Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for esf1

Gene Name Gene ID Reads Annotation
esf1 ENSDARG00000008740 1206 ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-4917]










Genes with expression patterns similar to esf1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. esf1 ENSDARG00000008740 1206 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-4917]
2. dctn3 ENSDARG00000041363 3351 2.723 - - 0.971 - 0.983 - 0.769 - - dynactin 3 (p22) [Source:ZFIN;Acc:ZDB-GENE-040704-65]
3. sptlc1 ENSDARG00000042995, ENSDARG00000112519 1291 1.746 - - - 0.752 0.994 - - - - serine palmitoyltransferase, long chain base subunit 1 [Source:ZFIN;Acc:ZDB-GENE-050522-61]
4. rab1a rab1a 14138 1.737 - - 0.832 - 0.905 - - - -
5. BX855614.1 ENSDARG00000094551 1294 1.73 - - 0.967 - - - 0.763 - - si:dkey-262g12.9 [Source:NCBI gene;Acc:555910]
6. stx6 ENSDARG00000042742, ENSDARG00000115635 1208 1.719 - - - - 0.993 - 0.726 - - syntaxin 6 [Source:ZFIN;Acc:ZDB-GENE-030131-858]
7. armc9 ENSDARG00000087299 459 1.719 - - - - 0.996 - 0.723 - - armadillo repeat containing 9 [Source:ZFIN;Acc:ZDB-GENE-100922-67]
8. WIPF3 WIPF3 804 1.712 - - - - 0.994 - 0.718 - -
9. slc20a1b ENSDARG00000010641 2564 1.71 - 0.718 - - 0.992 - - - - solute carrier family 20 (phosphate transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-030131-260]
10. ndufaf2 ENSDARG00000069286, ENSDARG00000114828 1563 1.696 - 0.735 0.961 - - - - - - NADH:ubiquinone oxidoreductase complex assembly factor 2 [Source:ZFIN;Acc:ZDB-GENE-040808-28]
11. RANBP3 RANBP3 2513 1.684 - 0.706 - - 0.978 - - - -
12. eif4bb ENSDARG00000010194, ENSDARG00000112432 12555 1.645 - 0.711 - - 0.934 - - - - eukaryotic translation initiation factor 4Bb [Source:ZFIN;Acc:ZDB-GENE-030131-8563]
13. NID1 NID1 6192 1.643 - - 0.905 0.738 - - - - -
14. glulb ENSDARG00000100003, ENSDARG00000113742 19292 1.517 - - 0.789 - 0.728 - - - - glutamate-ammonia ligase (glutamine synthase) b [Source:ZFIN;Acc:ZDB-GENE-030131-8417]
15. SCO1 ENSDARG00000067593, ENSDARG00000113312 258 1.499 0.798 - - - - 0.701 - - - SCO1 cytochrome c oxidase assembly protein [Source:ZFIN;Acc:ZDB-GENE-140909-1]
16. arid3b ENSDARG00000104034 16303 1.491 - - 0.787 - 0.704 - - - - AT rich interactive domain 3B (BRIGHT-like) [Source:ZFIN;Acc:ZDB-GENE-070209-182]
17. lace1b lace1b 126 1.463 - - - - - 0.724 0.739 - -
18. SERBP1 SERBP1 9276 1.46 - 0.701 - - 0.759 - - - -
19. ccdc53 982 0.996 - - - - 0.996 - - - - coiled-coil domain containing 53
20. wu:fc26g07 wu:fc26g07 1165 0.996 - - - - 0.996 - - - -
21. il12rb2l ENSDARG00000074850 407 0.996 - - - - 0.996 - - - - interleukin 12 receptor, beta 2a, like [Source:ZFIN;Acc:ZDB-GENE-080107-6]
22. SNORA70 SNORA70 511 0.996 - - - - 0.996 - - - -
23. CABZ01027552.1 CABZ01027552.1 760 0.996 - - - - 0.996 - - - -
24. USP2_1 USP2_1 544 0.996 - - - - 0.996 - - - -
25. ticrr ENSDARG00000045605 739 0.995 - - - - 0.995 - - - - TopBP1-interacting, checkpoint, and replication regulator [Source:ZFIN;Acc:ZDB-GENE-040728-1]
26. si:ch73-86n18.1 ENSDARG00000056379, ENSDARG00000112771 2391 0.995 - - - - 0.995 - - - - si:ch73-86n18.1 [Source:ZFIN;Acc:ZDB-GENE-141216-19]
27. adcyap1b ENSDARG00000027740 1539 0.995 - - - - 0.995 - - - - adenylate cyclase activating polypeptide 1b [Source:ZFIN;Acc:ZDB-GENE-041010-89]
28. si:dkey-251i10.2 ENSDARG00000093957 4424 0.995 - - - - 0.995 - - - - si:dkey-251i10.2 [Source:ZFIN;Acc:ZDB-GENE-050506-102]
29. nkx2.3 ENSDARG00000039095, ENSDARG00000113490 493 0.995 - - - - 0.995 - - - - NK2 homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-990415-178]
30. USP24 ENSDARG00000059925 1294 0.995 - - - - 0.995 - - - - ubiquitin specific peptidase 24 [Source:ZFIN;Acc:ZDB-GENE-030131-4356]
31. mtor ENSDARG00000053196 2156 0.995 - - - - 0.995 - - - - mechanistic target of rapamycin kinase [Source:ZFIN;Acc:ZDB-GENE-030131-2974]
32. tarsl2 ENSDARG00000092774 505 0.995 - - - - 0.995 - - - - threonyl-tRNA synthetase-like 2 [Source:ZFIN;Acc:ZDB-GENE-081104-490]
33. sh3bp5a ENSDARG00000100529 642 0.995 - - - - 0.995 - - - - SH3-domain binding protein 5a (BTK-associated) [Source:ZFIN;Acc:ZDB-GENE-111111-2]
34. BAZ1A ENSDARG00000063233, ENSDARG00000099745 1432 0.995 - - - - 0.995 - - - - bromodomain adjacent to zinc finger domain, 1A [Source:ZFIN;Acc:ZDB-GENE-030131-6105]
35. rbpja ENSDARG00000003398 1309 0.995 - - - - 0.995 - - - - recombination signal binding protein for immunoglobulin kappa J region a [Source:ZFIN;Acc:ZDB-GENE-031117-1]
36. zgc:110699 ENSDARG00000017474 381 0.994 - - - - 0.994 - - - - zgc:110699 [Source:ZFIN;Acc:ZDB-GENE-050522-487]
37. cdkn1a ENSDARG00000076554 591 0.994 - - - - 0.994 - - - - cyclin-dependent kinase inhibitor 1A [Source:ZFIN;Acc:ZDB-GENE-070705-7]
38. cdk5 ENSDARG00000056683 1998 0.994 - - - - 0.994 - - - - cyclin-dependent kinase 5 [Source:ZFIN;Acc:ZDB-GENE-010131-2]
39. cog4 ENSDARG00000054264 785 0.994 - - - - 0.994 - - - - component of oligomeric golgi complex 4 [Source:ZFIN;Acc:ZDB-GENE-060312-33]
40. rnaseh1 ENSDARG00000042571 922 0.994 - - - - 0.994 - - - - ribonuclease H1 [Source:ZFIN;Acc:ZDB-GENE-040718-407]
41. thoc7 ENSDARG00000015394 3824 0.994 - - - - 0.994 - - - - THO complex 7 [Source:ZFIN;Acc:ZDB-GENE-040801-17]
42. kdm6bb ENSDARG00000056929 4807 0.994 - - - - 0.994 - - - - lysine (K)-specific demethylase 6B, b [Source:ZFIN;Acc:ZDB-GENE-040724-166]
43. otx2 766 0.994 - - - - 0.994 - - - - orthodenticle homeobox 2, transcript variant X2
44. gab1 ENSDARG00000037018 1489 0.994 - - - - 0.994 - - - - GRB2-associated binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2674]
45. atp1b4 ENSDARG00000053262 1337 0.994 - - - - 0.994 - - - - ATPase Na+/K+ transporting subunit beta 4 [Source:ZFIN;Acc:ZDB-GENE-070412-1]
46. ttc13 ENSDARG00000063242 1360 0.993 - - - - 0.993 - - - - tetratricopeptide repeat domain 13 [Source:ZFIN;Acc:ZDB-GENE-080722-25]
47. exosc10 ENSDARG00000037708, ENSDARG00000115953 1121 0.993 - - - - 0.993 - - - - exosome component 10 [Source:ZFIN;Acc:ZDB-GENE-040426-781]
48. znf280d ENSDARG00000077013 1387 0.993 - - - - 0.993 - - - - zinc finger protein 280D [Source:ZFIN;Acc:ZDB-GENE-030131-2260]
49. ESCO1 ENSDARG00000077057 1112 0.993 - - - - 0.993 - - - - establishment of sister chromatid cohesion N-acetyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-130530-818]
50. pitrm1 ENSDARG00000038563, ENSDARG00000115745 1321 0.993 - - - - 0.993 - - - - pitrilysin metallopeptidase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2876]
51. arhgap11a ENSDARG00000100019 1642 0.993 - - - - 0.993 - - - - Rho GTPase activating protein 11A [Source:ZFIN;Acc:ZDB-GENE-040426-2562]
52. clasp1a ENSDARG00000010280 1158 0.993 - - - - 0.993 - - - - cytoplasmic linker associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-081104-520]
53. sf3b3_1 ENSDARG00000103553 1191 0.993 - - - - 0.993 - - - - splicing factor 3b, subunit 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2901]
54. eif3d ENSDARG00000021257 1524 0.992 - - - - 0.992 - - - - eukaryotic translation initiation factor 3, subunit D [Source:ZFIN;Acc:ZDB-GENE-030131-8442]
55. nsl1 ENSDARG00000024471 1269 0.992 - - - - 0.992 - - - - NSL1, MIS12 kinetochore complex component [Source:ZFIN;Acc:ZDB-GENE-041014-362]
56. usp40 ENSDARG00000071197 825 0.992 - - - - 0.992 - - - - ubiquitin specific peptidase 40 [Source:ZFIN;Acc:ZDB-GENE-060518-5]
57. upb1 ENSDARG00000011521, ENSDARG00000116790 920 0.992 - - - - 0.992 - - - - ureidopropionase, beta [Source:ZFIN;Acc:ZDB-GENE-030131-1380]
58. clgn ENSDARG00000009315 993 0.992 - - - - 0.992 - - - - calmegin [Source:ZFIN;Acc:ZDB-GENE-060929-708]
59. mrgbp ENSDARG00000028894, ENSDARG00000110790 1316 0.992 - - - - 0.992 - - - - MRG/MORF4L binding protein [Source:ZFIN;Acc:ZDB-GENE-040426-1698]
60. AP3B1 2363 0.992 - - - - 0.992 - - - - adaptor related protein complex 3 beta 1 subunit
61. itm2ca ENSDARG00000043448 1265 0.992 - - - - 0.992 - - - - integral membrane protein 2Ca [Source:ZFIN;Acc:ZDB-GENE-040718-284]
62. mafk ENSDARG00000100947 1460 0.992 - - - - 0.992 - - - - v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog K [Source:ZFIN;Acc:ZDB-GENE-040624-9]
63. col11a1b ENSDARG00000009014 9998 0.992 - - - - 0.992 - - - - collagen, type XI, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-070912-607]
64. mrpl1 ENSDARG00000054606, ENSDARG00000114027 1457 0.992 - - - - 0.992 - - - - mitochondrial ribosomal protein L1 [Source:ZFIN;Acc:ZDB-GENE-060526-311]
65. sh3bgrl3 ENSDARG00000098075 3071 0.992 - - - - 0.992 - - - - SH3 domain binding glutamate-rich protein like 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1059]
66. pik3r3a ENSDARG00000103038 1132 0.991 - - - - 0.991 - - - - phosphoinositide-3-kinase, regulatory subunit 3a (gamma) [Source:ZFIN;Acc:ZDB-GENE-040426-1978]
67. pcif1 ENSDARG00000099084 2851 0.991 - - - - 0.991 - - - - PDX1 C-terminal inhibiting factor 1 [Source:ZFIN;Acc:ZDB-GENE-120920-2]
68. ptgr1 ENSDARG00000024877, ENSDARG00000115676 4312 0.991 - - - - 0.991 - - - - prostaglandin reductase 1 [Source:ZFIN;Acc:ZDB-GENE-041212-80]
69. sap130b ENSDARG00000079352 1468 0.991 - - - - 0.991 - - - - Sin3A-associated protein b [Source:ZFIN;Acc:ZDB-GENE-070912-570]
70. pik3cb ENSDARG00000075253 2075 0.99 - - - - 0.990 - - - - phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit beta [Source:ZFIN;Acc:ZDB-GENE-030131-1904]
71. prrc1 ENSDARG00000044304 1567 0.99 - - - - 0.990 - - - - proline-rich coiled-coil 1 [Source:ZFIN;Acc:ZDB-GENE-041024-9]
72. si:ch211-197h24.6 ENSDARG00000091631 1933 0.99 - - - - 0.990 - - - - si:ch211-197h24.6 [Source:ZFIN;Acc:ZDB-GENE-030131-1361]
73. SLC7A5 ENSDARG00000099265, ENSDARG00000115845 2319 0.99 - - - - 0.990 - - - - solute carrier family 7 (amino acid transporter light chain, L system), member 5 [Source:ZFIN;Acc:ZDB-GENE-080818-4]
74. nmt1a ENSDARG00000052966 5918 0.99 - - - - 0.990 - - - - N-myristoyltransferase 1a [Source:ZFIN;Acc:ZDB-GENE-050522-477]
75. nsfl1c ENSDARG00000087640 2226 0.99 - - - - 0.990 - - - - NSFL1 (p97) cofactor (p47) [Source:ZFIN;Acc:ZDB-GENE-041114-160]
76. ANKRD50 ENSDARG00000045666 1756 0.99 - - - - 0.990 - - - - ankyrin repeat domain 50 [Source:HGNC Symbol;Acc:HGNC:29223]
77. mrpl11 ENSDARG00000013075 2927 0.99 - - - - 0.990 - - - - mitochondrial ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040718-294]
78. lama4 ENSDARG00000020785 1522 0.99 - - - - 0.990 - - - - laminin, alpha 4 [Source:ZFIN;Acc:ZDB-GENE-040724-213]
79. prickle3 ENSDARG00000073996 840 0.99 - - - - 0.990 - - - - prickle homolog 3 [Source:ZFIN;Acc:ZDB-GENE-081105-86]
80. ARHGEF5 2727 0.99 - - - - 0.990 - - - - Rho guanine nucleotide exchange factor (GEF) 5, transcript variant X2
81. ipo4 ENSDARG00000041493 1578 0.99 - - - - 0.990 - - - - importin 4 [Source:ZFIN;Acc:ZDB-GENE-041014-307]
82. arfgef2 ENSDARG00000074702 1593 0.989 - - - - 0.989 - - - - ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited) [Source:ZFIN;Acc:ZDB-GENE-090312-50]
83. lamtor5 ENSDARG00000090194, ENSDARG00000115255 2539 0.989 - - - - 0.989 - - - - late endosomal/lysosomal adaptor, MAPK and MTOR activator 5 [Source:ZFIN;Acc:ZDB-GENE-110411-193]
84. cuedc1b ENSDARG00000054748 1638 0.989 - - - - 0.989 - - - - CUE domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-070424-29]
85. fbxw11b ENSDARG00000017230, ENSDARG00000112841 2593 0.988 - - - - 0.988 - - - - F-box and WD repeat domain containing 11b [Source:ZFIN;Acc:ZDB-GENE-040426-2903]
86. sox4a ENSDARG00000004588, ENSDARG00000096389 2213 0.988 - - - - 0.988 - - - - SRY (sex determining region Y)-box 4a [Source:ZFIN;Acc:ZDB-GENE-030131-8290]
87. arcn1b ENSDARG00000031214 4529 0.988 - - - - 0.988 - - - - archain 1b [Source:ZFIN;Acc:ZDB-GENE-040121-7]
88. bnip4 ENSDARG00000022832, ENSDARG00000117207 3100 0.987 - - - - 0.987 - - - - BCL2 interacting protein 4 [Source:ZFIN;Acc:ZDB-GENE-051113-212]
89. spry4 ENSDARG00000068732 2091 0.987 - - - - 0.987 - - - - sprouty homolog 4 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-010803-2]
90. esd ENSDARG00000019496 3192 0.987 - - - - 0.987 - - - - esterase D/formylglutathione hydrolase [Source:ZFIN;Acc:ZDB-GENE-050417-328]
91. glud1a ENSDARG00000008816, ENSDARG00000114252 3468 0.987 - - - - 0.987 - - - - glutamate dehydrogenase 1a [Source:ZFIN;Acc:ZDB-GENE-030114-2]
92. CT955967.1 ENSDARG00000099956 2885 0.987 - - - - 0.987 - - - -
93. elf2b ENSDARG00000079626, ENSDARG00000117064 3057 0.987 - - - - 0.987 - - - - E74-like factor 2b (ets domain transcription factor) [Source:ZFIN;Acc:ZDB-GENE-031215-1]
94. prdm1a ENSDARG00000002445 1340 0.987 - - 0.987 - - - - - - PR domain containing 1a, with ZNF domain [Source:ZFIN;Acc:ZDB-GENE-030131-2193]
95. tiprl ENSDARG00000032353 1045 0.985 - - 0.985 - - - - - - TIP41, TOR signaling pathway regulator-like (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-1611]
96. tbc1d10a tbc1d10a 462 0.985 - - 0.985 - - - - - -
97. eng2b eng2b 865 0.985 - - - - 0.985 - - - -
98. C6H2orf40 C6H2orf40 4224 0.985 - - - - 0.985 - - - -
99. pitx2 ENSDARG00000036194 2279 0.985 - - - - 0.985 - - - - paired-like homeodomain 2 [Source:ZFIN;Acc:ZDB-GENE-990714-27]
100. suv420h2 2186 0.985 - - - - 0.985 - - - - suppressor of variegation 4-20 homolog 2 (Drosophila)

There are 756 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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