Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for ern1

Gene Name Gene ID Reads Annotation
ern1 ENSDARG00000013997 473 endoplasmic reticulum to nucleus signaling 1 [Source:ZFIN;Acc:ZDB-GENE-050522-431]










Genes with expression patterns similar to ern1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ern1 ENSDARG00000013997 473 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 endoplasmic reticulum to nucleus signaling 1 [Source:ZFIN;Acc:ZDB-GENE-050522-431]
2. deptor ENSDARG00000040930 191 2.243 - 0.723 - 0.716 - 0.804 - - - DEP domain containing MTOR-interacting protein [Source:ZFIN;Acc:ZDB-GENE-061013-453]
3. lrrc47 ENSDARG00000053138 417 1.681 - 0.825 - - - 0.856 - - - leucine rich repeat containing 47 [Source:ZFIN;Acc:ZDB-GENE-060503-289]
4. ptpro ENSDARG00000100422, ENSDARG00000110470 1850 1.648 - 0.915 - - - 0.733 - - - protein tyrosine phosphatase, receptor type, O [Source:ZFIN;Acc:ZDB-GENE-070424-54]
5. tmem5 1630 1.617 - 0.820 - - - 0.797 - - - transmembrane protein 5
6. plk2b ENSDARG00000019130, ENSDARG00000111402 328 1.584 - 0.786 - - - 0.798 - - - polo-like kinase 2b (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-070720-17]
7. b2m ENSDARG00000053136 215 1.583 - - - - - 0.835 0.748 - - beta-2-microglobulin [Source:ZFIN;Acc:ZDB-GENE-980526-88]
8. USP31 ENSDARG00000074017 628 1.583 - 0.743 - - - 0.840 - - - ubiquitin specific peptidase 31 [Source:ZFIN;Acc:ZDB-GENE-100210-4]
9. CR847906.1 ENSDARG00000099493 88 1.576 - - - - - 0.850 - 0.726 - protein NLRC3-like [Source:NCBI gene;Acc:571651]
10. ppp1r14aa ENSDARG00000011239 980 1.57 - 0.756 - 0.814 - - - - - protein phosphatase 1, regulatory (inhibitor) subunit 14Aa [Source:ZFIN;Acc:ZDB-GENE-050417-413]
11. zgc:65895 ENSDARG00000034086 1258 1.569 - 0.794 - - - 0.775 - - - zgc:65895 [Source:ZFIN;Acc:ZDB-GENE-040426-1466]
12. trpc4apb ENSDARG00000020647 670 1.567 - - - 0.841 - 0.726 - - - transient receptor potential cation channel, subfamily C, member 4 associated protein b [Source:ZFIN;Acc:ZDB-GENE-000330-2]
13. mamdc1 mamdc1 156 1.56 - - - 0.718 - 0.842 - - -
14. retsatl ENSDARG00000034989 41 1.548 - 0.749 - - - 0.799 - - - retinol saturase (all-trans-retinol 13,14-reductase) like [Source:ZFIN;Acc:ZDB-GENE-051113-252]
15. PEG3_40 PEG3_40 186 1.542 - 0.717 - - - 0.825 - - -
16. si:ch211-163b2.4 ENSDARG00000094890 140 1.539 - - - - - 0.818 0.721 - - si:ch211-163b2.4 [Source:ZFIN;Acc:ZDB-GENE-081104-502]
17. dbpa ENSDARG00000063014 107 1.538 - 0.701 - - - 0.837 - - - D site albumin promoter binding protein a [Source:ZFIN;Acc:ZDB-GENE-060503-802]
18. hcfc1a ENSDARG00000015990, ENSDARG00000111404 59 1.536 - 0.742 - - - 0.794 - - - host cell factor C1a [Source:ZFIN;Acc:ZDB-GENE-030912-10]
19. zgc:66484 ENSDARG00000030478 167 1.527 - - - 0.762 - 0.765 - - - zgc:66484 [Source:ZFIN;Acc:ZDB-GENE-030131-5768]
20. si:dkey-264b2.3 19 1.517 - 0.701 - - - 0.816 - - - si:dkey-264b2.3, transcript variant X2
21. ndst3 ENSDARG00000041776 605 1.509 - - - - - 0.726 0.783 - - N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3 [Source:ZFIN;Acc:ZDB-GENE-090312-199]
22. dmtf1 ENSDARG00000025824, ENSDARG00000109819, ENSDARG00000110011 364 1.497 - - - 0.707 - 0.790 - - - cyclin D binding myb-like transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-040718-413]
23. AL954372.1 ENSDARG00000112499 589 1.496 - 0.762 - - - - 0.734 - -
24. stmn4 ENSDARG00000030106 518 1.478 - - - 0.716 - 0.762 - - - stathmin-like 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2732]
25. ust ENSDARG00000006044 322 1.458 - 0.727 - - - 0.731 - - - uronyl-2-sulfotransferase [Source:ZFIN;Acc:ZDB-GENE-041001-163]
26. spag1a ENSDARG00000004017 1140 1.44 - - - - - 0.723 0.717 - - sperm associated antigen 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9443]
27. CR388231.1 ENSDARG00000098710 153 1.438 - 0.706 - - - 0.732 - - -
28. TMEM185A TMEM185A 5505 1.427 - 0.710 - - - 0.717 - - -
29. SLC10A7 ENSDARG00000104508 996 1.426 - 0.718 - 0.708 - - - - - solute carrier family 10, member 7 [Source:ZFIN;Acc:ZDB-GENE-040801-5]
30. TNRC6B ENSDARG00000074161 2464 1.411 0.704 - - - - 0.707 - - - trinucleotide repeat containing 6b [Source:ZFIN;Acc:ZDB-GENE-030131-13]
31. SLC29A3 ENSDARG00000077828 382 0.927 - 0.927 - - - - - - - solute carrier family 29 (equilibrative nucleoside transporter), member 3 [Source:ZFIN;Acc:ZDB-GENE-081107-66]
32. znf574 ENSDARG00000087074 885 0.917 - 0.917 - - - - - - - zinc finger protein 574 [Source:ZFIN;Acc:ZDB-GENE-100922-259]
33. pdp2 ENSDARG00000058571, ENSDARG00000115915 464 0.915 - - - - - 0.915 - - - putative pyruvate dehydrogenase phosphatase isoenzyme 2 [Source:ZFIN;Acc:ZDB-GENE-000921-2]
34. FBXO40 FBXO40 194 0.909 - - - - - 0.909 - - -
35. mir133a-1 77 0.899 - - - - - 0.899 - - - microRNA 133a-1
36. MTERF MTERF 178 0.886 - 0.886 - - - - - - -
37. map3k19 ENSDARG00000094272 59 0.886 - 0.886 - - - - - - - mitogen-activated protein kinase kinase kinase 19 [Source:ZFIN;Acc:ZDB-GENE-081104-140]
38. si:dkeyp-79c2.1 42 0.885 - - - - - 0.885 - - - si:dkeyp-79c2.1, transcript variant X2
39. SDK2 SDK2 145 0.881 - 0.881 - - - - - - -
40. si:dkey-231k6.4 si:dkey-231k6.4 72 0.88 - - - - - 0.880 - - -
41. MIER3_1 MIER3_1 756 0.879 - - - - - 0.879 - - -
42. snw1 ENSDARG00000091563 263 0.877 - 0.877 - - - - - - - SNW domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-571]
43. inaa ENSDARG00000011862 115 0.877 - 0.877 - - - - - - - internexin neuronal intermediate filament protein, alpha a [Source:ZFIN;Acc:ZDB-GENE-060531-65]
44. mcm9 ENSDARG00000013528 212 0.876 - - - - - 0.876 - - - minichromosome maintenance 9 homologous recombination repair factor [Source:ZFIN;Acc:ZDB-GENE-041014-310]
45. yod1 ENSDARG00000008542 56 0.873 - 0.873 - - - - - - - YOD1 deubiquitinase [Source:ZFIN;Acc:ZDB-GENE-050417-217]
46. lmx1ba ENSDARG00000104815 376 0.873 - - - - - 0.873 - - - LIM homeobox transcription factor 1, beta a [Source:ZFIN;Acc:ZDB-GENE-050114-3]
47. ryk ENSDARG00000007231 1611 0.871 - - - - - 0.871 - - - receptor-like tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-070209-277]
48. dnaja1l dnaja1l 1536 0.869 - - - - - 0.869 - - -
49. TNS1 TNS1 628 0.869 - - - - - 0.869 - - -
50. CRTC2 ENSDARG00000074910 297 0.869 - - - - - 0.869 - - - CREB regulated transcription coactivator 2 [Source:ZFIN;Acc:ZDB-GENE-030131-2214]
51. C18H15orf38 C18H15orf38 370 0.868 - 0.868 - - - - - - -
52. GSG2 GSG2 1162 0.867 - - - - - 0.867 - - -
53. xpnpep3 ENSDARG00000007916 166 0.867 - - - - - 0.867 - - - X-prolyl aminopeptidase 3, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-040426-2076]
54. akap6 ENSDARG00000077295 1382 0.867 - - - - - 0.867 - - - A kinase (PRKA) anchor protein 6 [Source:ZFIN;Acc:ZDB-GENE-120207-2]
55. CR377211.1 ENSDARG00000079364 24 0.867 - - - - - 0.867 - - - olfactory receptor 2T2-like [Source:NCBI gene;Acc:103910036]
56. OTOP1 ENSDARG00000021566 443 0.865 - 0.865 - - - - - - - otopetrin 1 [Source:HGNC Symbol;Acc:HGNC:19656]
57. ftr51 ENSDARG00000029105 103 0.865 - 0.865 - - - - - - - finTRIM family, member 51 [Source:ZFIN;Acc:ZDB-GENE-081104-54]
58. brwd1 ENSDARG00000074747, ENSDARG00000111353 1008 0.864 - 0.864 - - - - - - - bromodomain and WD repeat domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041111-120]
59. rad54b ENSDARG00000092134 231 0.863 - - - - - 0.863 - - - RAD54 homolog B [Source:ZFIN;Acc:ZDB-GENE-060810-50]
60. slc22a2 ENSDARG00000030530 313 0.863 - - - - - 0.863 - - - solute carrier family 22 (organic cation transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2167]
61. PLEKHM3 ENSDARG00000030633 496 0.86 - - - - - 0.860 - - - pleckstrin homology domain containing, family M, member 3 [Source:ZFIN;Acc:ZDB-GENE-070912-382]
62. GPR125 GPR125 837 0.86 - - - - - - 0.860 - -
63. r3hcc1l ENSDARG00000089243 1254 0.86 - - - - - 0.860 - - - R3H domain and coiled-coil containing 1-like [Source:ZFIN;Acc:ZDB-GENE-030131-4156]
64. mc1r ENSDARG00000020237 108 0.859 - - - - - 0.859 - - - melanocortin 1 receptor [Source:ZFIN;Acc:ZDB-GENE-030502-1]
65. tsnaxip1 ENSDARG00000030512 197 0.859 - 0.859 - - - - - - - translin-associated factor X interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-070424-39]
66. eif3hb ENSDARG00000036116 203 0.859 - - - - - 0.859 - - - eukaryotic translation initiation factor 3, subunit H, b [Source:ZFIN;Acc:ZDB-GENE-051030-42]
67. cdk10 ENSDARG00000034256 166 0.857 - - - - - 0.857 - - - cyclin-dependent kinase 10 [Source:ZFIN;Acc:ZDB-GENE-050417-94]
68. tldc1 ENSDARG00000062951 174 0.856 - - - - - 0.856 - - - TBC/LysM-associated domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050419-140]
69. si:dkey-180p18.9 381 0.855 - - - - - 0.855 - - - si:dkey-180p18.9
70. GPR156 ENSDARG00000086215 126 0.855 - - - - - 0.855 - - - G protein-coupled receptor 156 [Source:ZFIN;Acc:ZDB-GENE-060201-2]
71. zbed4 ENSDARG00000024306, ENSDARG00000110788 513 0.854 - 0.854 - - - - - - - zinc finger, BED-type containing 4 [Source:ZFIN;Acc:ZDB-GENE-041210-305]
72. mcph1 ENSDARG00000058372 51 0.854 - - - - - 0.854 - - - microcephalin 1 [Source:ZFIN;Acc:ZDB-GENE-060421-6122]
73. nin ENSDARG00000060298 1558 0.854 - - - - - 0.854 - - - ninein (GSK3B interacting protein) [Source:ZFIN;Acc:ZDB-GENE-070725-1]
74. ube3c ENSDARG00000035978, ENSDARG00000112229 787 0.853 - - - - - 0.853 - - - ubiquitin protein ligase E3C [Source:ZFIN;Acc:ZDB-GENE-040426-1211]
75. cx34.4 ENSDARG00000075854 168 0.853 - - - - - 0.853 - - - connexin 34.4 [Source:ZFIN;Acc:ZDB-GENE-040406-3]
76. BX005368.2 BX005368.2 702 0.853 - - - - - 0.853 - - -
77. pld1b ENSDARG00000057125 325 0.849 - - - 0.849 - - - - - phospholipase D1b [Source:ZFIN;Acc:ZDB-GENE-070510-3]
78. si:ch73-386o14.1 si:ch73-386o14.1 82 0.848 - 0.848 - - - - - - -
79. flrt3 ENSDARG00000076895 3516 0.848 - - - - - 0.848 - - - fibronectin leucine rich transmembrane 3 [Source:ZFIN;Acc:ZDB-GENE-030131-1988]
80. BX897726.3 BX897726.3 220 0.848 - 0.848 - - - - - - -
81. ppp1r15a ENSDARG00000069135 871 0.847 - - - - - 0.847 - - - protein phosphatase 1, regulatory subunit 15A [Source:ZFIN;Acc:ZDB-GENE-030131-4408]
82. kif19 ENSDARG00000053026 124 0.847 - - - - - 0.847 - - - kinesin family member 19 [Source:ZFIN;Acc:ZDB-GENE-080215-2]
83. zbtb2b ENSDARG00000028086, ENSDARG00000110834 1609 0.847 - - - - - 0.847 - - - zinc finger and BTB domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-040426-2753]
84. naglu ENSDARG00000030156 378 0.846 - 0.846 - - - - - - - N-acetylglucosaminidase, alpha [Source:ZFIN;Acc:ZDB-GENE-100726-2]
85. ttc27 ENSDARG00000007918 1228 0.846 - - - - - 0.846 - - - tetratricopeptide repeat domain 27 [Source:ZFIN;Acc:ZDB-GENE-030102-1]
86. slc25a21 ENSDARG00000060564 344 0.846 - - - - - 0.846 - - - solute carrier family 25 (mitochondrial oxoadipate carrier), member 21 [Source:ZFIN;Acc:ZDB-GENE-060929-664]
87. SB:CB827 SB:CB827 245 0.846 - - - - - 0.846 - - -
88. polr2gl ENSDARG00000056127 1771 0.846 - 0.846 - - - - - - - polymerase (RNA) II (DNA directed) polypeptide G-like [Source:ZFIN;Acc:ZDB-GENE-030131-2808]
89. si:dkey-258p11.2 si:dkey-258p11.2 171 0.845 - - - - - 0.845 - - -
90. FAM126B 588 0.845 - - - - - 0.845 - - - family with sequence similarity 126 member B
91. sesn1 ENSDARG00000020693 198 0.845 - 0.845 - - - - - - - sestrin 1 [Source:ZFIN;Acc:ZDB-GENE-040718-408]
92. fnbp1l ENSDARG00000020131 79 0.843 - 0.843 - - - - - - - formin binding protein 1-like [Source:ZFIN;Acc:ZDB-GENE-040801-155]
93. TRABD2A ENSDARG00000089701 401 0.843 - 0.843 - - - - - - - TraB domain containing 2A [Source:ZFIN;Acc:ZDB-GENE-030131-4053]
94. lrrfip1b ENSDARG00000095170 293 0.842 - - - - - 0.842 - - - leucine rich repeat (in FLII) interacting protein 1b [Source:ZFIN;Acc:ZDB-GENE-050208-324]
95. zgc:174563 zgc:174563 198 0.842 - - - - - - 0.842 - -
96. CR855306.1 ENSDARG00000099475 102 0.842 - - - - - 0.842 - - -
97. AL929204.1 AL929204.1 773 0.841 - - - - - 0.841 - - -
98. zcchc10 ENSDARG00000091092 1333 0.841 - - - - - 0.841 - - - zinc finger, CCHC domain containing 10 [Source:ZFIN;Acc:ZDB-GENE-030131-6172]
99. gak ENSDARG00000090654 695 0.84 - - - - - 0.840 - - - cyclin G associated kinase [Source:ZFIN;Acc:ZDB-GENE-041210-358]
100. atg10 ENSDARG00000104846 85 0.84 - - - - - 0.840 - - - ATG10 autophagy related 10 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-051030-72]

There are 1138 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA