Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for ercc6

Gene Name Gene ID Reads Annotation
ercc6 ENSDARG00000075612 1175 excision repair cross-complementation group 6 [Source:ZFIN;Acc:ZDB-GENE-070228-1]










Genes with expression patterns similar to ercc6

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ercc6 ENSDARG00000075612 1175 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 excision repair cross-complementation group 6 [Source:ZFIN;Acc:ZDB-GENE-070228-1]
2. dvl3a ENSDARG00000015707 1132 2.399 - 0.704 - - 0.990 - 0.705 - - dishevelled segment polarity protein 3a [Source:ZFIN;Acc:ZDB-GENE-010319-1]
3. ildr1b ENSDARG00000040910 169 2.226 0.718 - - - - 0.737 0.771 - - immunoglobulin-like domain containing receptor 1b [Source:ZFIN;Acc:ZDB-GENE-040912-72]
4. UNKL ENSDARG00000037838 1086 1.869 - - - - 0.969 - - 0.900 - unkempt family zinc finger-like [Source:ZFIN;Acc:ZDB-GENE-131120-196]
5. cuedc2 ENSDARG00000039365 484 1.785 - - - - 0.997 0.788 - - - CUE domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6283]
6. ctslb_1 ENSDARG00000039173, ENSDARG00000074306 486 1.781 0.804 - - - 0.977 - - - - cathepsin Lb [Source:ZFIN;Acc:ZDB-GENE-980526-285]
7. C24H17orf96 C24H17orf96 1538 1.775 - - - - 0.966 - - 0.809 -
8. usp16 ENSDARG00000060633 684 1.757 - 0.765 - - 0.992 - - - - ubiquitin specific peptidase 16 [Source:ZFIN;Acc:ZDB-GENE-030131-4153]
9. tbc1d10a tbc1d10a 462 1.75 - - - 0.837 - - - 0.913 -
10. zgc:77158 ENSDARG00000013784 634 1.73 - - - - - 0.888 - 0.842 - zgc:77158 [Source:ZFIN;Acc:ZDB-GENE-040426-1799]
11. TRIM65 ENSDARG00000077098 991 1.72 - 0.856 - - - - - 0.864 - tripartite motif containing 65 [Source:ZFIN;Acc:ZDB-GENE-130613-1]
12. ctdspl2b ENSDARG00000060586 1682 1.703 - - - - 0.980 - 0.723 - - CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2b [Source:ZFIN;Acc:ZDB-GENE-030131-1809]
13. nudt2 ENSDARG00000058728 371 1.7 - - - 0.810 - - - 0.890 - nudix (nucleoside diphosphate linked moiety X)-type motif 2 [Source:ZFIN;Acc:ZDB-GENE-040718-7]
14. zgc:194679 ENSDARG00000073723 1396 1.7 - - - - 0.979 0.721 - - - zgc:194679 [Source:ZFIN;Acc:ZDB-GENE-030131-2847]
15. ttyh2 ENSDARG00000016934 1868 1.698 - 0.783 - - 0.915 - - - - tweety family member 2 [Source:ZFIN;Acc:ZDB-GENE-040718-193]
16. comtb ENSDARG00000025679, ENSDARG00000111678 1692 1.69 - - - - 0.990 - 0.700 - - catechol-O-methyltransferase b [Source:ZFIN;Acc:ZDB-GENE-040724-164]
17. msi1 ENSDARG00000010710 2634 1.68 - - - - 0.890 - - 0.790 - musashi RNA-binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050320-86]
18. hmcn2 ENSDARG00000079327, ENSDARG00000086060 1075 1.671 - - - 0.835 - - - 0.836 - hemicentin 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9765]
19. PRRT3 PRRT3 195 1.67 - 0.835 - - - - - 0.835 -
20. camk1da ENSDARG00000074905, ENSDARG00000111604 479 1.661 - - - 0.737 - - - 0.924 - calcium/calmodulin-dependent protein kinase 1Da [Source:ZFIN;Acc:ZDB-GENE-080402-7]
21. si:dkey-6n6.2 ENSDARG00000058032 1186 1.66 - 0.761 - - - - - 0.899 - si:dkey-6n6.2 [Source:ZFIN;Acc:ZDB-GENE-060503-173]
22. F8A3 F8A3 646 1.649 - - - 0.762 - - - 0.887 -
23. fam98a ENSDARG00000078391, ENSDARG00000109752, ENSDARG00000110498 997 1.641 - 0.760 - - - - - 0.881 - family with sequence similarity 98, member A [Source:ZFIN;Acc:ZDB-GENE-091202-6]
24. itgb5 ENSDARG00000012942, ENSDARG00000114990 406 1.635 - 0.767 - 0.868 - - - - - integrin, beta 5 [Source:ZFIN;Acc:ZDB-GENE-030131-6022]
25. asb1 ENSDARG00000026635 166 1.633 - 0.833 - - - - - 0.800 - ankyrin repeat and SOCS box containing 1 [Source:ZFIN;Acc:ZDB-GENE-040718-234]
26. SLC35A3 SLC35A3 832 1.633 - - - - - 0.839 - 0.794 -
27. ILKAP ENSDARG00000040615 817 1.621 0.809 - - 0.812 - - - - - integrin-linked kinase-associated serine/threonine phosphatase [Source:ZFIN;Acc:ZDB-GENE-070410-122]
28. fmnl2a ENSDARG00000012586 136 1.615 0.813 0.802 - - - - - - - formin-like 2a [Source:ZFIN;Acc:ZDB-GENE-081105-70]
29. pfkfb4l pfkfb4l 2539 1.613 - - - - - 0.879 - 0.734 -
30. ensaa ENSDARG00000036944 685 1.612 - - - 0.784 - - - 0.828 - endosulfine alpha a [Source:ZFIN;Acc:ZDB-GENE-060503-181]
31. ptbp2a ENSDARG00000101947 1921 1.612 - - - - - - 0.848 0.764 - polypyrimidine tract binding protein 2a [Source:ZFIN;Acc:ZDB-GENE-050320-141]
32. fancc ENSDARG00000055232, ENSDARG00000116499 50 1.611 0.788 - - - - 0.823 - - - FA complementation group C [Source:ZFIN;Acc:ZDB-GENE-060510-2]
33. BX649494.1 BX649494.1 195 1.602 0.810 0.792 - - - - - - -
34. ROBO3_1 ROBO3_1 468 1.601 - - - 0.701 - - - 0.900 -
35. SLC25A6 ENSDARG00000005853, ENSDARG00000113366 975 1.591 - - - - - 0.707 - 0.884 - solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6 [Source:ZFIN;Acc:ZDB-GENE-070912-446]
36. tnfaip3 ENSDARG00000027777 1066 1.579 - 0.732 - 0.847 - - - - - tumor necrosis factor, alpha-induced protein 3 [Source:ZFIN;Acc:ZDB-GENE-100212-2]
37. CYTH3 CYTH3 589 1.578 - - - - - - 0.716 0.862 -
38. snx22 ENSDARG00000053204 148 1.573 - 0.705 - - - - 0.868 - - sorting nexin 22 [Source:ZFIN;Acc:ZDB-GENE-060825-154]
39. pid1 ENSDARG00000098984, ENSDARG00000114639 1252 1.569 - - - - - 0.709 0.860 - - phosphotyrosine interaction domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050320-72]
40. pcmtl ENSDARG00000042848, ENSDARG00000110149 301 1.564 - 0.778 - 0.786 - - - - - l-isoaspartyl protein carboxyl methyltransferase, like [Source:ZFIN;Acc:ZDB-GENE-040426-1738]
41. STARD5 ENSDARG00000076117 251 1.558 - 0.830 - 0.728 - - - - - StAR-related lipid transfer (START) domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-130103-4]
42. si:dkey-266m15.6 ENSDARG00000078508 490 1.557 0.779 - - - - 0.778 - - - si:dkey-266m15.6 [Source:ZFIN;Acc:ZDB-GENE-070705-443]
43. znf668 ENSDARG00000025226, ENSDARG00000112533 177 1.553 0.776 0.777 - - - - - - - zinc finger protein 668 [Source:ZFIN;Acc:ZDB-GENE-041001-46]
44. pho ENSDARG00000035133 670 1.543 - 0.774 - 0.769 - - - - - phoenix [Source:ZFIN;Acc:ZDB-GENE-030131-5935]
45. ndrg3b ENSDARG00000010052, ENSDARG00000109420 3951 1.543 - - - - - - - 0.833 0.710 ndrg family member 3b [Source:ZFIN;Acc:ZDB-GENE-030131-5606]
46. sec14l1 ENSDARG00000098821, ENSDARG00000103991 1004 1.541 - - - - - - 0.705 0.836 - SEC14-like lipid binding 1 [Source:ZFIN;Acc:ZDB-GENE-040426-801]
47. jag1b ENSDARG00000013168 1002 1.538 - - - - - 0.800 - 0.738 - jagged 1b [Source:ZFIN;Acc:ZDB-GENE-011128-4]
48. si:ch211-191i18.2 ENSDARG00000070141 1164 1.538 - 0.786 - 0.752 - - - - - si:ch211-191i18.2 [Source:ZFIN;Acc:ZDB-GENE-060503-769]
49. otud3 ENSDARG00000022648 263 1.53 - 0.780 - 0.750 - - - - - OTU deubiquitinase 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2509]
50. smarcal1 ENSDARG00000102265 1921 1.528 0.732 - - 0.796 - - - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a-like 1 [Source:ZFIN;Acc:ZDB-GENE-041210-303]
51. ptprnb ENSDARG00000077047 2743 1.524 - - 0.714 - - - - 0.810 - protein tyrosine phosphatase, receptor type, Nb [Source:ZFIN;Acc:ZDB-GENE-100505-1]
52. slco3a1 ENSDARG00000018726 590 1.523 0.779 0.744 - - - - - - - solute carrier organic anion transporter family, member 3A1 [Source:ZFIN;Acc:ZDB-GENE-030131-8662]
53. tctex1d1 ENSDARG00000103545 409 1.522 - 0.760 - 0.762 - - - - - Tctex1 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040912-49]
54. HECTD4 ENSDARG00000101079 952 1.519 0.717 - - - - - - 0.802 - HECT domain E3 ubiquitin protein ligase 4 [Source:HGNC Symbol;Acc:HGNC:26611]
55. rad21a ENSDARG00000006092 393 1.516 - 0.810 - 0.706 - - - - - RAD21 cohesin complex component a [Source:ZFIN;Acc:ZDB-GENE-030131-994]
56. KCNK3 KCNK3 115 1.513 - 0.785 - 0.728 - - - - -
57. cers1 ENSDARG00000063412 590 1.512 - 0.790 - - - 0.722 - - - ceramide synthase 1 [Source:ZFIN;Acc:ZDB-GENE-050208-406]
58. PPP1R1B ENSDARG00000076280 352 1.511 - - - 0.737 - 0.774 - - - protein phosphatase 1, regulatory (inhibitor) subunit 1B [Source:ZFIN;Acc:ZDB-GENE-120126-1]
59. smtnl ENSDARG00000055632, ENSDARG00000109489 788 1.505 - - - 0.795 - 0.710 - - - smoothelin, like [Source:ZFIN;Acc:ZDB-GENE-040212-1]
60. ncaph ENSDARG00000061468, ENSDARG00000113773 1401 1.502 - - - - - - 0.770 - 0.732 non-SMC condensin I complex, subunit H [Source:ZFIN;Acc:ZDB-GENE-070112-652]
61. pold3 ENSDARG00000076169 694 1.496 - - - 0.792 - - - - 0.704 polymerase (DNA-directed), delta 3, accessory subunit [Source:ZFIN;Acc:ZDB-GENE-060512-59]
62. ctsc ENSDARG00000101334 3691 1.491 - - - - 0.780 - - 0.711 - cathepsin C [Source:ZFIN;Acc:ZDB-GENE-030619-9]
63. apaf1 ENSDARG00000021239 1185 1.484 - - - - - 0.703 - 0.781 - apoptotic peptidase activating factor 1 [Source:ZFIN;Acc:ZDB-GENE-000616-4]
64. TUBB8P7 TUBB8P7 1353 1.479 - - - 0.762 - - - 0.717 -
65. trps1 ENSDARG00000104082 918 1.474 - 0.727 - 0.747 - - - - - trichorhinophalangeal syndrome I [Source:ZFIN;Acc:ZDB-GENE-030131-8404]
66. si:ch211-241j12.3 ENSDARG00000043963 128 1.472 - 0.728 - - - - 0.744 - - si:ch211-241j12.3 [Source:ZFIN;Acc:ZDB-GENE-040724-72]
67. mapk8ip3 ENSDARG00000062531 631 1.467 - - - 0.740 - 0.727 - - - mitogen-activated protein kinase 8 interacting protein 3 [Source:ZFIN;Acc:ZDB-GENE-090303-6]
68. dlx6a ENSDARG00000042291 185 1.466 0.725 - - - - 0.741 - - - distal-less homeobox 6a [Source:ZFIN;Acc:ZDB-GENE-980526-448]
69. tmem177 ENSDARG00000069301, ENSDARG00000113926 601 1.431 - 0.718 - 0.713 - - - - - transmembrane protein 177 [Source:ZFIN;Acc:ZDB-GENE-030131-993]
70. FKBP15_1 FKBP15_1 422 1.422 0.715 - - 0.707 - - - - -
71. azin1a ENSDARG00000052789 387 1.41 - - - 0.709 - - - 0.701 - antizyme inhibitor 1a [Source:ZFIN;Acc:ZDB-GENE-050417-20]
72. lrch2 ENSDARG00000075580, ENSDARG00000116418 255 0.999 - - - - 0.999 - - - - leucine-rich repeats and calponin homology (CH) domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-080114-1]
73. pfkpb ENSDARG00000012801 223 0.999 - - - - 0.999 - - - - phosphofructokinase, platelet b [Source:ZFIN;Acc:ZDB-GENE-070912-634]
74. ccr10 ENSDARG00000040643 255 0.998 - - - - 0.998 - - - - chemokine (C-C motif) receptor 10 [Source:ZFIN;Acc:ZDB-GENE-040718-424]
75. dopey1 438 0.998 - - - - 0.998 - - - - dopey family member 1, transcript variant X4
76. fam193b ENSDARG00000102831 442 0.998 - - - - 0.998 - - - - family with sequence similarity 193, member B [Source:ZFIN;Acc:ZDB-GENE-111102-1]
77. gorab ENSDARG00000042031 483 0.998 - - - - 0.998 - - - - golgin, rab6-interacting [Source:ZFIN;Acc:ZDB-GENE-040426-1384]
78. FOXL2 239 0.998 - - - - 0.998 - - - - forkhead box L2, transcript variant X1
79. lig4 ENSDARG00000060620 369 0.998 - - - - 0.998 - - - - ligase IV, DNA, ATP-dependent [Source:ZFIN;Acc:ZDB-GENE-070820-10]
80. nefma ENSDARG00000021351 790 0.998 - - - - 0.998 - - - - neurofilament, medium polypeptide a [Source:ZFIN;Acc:ZDB-GENE-050522-205]
81. med13b ENSDARG00000003910 1143 0.998 - - - - 0.998 - - - - mediator complex subunit 13b [Source:ZFIN;Acc:ZDB-GENE-030131-3529]
82. myl2b ENSDARG00000053424 226 0.998 - - - - 0.998 - - - - myosin, light chain 2b, regulatory, cardiac, slow [Source:ZFIN;Acc:ZDB-GENE-060331-137]
83. ccdc28b ENSDARG00000011222 528 0.997 - - - - 0.997 - - - - coiled-coil domain containing 28B [Source:ZFIN;Acc:ZDB-GENE-060208-3]
84. slc2a15b ENSDARG00000053269 899 0.997 - - - - 0.997 - - - - solute carrier family 2 (facilitated glucose transporter), member 15b [Source:ZFIN;Acc:ZDB-GENE-050508-1]
85. atxn7l3 ENSDARG00000029331 531 0.997 - - - - 0.997 - - - - ataxin 7-like 3 [Source:ZFIN;Acc:ZDB-GENE-030616-253]
86. ago4 ENSDARG00000100854 496 0.997 - - - - 0.997 - - - - argonaute RISC catalytic component 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5357]
87. TUSC5_1 TUSC5_1 320 0.997 - - - - 0.997 - - - -
88. pvalb6 ENSDARG00000009311, ENSDARG00000113947 248 0.997 - - - - 0.997 - - - - parvalbumin 6 [Source:ZFIN;Acc:ZDB-GENE-040912-95]
89. lgi1a ENSDARG00000020493 1218 0.997 - - - - 0.997 - - - - leucine-rich, glioma inactivated 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1731]
90. spag7 ENSDARG00000011555 3224 0.997 - - - - 0.997 - - - - sperm associated antigen 7 [Source:ZFIN;Acc:ZDB-GENE-040426-1632]
91. BX005008.2 BX005008.2 708 0.996 - - - - 0.996 - - - -
92. pip5k1bb ENSDARG00000006508 2812 0.996 - - - - 0.996 - - - - phosphatidylinositol-4-phosphate 5-kinase, type I, beta b [Source:ZFIN;Acc:ZDB-GENE-040912-141]
93. toporsb ENSDARG00000105028 1898 0.996 - - - - 0.996 - - - - topoisomerase I binding, arginine/serine-rich b [Source:ZFIN;Acc:ZDB-GENE-110728-3]
94. larp7 ENSDARG00000017315 1194 0.996 - - - - 0.996 - - - - La ribonucleoprotein domain family, member 7 [Source:ZFIN;Acc:ZDB-GENE-030131-6896]
95. CR759921.2 CR759921.2 583 0.996 - - - - 0.996 - - - -
96. fut8 fut8 652 0.995 - - - - 0.995 - - - -
97. tmem88a ENSDARG00000056920 536 0.995 - - - - 0.995 - - - - transmembrane protein 88 a [Source:ZFIN;Acc:ZDB-GENE-040426-1808]
98. bloc1s3 ENSDARG00000068828 502 0.995 - - - - 0.995 - - - - biogenesis of lysosomal organelles complex-1, subunit 3 [Source:ZFIN;Acc:ZDB-GENE-050913-10]
99. clu ENSDARG00000010434 498 0.995 - - - - 0.995 - - - - clusterin [Source:ZFIN;Acc:ZDB-GENE-040426-1774]
100. tab1 ENSDARG00000036613 445 0.995 - - - - 0.995 - - - - TGF-beta activated kinase 1/MAP3K7 binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-060628-1]

There are 1787 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA