Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for exd2

Gene Name Gene ID Reads Annotation
exd2 ENSDARG00000016117 342 exonuclease 3'-5' domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6387]










Genes with expression patterns similar to exd2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. exd2 ENSDARG00000016117 342 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 exonuclease 3'-5' domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6387]
2. JMJD1C JMJD1C 289 2.433 - 0.735 - 0.965 - 0.733 - - -
3. zgc:165515 ENSDARG00000116300 182 1.878 - - - 0.962 - - - 0.916 - zgc:165515 [Source:ZFIN;Acc:ZDB-GENE-030131-1772]
4. tdrd3 ENSDARG00000025421 633 1.758 - - - 0.964 - - - 0.794 - tudor domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-19]
5. il2rb ENSDARG00000075720 116 1.728 - - - - - 0.821 - 0.907 - interleukin 2 receptor, beta [Source:ZFIN;Acc:ZDB-GENE-080108-2]
6. tapt1b ENSDARG00000061143, ENSDARG00000109798, ENSDARG00000112241 482 1.727 - - - 0.970 - - 0.757 - - transmembrane anterior posterior transformation 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4025]
7. cep76 ENSDARG00000058319 143 1.72 - - - 0.969 - - - 0.751 - centrosomal protein 76 [Source:ZFIN;Acc:ZDB-GENE-070820-5]
8. dmbx1b ENSDARG00000002510 351 1.72 - - - 0.880 - - - 0.840 - diencephalon/mesencephalon homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-050417-97]
9. atxn7l3 ENSDARG00000029331 531 1.712 - - - 0.778 - - 0.934 - - ataxin 7-like 3 [Source:ZFIN;Acc:ZDB-GENE-030616-253]
10. si:ch73-257c13.2 ENSDARG00000074305 197 1.71 - 0.788 - - - - - 0.922 - si:ch73-257c13.2 [Source:ZFIN;Acc:ZDB-GENE-081104-269]
11. si:ch73-387e10.3 si:ch73-387e10.3 517 1.708 - - - 0.934 - 0.774 - - -
12. DHX36 ENSDARG00000101059 314 1.701 - - - 0.959 - - 0.742 - - DEAH (Asp-Glu-Ala-His) box polypeptide 36 [Source:ZFIN;Acc:ZDB-GENE-050419-20]
13. rexo1 ENSDARG00000026986 770 1.7 - 0.735 - 0.965 - - - - - REX1, RNA exonuclease 1 homolog [Source:ZFIN;Acc:ZDB-GENE-030131-1650]
14. trmt2b ENSDARG00000033967 127 1.697 - - - 0.977 - 0.720 - - - tRNA methyltransferase 2 homolog B [Source:ZFIN;Acc:ZDB-GENE-050809-101]
15. KPNA6 ENSDARG00000044980 543 1.681 - - - 0.933 - - - 0.748 - karyopherin alpha 6 (importin alpha 7) [Source:ZFIN;Acc:ZDB-GENE-130530-626]
16. zgc:113364 ENSDARG00000037192 339 1.676 - 0.794 - 0.882 - - - - - zgc:113364 [Source:ZFIN;Acc:ZDB-GENE-050410-5]
17. CDKN1C CDKN1C 667 1.66 - - - 0.953 - - 0.707 - -
18. si:dkey-270b7.1 si:dkey-270b7.1 83 1.658 0.742 - - - - - - 0.916 -
19. nkx2.3 ENSDARG00000039095, ENSDARG00000113490 493 1.643 0.708 - - 0.935 - - - - - NK2 homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-990415-178]
20. srrm2 ENSDARG00000037965 1967 1.635 - - - 0.925 - 0.710 - - - serine/arginine repetitive matrix 2 [Source:ZFIN;Acc:ZDB-GENE-050522-399]
21. kifap3a ENSDARG00000008639 721 1.634 - 0.772 - 0.862 - - - - - kinesin-associated protein 3a [Source:ZFIN;Acc:ZDB-GENE-040912-74]
22. srrd ENSDARG00000059028 173 1.632 0.763 - - - - - 0.869 - - SRR1 domain containing [Source:ZFIN;Acc:ZDB-GENE-060825-269]
23. nabp1a ENSDARG00000004692, ENSDARG00000115485 1843 1.632 - - - 0.917 - - 0.715 - - nucleic acid binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-041212-71]
24. SNORD27 SNORD27 181 1.626 - - - - - 0.790 - 0.836 -
25. fezf2 ENSDARG00000070677 224 1.622 - - - 0.842 - - - 0.780 - FEZ family zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-001103-3]
26. fam175a fam175a 224 1.611 - 0.737 - - - - - 0.874 -
27. rgs7bpa ENSDARG00000060601 138 1.607 - 0.705 - - - - - 0.902 - regulator of G protein signaling 7 binding protein a [Source:ZFIN;Acc:ZDB-GENE-060929-380]
28. SMG9 ENSDARG00000076627 525 1.588 - 0.824 - - - - - 0.764 - smg9 nonsense mediated mRNA decay factor [Source:ZFIN;Acc:ZDB-GENE-030131-9385]
29. metap1d ENSDARG00000019715, ENSDARG00000112086 236 1.585 - - - 0.858 - 0.727 - - - methionyl aminopeptidase type 1D (mitochondrial) [Source:ZFIN;Acc:ZDB-GENE-050522-71]
30. spopla ENSDARG00000010563 775 1.582 0.842 0.740 - - - - - - - speckle-type POZ protein-like a [Source:ZFIN;Acc:ZDB-GENE-050320-3]
31. sp5 sp5 622 1.582 - - - - - 0.707 - 0.875 -
32. ddx11 ENSDARG00000011072 325 1.581 - 0.709 - - - - - 0.872 - DEAD/H (Asp-Glu-Ala-Asp/His) box helicase 11 [Source:ZFIN;Acc:ZDB-GENE-041114-191]
33. osgep ENSDARG00000045846 738 1.575 - 0.819 - - - - - 0.756 - O-sialoglycoprotein endopeptidase [Source:ZFIN;Acc:ZDB-GENE-030131-7880]
34. inip ENSDARG00000028523 1925 1.574 - - - 0.867 - 0.707 - - - ints3 and nabp interacting protein [Source:ZFIN;Acc:ZDB-GENE-040426-961]
35. exosc10 ENSDARG00000037708, ENSDARG00000115953 1121 1.571 - 0.715 - 0.856 - - - - - exosome component 10 [Source:ZFIN;Acc:ZDB-GENE-040426-781]
36. adrm1 ENSDARG00000058560, ENSDARG00000113912 1728 1.571 - 0.715 - 0.856 - - - - - adhesion regulating molecule 1 [Source:ZFIN;Acc:ZDB-GENE-040426-905]
37. pax3a ENSDARG00000010192 626 1.553 - 0.739 - - - - - 0.814 - paired box 3a [Source:ZFIN;Acc:ZDB-GENE-980526-52]
38. PPM1J ENSDARG00000074690 109 1.552 - - - - - 0.817 0.735 - - protein phosphatase, Mg2+/Mn2+ dependent, 1J [Source:ZFIN;Acc:ZDB-GENE-091230-9]
39. mkln1 ENSDARG00000025576 1122 1.55 0.787 0.763 - - - - - - - muskelin 1, intracellular mediator containing kelch motifs [Source:ZFIN;Acc:ZDB-GENE-030131-3942]
40. tbrg1 ENSDARG00000074996 733 1.542 - - - 0.748 - - 0.794 - - transforming growth factor beta regulator 1 [Source:ZFIN;Acc:ZDB-GENE-080220-62]
41. CABZ01034082.1 ENSDARG00000099583 2237 1.527 - - - 0.765 - - - 0.762 -
42. cbx2 ENSDARG00000044938 1576 1.524 0.772 - - - - 0.752 - - - chromobox homolog 2 (Drosophila Pc class) [Source:ZFIN;Acc:ZDB-GENE-030131-5502]
43. ddb1 ENSDARG00000074431 1054 1.524 - 0.742 - 0.782 - - - - - damage-specific DNA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1272]
44. pgrmc2 ENSDARG00000030237, ENSDARG00000110406 791 1.514 - - - 0.722 - - 0.792 - - progesterone receptor membrane component 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2102]
45. timm50 ENSDARG00000031098, ENSDARG00000109900 988 1.514 - 0.720 - - - - - 0.794 - translocase of inner mitochondrial membrane 50 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-1618]
46. polr3a ENSDARG00000102569 1072 1.506 - 0.702 - 0.804 - - - - - polymerase (RNA) III (DNA directed) polypeptide A [Source:ZFIN;Acc:ZDB-GENE-050208-103]
47. syt16 ENSDARG00000030761 322 1.496 - - - - - 0.714 0.782 - - synaptotagmin XVI [Source:ZFIN;Acc:ZDB-GENE-090313-210]
48. st3gal2 ENSDARG00000112898 370 1.496 - - - - - - 0.704 0.792 - ST3 beta-galactoside alpha-2,3-sialyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-050419-181]
49. CEP250 CEP250 1175 1.493 - - - - - - 0.780 0.713 -
50. sms ENSDARG00000008155 1192 1.493 - 0.765 - 0.728 - - - - - spermine synthase [Source:ZFIN;Acc:ZDB-GENE-040625-150]
51. ENDOD1_5 ENDOD1_5 8723 1.49 - 0.758 - 0.732 - - - - -
52. srek1 ENSDARG00000009764, ENSDARG00000114600 319 1.489 0.726 0.763 - - - - - - - splicing regulatory glutamine/lysine-rich protein 1 [Source:ZFIN;Acc:ZDB-GENE-040801-132]
53. WDR77 2463 1.486 - 0.710 - 0.776 - - - - - WD repeat domain 77
54. WDR53 ENSDARG00000079659 485 1.483 - - - 0.777 - - - 0.706 - WD repeat domain 53 [Source:ZFIN;Acc:ZDB-GENE-131121-294]
55. efnb2b_1 ENSDARG00000074050 1094 1.481 - - - 0.766 - - - 0.715 - ephrin-B2b [Source:ZFIN;Acc:ZDB-GENE-010618-1]
56. SLC29A2 ENSDARG00000001767, ENSDARG00000115816 1392 1.47 - 0.735 - - - 0.735 - - - solute carrier family 29 (equilibrative nucleoside transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-050220-15]
57. tfap4 ENSDARG00000103923 2203 1.467 - - - - - 0.724 0.743 - - transcription factor AP-4 (activating enhancer binding protein 4) [Source:ZFIN;Acc:ZDB-GENE-090810-1]
58. arid2 ENSDARG00000007413 4413 1.446 - 0.731 - - - - 0.715 - - AT rich interactive domain 2 (ARID, RFX-like) [Source:ZFIN;Acc:ZDB-GENE-030131-6311]
59. ulk3 ENSDARG00000101661 69 0.974 - - - 0.974 - - - - - unc-51 like kinase 3 [Source:ZFIN;Acc:ZDB-GENE-070410-33]
60. SYNGAP1_1 SYNGAP1_1 66 0.973 - - - 0.973 - - - - -
61. CABZ01029822.1 ENSDARG00000086931 1654 0.971 - - - 0.971 - - - - - uncharacterized LOC100004582 [Source:NCBI gene;Acc:100004582]
62. mctp2a ENSDARG00000001414 307 0.971 - - - 0.971 - - - - - multiple C2 domains, transmembrane 2a [Source:ZFIN;Acc:ZDB-GENE-040724-63]
63. TTC17 ENSDARG00000044812 124 0.969 - - - 0.969 - - - - - tetratricopeptide repeat domain 17 [Source:ZFIN;Acc:ZDB-GENE-100422-15]
64. ftr65 202 0.969 - - - 0.969 - - - - - finTRIM family, member 65
65. spns2 ENSDARG00000061017, ENSDARG00000114768 301 0.969 - - - 0.969 - - - - - spinster homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-5843]
66. dpf2 ENSDARG00000012219 666 0.968 - - - 0.968 - - - - - D4, zinc and double PHD fingers family 2 [Source:ZFIN;Acc:ZDB-GENE-041024-2]
67. zgc:165525 zgc:165525 207 0.968 - - - 0.968 - - - - -
68. ZCCHC2 ENSDARG00000067950 204 0.967 - - - 0.967 - - - - - zinc finger, CCHC domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-070912-269]
69. TP53BP2 TP53BP2 217 0.967 - - - 0.967 - - - - -
70. aanat2 ENSDARG00000079802 175 0.967 - - - 0.967 - - - - - arylalkylamine N-acetyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-991019-6]
71. nr4a2b ENSDARG00000044532 103 0.967 - - - 0.967 - - - - - nuclear receptor subfamily 4, group A, member 2b [Source:ZFIN;Acc:ZDB-GENE-040718-103]
72. wasb ENSDARG00000026350 139 0.967 - - - 0.967 - - - - - Wiskott-Aldrich syndrome (eczema-thrombocytopenia) b [Source:ZFIN;Acc:ZDB-GENE-030131-7098]
73. ptk6b ENSDARG00000059956 44 0.967 - - - 0.967 - - - - - PTK6 protein tyrosine kinase 6b [Source:ZFIN;Acc:ZDB-GENE-060929-1150]
74. rs1 rs1 70 0.967 - - - 0.967 - - - - -
75. mns1 ENSDARG00000060169, ENSDARG00000110835 283 0.967 - - - 0.967 - - - - - meiosis-specific nuclear structural 1 [Source:ZFIN;Acc:ZDB-GENE-030521-42]
76. gnav1 ENSDARG00000043006 305 0.967 - - - 0.967 - - - - - guanine nucleotide binding protein (G protein) alpha v1 [Source:ZFIN;Acc:ZDB-GENE-081031-92]
77. tuba7l ENSDARG00000104643 33 0.967 - - - 0.967 - - - - - tubulin, alpha 7 like [Source:ZFIN;Acc:ZDB-GENE-040704-78]
78. syt3 ENSDARG00000075830 430 0.966 - - - 0.966 - - - - - synaptotagmin III [Source:ZFIN;Acc:ZDB-GENE-090601-1]
79. CU639413.2 CU639413.2 33 0.966 - - - 0.966 - - - - -
80. ADCY3 ADCY3 537 0.966 - - - 0.966 - - - - -
81. rxrba ENSDARG00000078954 85 0.966 - - - 0.966 - - - - - retinoid x receptor, beta a [Source:ZFIN;Acc:ZDB-GENE-980526-436]
82. tmem104 ENSDARG00000088560 859 0.966 - - - 0.966 - - - - - transmembrane protein 104 [Source:ZFIN;Acc:ZDB-GENE-070822-4]
83. BX000999.4_1 BX000999.4_1 222 0.966 - - - 0.966 - - - - -
84. ppfia2 ENSDARG00000013000 45 0.966 - - - 0.966 - - - - - protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7905]
85. fam49a ENSDARG00000006672 939 0.965 - - - 0.965 - - - - - family with sequence similarity 49, member A [Source:ZFIN;Acc:ZDB-GENE-031002-50]
86. si:dkey-100n10.2 101 0.965 - - - 0.965 - - - - - si:dkey-100n10.2
87. si:dkey-283b15.3 si:dkey-283b15.3 81 0.965 - - - 0.965 - - - - -
88. syngr3a ENSDARG00000014871 405 0.965 - - - 0.965 - - - - - synaptogyrin 3a [Source:ZFIN;Acc:ZDB-GENE-050522-541]
89. slc3a1 ENSDARG00000017165 136 0.965 - - - 0.965 - - - - - solute carrier family 3 (amino acid transporter heavy chain), member 1 [Source:ZFIN;Acc:ZDB-GENE-090313-225]
90. zgc:173705 ENSDARG00000105137, ENSDARG00000114437 83 0.964 - - - 0.964 - - - - - zgc:173705 [Source:ZFIN;Acc:ZDB-GENE-080212-6]
91. znf710a ENSDARG00000014680 582 0.964 - - - 0.964 - - - - - zinc finger protein 710a [Source:ZFIN;Acc:ZDB-GENE-030131-5559]
92. si:ch1073-127d16.1 ENSDARG00000087674 105 0.964 - - - 0.964 - - - - - si:ch1073-127d16.1 [Source:ZFIN;Acc:ZDB-GENE-120214-30]
93. supt20 ENSDARG00000078658 713 0.964 - - - 0.964 - - - - - SPT20 homolog, SAGA complex component [Source:ZFIN;Acc:ZDB-GENE-091204-264]
94. HTRA4 ENSDARG00000005943 77 0.964 - - - 0.964 - - - - - HtrA serine peptidase 4 [Source:ZFIN;Acc:ZDB-GENE-131120-192]
95. rapgef5a ENSDARG00000075271 282 0.964 - - - 0.964 - - - - - Rap guanine nucleotide exchange factor (GEF) 5a [Source:ZFIN;Acc:ZDB-GENE-030131-7681]
96. eef1a1a ENSDARG00000039502 234 0.964 - - - 0.964 - - - - - eukaryotic translation elongation factor 1 alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-8278]
97. PARP12 PARP12 77 0.963 - - - 0.963 - - - - -
98. lhx9 ENSDARG00000056979 249 0.963 - - - 0.963 - - - - - LIM homeobox 9 [Source:ZFIN;Acc:ZDB-GENE-050417-210]
99. CABZ01051991.1 CABZ01051991.1 346 0.963 - - - 0.963 - - - - -
100. gng2_1 ENSDARG00000056831 113 0.963 - - - 0.963 - - - - - guanine nucleotide binding protein (G protein), gamma 2 [Source:ZFIN;Acc:ZDB-GENE-050417-59]

There are 1414 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA