 0.803 - - fgfr1op N-terminal like [Source:ZFIN;Acc:ZDB-GENE-101124-1]
34. celsr1b ENSDARG00000058259 1219 1.743 - 0.761 - - - - - 0.982 - cadherin EGF LAG seven-pass G-type receptor 1b [Source:ZFIN;Acc:ZDB-GENE-050823-4]
35. TTF1_3 TTF1_3 215 1.739 - 0.886 - - - 0.853 - - -
36. prkci ENSDARG00000021225 2472 1.735 0.957 - - - - 0.778 - - - protein kinase C, iota [Source:ZFIN;Acc:ZDB-GENE-011105-1]
37. swt1 ENSDARG00000094010 472 1.73 - 0.820 - - - 0.910 - - - SWT1 RNA endoribonuclease homolog [Source:ZFIN;Acc:ZDB-GENE-041015-373]
38. UFSP1 ENSDARG00000061610 81 1.725 - - - - - 0.954 0.771 - - UFM1-specific peptidase 1 (non-functional) [Source:ZFIN;Acc:ZDB-GENE-070410-124]
39. slka ENSDARG00000061525 1678 1.725 0.899 - - - - 0.826 - - - STE20-like kinase a [Source:ZFIN;Acc:ZDB-GENE-050411-66]
40. ERGIC2 ENSDARG00000051936, ENSDARG00000111918 244 1.721 - 0.886 - - - 0.835 - - - ERGIC and golgi 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1331]
41. zgc:55558 ENSDARG00000013161, ENSDARG00000111354 1687 1.716 - - - - - 0.762 - 0.954 - zgc:55558 [Source:ZFIN;Acc:ZDB-GENE-040426-740]
42. usp45 ENSDARG00000075013 227 1.711 - - - - - - 0.746 0.965 - ubiquitin specific peptidase 45 [Source:ZFIN;Acc:ZDB-GENE-100211-2]
43. znrd1 ENSDARG00000036070 684 1.711 - - - - - - 0.757 0.954 - zinc ribbon domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050320-131]
44. si:dkey-30k6.5 ENSDARG00000057238 617 1.705 - 0.757 - - - - - 0.948 - si:dkey-30k6.5 [Source:ZFIN;Acc:ZDB-GENE-091204-299]
45. lrrc40 ENSDARG00000017708 1156 1.701 - 0.766 - - - - - 0.935 - leucine rich repeat containing 40 [Source:ZFIN;Acc:ZDB-GENE-030131-6062]
46. si:dkeyp-51b9.3 ENSDARG00000092379 1374 1.699 - - - - - 0.909 0.790 - - si:dkeyp-51b9.3 [Source:ZFIN;Acc:ZDB-GENE-081104-469]
47. camsap1b ENSDARG00000035122 492 1.695 - 0.773 - - - - - 0.922 - calmodulin regulated spectrin-associated protein 1b [Source:ZFIN;Acc:ZDB-GENE-070705-301]
48. dcun1d4 ENSDARG00000092394 258 1.693 - 0.924 - - - - 0.769 - - DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-041014-248]
49. zgc:163143 ENSDARG00000076437 166 1.683 - - - - - 0.754 - 0.929 - zgc:163143 [Source:ZFIN;Acc:ZDB-GENE-070410-143]
50. igfbp2b ENSDARG00000031422 679 1.681 - 0.770 - - - - - 0.911 - insulin-like growth factor binding protein 2b [Source:ZFIN;Acc:ZDB-GENE-090107-3]
51. zc3h3 ENSDARG00000090751 206 1.68 - - - - - 0.713 - 0.967 - zinc finger CCCH-type containing 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9399]
52. tceb1a 969 1.678 0.952 - - - - - 0.726 - - transcription elongation factor B (SIII), polypeptide 1a, transcript variant X4
53. si:dkey-25e12.3 ENSDARG00000055365, ENSDARG00000113269 87 1.677 - - - - - 0.886 0.791 - - si:dkey-25e12.3 [Source:ZFIN;Acc:ZDB-GENE-041001-132]
54. si:ch1073-396h14.1 ENSDARG00000057590 503 1.674 0.844 0.830 - - - - - - - si:ch1073-396h14.1 [Source:ZFIN;Acc:ZDB-GENE-070705-6]
55. loh12cr1 loh12cr1 346 1.669 - 0.879 - - - - 0.790 - -
56. znf687b ENSDARG00000019299 71 1.669 - 0.894 - - - 0.775 - - - zinc finger protein 687b [Source:ZFIN;Acc:ZDB-GENE-041111-214]
57. slc46a3 ENSDARG00000077313 14 1.66 - 0.942 - - - - - - 0.718 solute carrier family 46, member 3 [Source:ZFIN;Acc:ZDB-GENE-100105-2]
58. mgaa ENSDARG00000078784 1344 1.635 - - - - - - 0.739 0.896 - MGA, MAX dimerization protein a [Source:ZFIN;Acc:ZDB-GENE-030603-1]
59. fhl3b ENSDARG00000104315 359 1.631 - 0.834 - - - - 0.797 - - four and a half LIM domains 3b [Source:ZFIN;Acc:ZDB-GENE-030131-8356]
60. C1H4orf27 C1H4orf27 1961 1.63 0.869 - - - - - - 0.761 -
61. mkrn4 ENSDARG00000028295 2768 1.607 0.772 - - - - - 0.835 - - makorin, ring finger protein, 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5954]
62. qki2 ENSDARG00000010018 2230 1.598 0.749 - - - - - - 0.849 - QKI, KH domain containing, RNA binding 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1462]
63. ireb2 ENSDARG00000021466 699 1.597 - 0.711 - - - - - 0.886 - iron-responsive element binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-051205-1]
64. si:dkey-189d19.2 si:dkey-189d19.2 45 1.589 - 0.774 - - - 0.815 - - -
65. SB:CB827 SB:CB827 245 1.581 - 0.789 - - - - 0.792 - -
66. tom1l2 ENSDARG00000009217, ENSDARG00000111492 1639 1.58 0.778 - - - - - 0.802 - - target of myb1 like 2 membrane trafficking protein [Source:ZFIN;Acc:ZDB-GENE-061013-3]
67. si:ch211-210c8.7 ENSDARG00000092856 884 1.572 0.745 - - - - - - 0.827 - si:ch211-210c8.7 [Source:ZFIN;Acc:ZDB-GENE-090313-81]
68. nob1 ENSDARG00000016080 2483 1.56 0.773 - - - - - 0.787 - - NIN1 (RPN12) binding protein 1 homolog [Source:ZFIN;Acc:ZDB-GENE-030131-3112]
69. CPNE4 CPNE4 268 1.559 - 0.855 - - - 0.704 - - -
70. ago3b ENSDARG00000063079 1441 1.547 0.766 - - - - - 0.781 - - argonaute RISC catalytic component 3b [Source:ZFIN;Acc:ZDB-GENE-060503-452]
71. si:dkey-163m14.7 65 1.54 - - - - - 0.813 0.727 - - si:dkey-163m14.7
72. si:rp71-61h23.4 1921 1.536 0.814 - - - - - 0.722 - - si:rp71-61h23.4
73. pip5k2 pip5k2 5743 1.53 0.797 - - - - - - 0.733 -
74. man1a1 ENSDARG00000005652 877 1.523 0.706 - - - - - - 0.817 - mannosidase, alpha, class 1A, member 1 [Source:ZFIN;Acc:ZDB-GENE-041014-321]
75. spsb4b ENSDARG00000040538 372 1.515 - - 0.725 - - 0.790 - - - splA/ryanodine receptor domain and SOCS box containing 4b [Source:ZFIN;Acc:ZDB-GENE-040801-213]
76. slc12a2 ENSDARG00000104573 59 1.5 - - - - - 0.745 0.755 - - solute carrier family 12 (sodium/potassium/chloride transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-040625-53]
77. ARHGAP35 2409 1.48 0.769 - - - - - - 0.711 - Rho GTPase activating protein 35b, transcript variant X2
78. hif1an ENSDARG00000031915 2098 1.476 - 0.718 - - - - - 0.758 - hypoxia inducible factor 1 subunit alpha inhibitor [Source:ZFIN;Acc:ZDB-GENE-030826-19]
79. si:ch73-127k6.1 si:ch73-127k6.1 114 1.469 - 0.709 - - - - 0.760 - -
80. stk10 ENSDARG00000101894 1587 1.465 0.752 - - - - - 0.713 - - serine/threonine kinase 10 [Source:ZFIN;Acc:ZDB-GENE-040426-1136]
81. rnft1 ENSDARG00000015917, ENSDARG00000116783 1197 1.44 - - - - - 0.705 - 0.735 - ring finger protein, transmembrane 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2324]
82. fam83d ENSDARG00000077883 897 1.431 - - - - - 0.709 0.722 - - family with sequence similarity 83, member D [Source:ZFIN;Acc:ZDB-GENE-041111-264]
83. brf1a ENSDARG00000017835 206 0.998 0.998 - - - - - - - - BRF1, RNA polymerase III transcription initiation factor a [Source:ZFIN;Acc:ZDB-GENE-030131-6334]
84. gpr78 gpr78 135 0.998 0.998 - - - - - - - -
85. si:dkey-7i1.4 si:dkey-7i1.4 77 0.997 0.997 - - - - - - - -
86. TMEM55B TMEM55B 76 0.997 0.997 - - - - - - - -
87. si:dkey-58f10.12 ENSDARG00000092680 258 0.997 0.997 - - - - - - - - si:dkey-58f10.12 [Source:ZFIN;Acc:ZDB-GENE-060526-314]
88. si:ch211-191a16.5 ENSDARG00000096545 45 0.997 0.997 - - - - - - - - si:ch211-191a16.5 [Source:ZFIN;Acc:ZDB-GENE-121214-56]
89. si:ch211-229b6.1 ENSDARG00000093422 151 0.997 0.997 - - - - - - - - si:ch211-229b6.1 [Source:ZFIN;Acc:ZDB-GENE-060503-311]
90. taf12 ENSDARG00000104030, ENSDARG00000115004 163 0.997 0.997 - - - - - - - - TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-031030-5]
91. TMEM220 ENSDARG00000088981 28 0.997 0.997 - - - - - - - - transmembrane protein 220 [Source:ZFIN;Acc:ZDB-GENE-131121-194]
92. mnd1 ENSDARG00000074451 182 0.997 0.997 - - - - - - - - meiotic nuclear divisions 1 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040801-116]
93. CABZ01020207.1 CABZ01020207.1 145 0.997 0.997 - - - - - - - -
94. tvp23b ENSDARG00000057060 361 0.997 0.997 - - - - - - - - trans-golgi network vesicle protein 23 homolog B (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050522-404]
95. TMEM151A ENSDARG00000077986 78 0.997 0.997 - - - - - - - - transmembrane protein 151A [Source:HGNC Symbol;Acc:HGNC:28497]
96. plekhg7 ENSDARG00000062855 308 0.996 0.996 - - - - - - - - pleckstrin homology domain containing, family G (with RhoGef domain) member 7 [Source:ZFIN;Acc:ZDB-GENE-070410-15]
97. moxd1 ENSDARG00000031136, ENSDARG00000111773 112 0.996 0.996 - - - - - - - - monooxygenase, DBH-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9320]
98. pou5f3 ENSDARG00000044774 212 0.996 0.996 - - - - - - - - POU domain, class 5, transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-980526-485]
99. CU468896.2 CU468896.2 38 0.996 0.996 - - - - - - - -
100. zgc:101562 ENSDARG00000040179 90 0.996 0.996 - - - - - - - - zgc:101562 [Source:ZFIN;Acc:ZDB-GENE-041010-74]

There are 1900 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA