Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for ercc8

Gene Name Gene ID Reads Annotation
ercc8 ENSDARG00000069283, ENSDARG00000116263 546 excision repair cross-complementation group 8 [Source:ZFIN;Acc:ZDB-GENE-041010-60]










Genes with expression patterns similar to ercc8

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ercc8 ENSDARG00000069283, ENSDARG00000116263 546 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 excision repair cross-complementation group 8 [Source:ZFIN;Acc:ZDB-GENE-041010-60]
2. ubn2 ubn2 534 1.698 0.796 - - - - - 0.902 - -
3. paf1 ENSDARG00000098432 1806 1.677 - - - - - 0.787 0.890 - - PAF1 homolog, Paf1/RNA polymerase II complex component [Source:ZFIN;Acc:ZDB-GENE-050506-101]
4. samd13 ENSDARG00000062977 331 1.649 - 0.746 - - - - 0.903 - - sterile alpha motif domain containing 13 [Source:ZFIN;Acc:ZDB-GENE-060929-676]
5. polr3a ENSDARG00000102569 1072 1.615 - - - - - 0.794 0.821 - - polymerase (RNA) III (DNA directed) polypeptide A [Source:ZFIN;Acc:ZDB-GENE-050208-103]
6. coro2a ENSDARG00000005210 1479 1.614 - - - - - 0.748 0.866 - - coronin, actin binding protein, 2A [Source:ZFIN;Acc:ZDB-GENE-030131-2258]
7. dlc ENSDARG00000002336, ENSDARG00000116332 578 1.566 - - - - - 0.734 0.832 - - deltaC [Source:ZFIN;Acc:ZDB-GENE-000125-4]
8. stk16 ENSDARG00000037777 255 1.552 - 0.811 - - - - 0.741 - - serine/threonine kinase 16 [Source:ZFIN;Acc:ZDB-GENE-050417-102]
9. spsb3a ENSDARG00000077737 527 1.515 - 0.731 - - - - 0.784 - - splA/ryanodine receptor domain and SOCS box containing 3a [Source:ZFIN;Acc:ZDB-GENE-030131-4182]
10. ndc1 ENSDARG00000021120 2417 1.481 - - 0.746 - - - 0.735 - - NDC1 transmembrane nucleoporin [Source:ZFIN;Acc:ZDB-GENE-030131-7176]
11. pgls ENSDARG00000021233 264 1.479 - - - - - - 0.767 - 0.712 6-phosphogluconolactonase [Source:ZFIN;Acc:ZDB-GENE-040822-9]
12. stub1 ENSDARG00000045228 105 1.477 - - 0.718 - - 0.759 - - - STIP1 homology and U-Box containing protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2963]
13. sec23ip ENSDARG00000061413 804 1.476 - 0.702 - - - - 0.774 - - SEC23 interacting protein [Source:ZFIN;Acc:ZDB-GENE-030131-5259]
14. pigl ENSDARG00000067752, ENSDARG00000116105 282 1.465 0.712 - - - - 0.753 - - - phosphatidylinositol glycan anchor biosynthesis, class L [Source:ZFIN;Acc:ZDB-GENE-050506-60]
15. twf1b ENSDARG00000011661 630 1.453 - - - - - - 0.726 - 0.727 twinfilin actin-binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-040711-3]
16. commd4 ENSDARG00000061946 3281 1.452 - 0.732 - - - 0.720 - - - COMM domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-060929-600]
17. fam222bb ENSDARG00000078578 779 1.451 - - - - - 0.729 - - 0.722 family with sequence similarity 222, member Bb [Source:ZFIN;Acc:ZDB-GENE-110419-4]
18. eif2ak1 ENSDARG00000093182, ENSDARG00000112267 695 1.448 - 0.747 - - - - 0.701 - - eukaryotic translation initiation factor 2-alpha kinase 1 [Source:ZFIN;Acc:ZDB-GENE-061013-268]
19. SLC12A7 SLC12A7 1702 1.448 - 0.714 - - - - 0.734 - -
20. BRCC3 ENSDARG00000098242 1123 1.436 - - - - - - 0.715 - 0.721 BRCA1/BRCA2-containing complex, subunit 3 [Source:ZFIN;Acc:ZDB-GENE-100215-1]
21. mgat1b ENSDARG00000036065 996 1.436 0.724 - - - - - - - 0.712 mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase b [Source:ZFIN;Acc:ZDB-GENE-061103-589]
22. crfb8 crfb8 392 1.434 - 0.710 - - - 0.724 - - -
23. CLCC1 155 0.942 - - - - - - 0.942 - - chloride channel CLIC-like 1, transcript variant X2
24. tgm5l ENSDARG00000098837 174 0.936 - - - - - - 0.936 - - transglutaminase 5, like [Source:ZFIN;Acc:ZDB-GENE-110411-176]
25. mon1a ENSDARG00000078585 554 0.936 - - - - - - 0.936 - - MON1 secretory trafficking family member A [Source:ZFIN;Acc:ZDB-GENE-070615-6]
26. zgc:112496 ENSDARG00000004274 1258 0.935 - - - - - 0.935 - - - zgc:112496 [Source:ZFIN;Acc:ZDB-GENE-050320-25]
27. vps11 ENSDARG00000036338 421 0.932 - - - - - - 0.932 - - vacuolar protein sorting 11 [Source:ZFIN;Acc:ZDB-GENE-050731-5]
28. zgc:171971 ENSDARG00000042054 388 0.932 - - - - - - 0.932 - - zgc:171971 [Source:ZFIN;Acc:ZDB-GENE-070928-37]
29. tmem205 ENSDARG00000100677 101 0.929 - - - - - - 0.929 - - transmembrane protein 205 [Source:ZFIN;Acc:ZDB-GENE-070112-1692]
30. si:ch211-193k19.1 ENSDARG00000035660 636 0.921 - - - - - - 0.921 - - si:ch211-193k19.1 [Source:ZFIN;Acc:ZDB-GENE-060503-110]
31. scamp4 ENSDARG00000010531, ENSDARG00000114792 1143 0.915 - - - - - - 0.915 - - secretory carrier membrane protein 4 [Source:ZFIN;Acc:ZDB-GENE-050913-40]
32. ptpn23a ENSDARG00000070124 1206 0.912 - - - - - - 0.912 - - protein tyrosine phosphatase, non-receptor type 23, a [Source:ZFIN;Acc:ZDB-GENE-100921-24]
33. CU929119.2 CU929119.2 859 0.908 - - - - - - 0.908 - -
34. rmnd1 ENSDARG00000027465 116 0.907 - - - - - 0.907 - - - required for meiotic nuclear division 1 homolog [Source:ZFIN;Acc:ZDB-GENE-050522-21]
35. si:ch211-127i16.1 si:ch211-127i16.1 228 0.906 - - - - - - 0.906 - -
36. rad18 ENSDARG00000027938 574 0.902 - - - - - - 0.902 - - RAD18 E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-040426-745]
37. ENGASE ENSDARG00000010035 232 0.902 - - - - - - 0.902 - - endo-beta-N-acetylglucosaminidase [Source:ZFIN;Acc:ZDB-GENE-070112-1332]
38. mogs ENSDARG00000060252 1151 0.901 - - - - - - 0.901 - - mannosyl-oligosaccharide glucosidase [Source:ZFIN;Acc:ZDB-GENE-070112-412]
39. gnb1a ENSDARG00000090454 481 0.898 - - - - - - 0.898 - - guanine nucleotide binding protein (G protein), beta polypeptide 1a [Source:ZFIN;Acc:ZDB-GENE-030131-823]
40. pon3 pon3 1146 0.894 - - - - - - 0.894 - -
41. lamb1b ENSDARG00000045524, ENSDARG00000116025 613 0.894 - - - - - - 0.894 - - laminin, beta 1b [Source:ZFIN;Acc:ZDB-GENE-041210-197]
42. mfn2 ENSDARG00000079504 726 0.894 - - - - - - 0.894 - - mitofusin 2 [Source:ZFIN;Acc:ZDB-GENE-081105-44]
43. si:dkey-121j17.6 ENSDARG00000069661 456 0.893 - - - - - - 0.893 - - si:dkey-121j17.6 [Source:ZFIN;Acc:ZDB-GENE-121214-361]
44. LRRC8E LRRC8E 495 0.892 - - - - - - 0.892 - -
45. tgfbr2 tgfbr2 1117 0.892 - - - - - - 0.892 - -
46. mtx1a ENSDARG00000025500 275 0.891 - - - - - - 0.891 - - metaxin 1a [Source:ZFIN;Acc:ZDB-GENE-060606-2]
47. VAV2 ENSDARG00000044718, ENSDARG00000114652 422 0.891 - - - - - 0.891 - - - vav 2 guanine nucleotide exchange factor [Source:ZFIN;Acc:ZDB-GENE-091204-420]
48. si:dkey-11f4.14 ENSDARG00000098461 35 0.89 - - - - - - 0.890 - - si:dkey-11f4.14 [Source:ZFIN;Acc:ZDB-GENE-070912-355]
49. ggps1 ENSDARG00000023627 650 0.889 - - - - - - 0.889 - - geranylgeranyl diphosphate synthase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8742]
50. ddx51 ENSDARG00000025854 691 0.885 - - - - - - 0.885 - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 51 [Source:ZFIN;Acc:ZDB-GENE-040927-28]
51. ap5s1 ENSDARG00000076755 318 0.884 - - - - - - 0.884 - - adaptor related protein complex 5 subunit sigma 1 [Source:ZFIN;Acc:ZDB-GENE-090313-184]
52. guk1a ENSDARG00000030340 517 0.881 - - - - - - 0.881 - - guanylate kinase 1a [Source:ZFIN;Acc:ZDB-GENE-040625-130]
53. coa5 ENSDARG00000094833 1988 0.88 - - - - - - 0.880 - - cytochrome C oxidase assembly factor 5 [Source:ZFIN;Acc:ZDB-GENE-060825-53]
54. si:ch211-233a24.2 ENSDARG00000062330, ENSDARG00000110766, ENSDARG00000116929 622 0.876 - - - - - - 0.876 - - si:ch211-233a24.2 [Source:ZFIN;Acc:ZDB-GENE-090313-98]
55. samd10a ENSDARG00000079978, ENSDARG00000112138 430 0.875 - - - - - - 0.875 - - sterile alpha motif domain containing 10a [Source:ZFIN;Acc:ZDB-GENE-080204-53]
56. stil ENSDARG00000024904, ENSDARG00000114288, ENSDARG00000116436 324 0.873 0.873 - - - - - - - - scl/tal1 interrupting locus [Source:ZFIN;Acc:ZDB-GENE-020419-39]
57. iqsec2 iqsec2 304 0.872 - - - - - - 0.872 - -
58. SLC27A3 SLC27A3 240 0.868 - - - - - 0.868 - - -
59. mlec ENSDARG00000059630 2057 0.867 - - - - - - 0.867 - - malectin [Source:ZFIN;Acc:ZDB-GENE-081105-187]
60. egfl6 ENSDARG00000045958 335 0.867 - - - - - - 0.867 - - EGF-like-domain, multiple 6 [Source:ZFIN;Acc:ZDB-GENE-040718-157]
61. dhrs9 ENSDARG00000019260 250 0.865 - - - - - 0.865 - - - dehydrogenase/reductase (SDR family) member 9 [Source:ZFIN;Acc:ZDB-GENE-030131-1249]
62. C12H10orf2 C12H10orf2 245 0.863 - - - - - 0.863 - - -
63. kctd2 ENSDARG00000025875, ENSDARG00000114216 802 0.863 - - - - - - 0.863 - - potassium channel tetramerization domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060825-85]
64. xrcc1 ENSDARG00000009494 1346 0.862 - 0.862 - - - - - - - X-ray repair complementing defective repair in Chinese hamster cells 1 [Source:ZFIN;Acc:ZDB-GENE-040822-30]
65. mms22l ENSDARG00000074691 232 0.862 - 0.862 - - - - - - - MMS22-like, DNA repair protein [Source:ZFIN;Acc:ZDB-GENE-030131-3869]
66. tnfsf10l4 ENSDARG00000058068, ENSDARG00000111545 136 0.861 - - - - - 0.861 - - - tumor necrosis factor (ligand) superfamily, member 10 like 4 [Source:ZFIN;Acc:ZDB-GENE-050227-6]
67. tmem127 ENSDARG00000030981 1389 0.86 - - - - - - 0.860 - - transmembrane protein 127 [Source:ZFIN;Acc:ZDB-GENE-050522-97]
68. FOXK2 ENSDARG00000030583 5500 0.859 - - - - - - 0.859 - - forkhead box K2 [Source:ZFIN;Acc:ZDB-GENE-030131-2861]
69. ENSDARG00000089986 ENSDARG00000089986 308 0.859 - - - - - - 0.859 - -
70. scp2b ENSDARG00000102356 951 0.858 - - - - - 0.858 - - - sterol carrier protein 2b [Source:ZFIN;Acc:ZDB-GENE-041010-196]
71. ss18 ENSDARG00000002970 2618 0.858 - 0.858 - - - - - - - synovial sarcoma translocation, chromosome 18 (H. sapiens) [Source:ZFIN;Acc:ZDB-GENE-030131-4867]
72. ppm1aa ENSDARG00000032155 1039 0.858 - - - - - - 0.858 - - protein phosphatase, Mg2+/Mn2+ dependent, 1Aa [Source:ZFIN;Acc:ZDB-GENE-991102-15]
73. lztfl1 ENSDARG00000105010 1697 0.858 - - - - - 0.858 - - - leucine zipper transcription factor-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-945]
74. si:ch211-136a13.1 ENSDARG00000060927 250 0.857 - - - - - 0.857 - - - si:ch211-136a13.1 [Source:ZFIN;Acc:ZDB-GENE-050419-214]
75. tmem192 ENSDARG00000037484, ENSDARG00000116740 269 0.857 - - - - - - 0.857 - - transmembrane protein 192 [Source:ZFIN;Acc:ZDB-GENE-040426-2254]
76. bmp2a ENSDARG00000013409 303 0.856 - - 0.856 - - - - - - bone morphogenetic protein 2a [Source:ZFIN;Acc:ZDB-GENE-980526-388]
77. C12H10orf118 C12H10orf118 964 0.856 - - - - - - 0.856 - -
78. FP102192.1 ENSDARG00000101104 32 0.856 - - - - - 0.856 - - - protein FAM111A-like [Source:NCBI gene;Acc:101886648]
79. TMEM30B ENSDARG00000054122 1519 0.855 - - - - - - 0.855 - - transmembrane protein 30B [Source:ZFIN;Acc:ZDB-GENE-040704-17]
80. nhp2l1a nhp2l1a 993 0.853 - - - - - 0.853 - - -
81. stk38a ENSDARG00000019973 1343 0.85 - - - - - - 0.850 - - serine/threonine kinase 38a [Source:ZFIN;Acc:ZDB-GENE-040426-2811]
82. ube2g1b ENSDARG00000069527 5376 0.85 - - - - - - 0.850 - - ubiquitin-conjugating enzyme E2G 1b (UBC7 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-2939]
83. mybl1 ENSDARG00000030999 158 0.85 - - - - - 0.850 - - - v-myb avian myeloblastosis viral oncogene homolog-like 1 [Source:ZFIN;Acc:ZDB-GENE-041111-281]
84. GALNT3 ENSDARG00000108649 356 0.849 - - - - - - 0.849 - - polypeptide N-acetylgalactosaminyltransferase 3 [Source:HGNC Symbol;Acc:HGNC:4125]
85. tnip1 ENSDARG00000015653 94 0.848 - - - - - 0.848 - - - TNFAIP3 interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-070112-1502]
86. hnf4g ENSDARG00000071565 117 0.847 - - - - - 0.847 - - - hepatocyte nuclear factor 4, gamma [Source:ZFIN;Acc:ZDB-GENE-060929-100]
87. si:ch211-286b5.5 ENSDARG00000096661 3136 0.847 - - - - - - 0.847 - - si:ch211-286b5.5 [Source:ZFIN;Acc:ZDB-GENE-121214-209]
88. map3k3 ENSDARG00000060348 1482 0.841 - - - - - 0.841 - - - mitogen-activated protein kinase kinase kinase 3 [Source:ZFIN;Acc:ZDB-GENE-070910-1]
89. tefb ENSDARG00000098103 370 0.84 - - - - - - 0.840 - - thyrotrophic embryonic factor b [Source:ZFIN;Acc:ZDB-GENE-050522-224]
90. LMCD1 ENSDARG00000002002 298 0.839 - - - - - - 0.839 - - LIM and cysteine-rich domains 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1067]
91. vps8 ENSDARG00000060477, ENSDARG00000113757 271 0.838 - - - - - 0.838 - - - vacuolar protein sorting 8 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-060503-348]
92. abhd3 ENSDARG00000018809 168 0.838 - - - - - 0.838 - - - abhydrolase domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040912-90]
93. pqbp1 ENSDARG00000029724 1472 0.837 - - - - - 0.837 - - - polyglutamine binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030616-158]
94. atp11a ENSDARG00000008413 742 0.836 - - - - - 0.836 - - - ATPase phospholipid transporting 11A [Source:ZFIN;Acc:ZDB-GENE-090311-52]
95. GGT7 ENSDARG00000115805 481 0.835 - - - - - - 0.835 - - gamma-glutamyltransferase 7 [Source:HGNC Symbol;Acc:HGNC:4259]
96. ptcd1 ENSDARG00000076176 281 0.835 - 0.835 - - - - - - - pentatricopeptide repeat domain 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6146]
97. PHLDB2_1 PHLDB2_1 316 0.834 - - - - - 0.834 - - -
98. MDFIC ENSDARG00000074223 781 0.834 - - - - - - 0.834 - - MyoD family inhibitor domain containing [Source:HGNC Symbol;Acc:HGNC:28870]
99. get4 ENSDARG00000024398 1818 0.834 - - - - - 0.834 - - - golgi to ER traffic protein 4 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-5399]
100. TRAF3IP2 TRAF3IP2 153 0.834 0.834 - - - - - - - -

There are 959 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA