Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for ercc4

Gene Name Gene ID Reads Annotation
ercc4 ENSDARG00000014161 2167 excision repair cross-complementation group 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5533]










Genes with expression patterns similar to ercc4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ercc4 ENSDARG00000014161 2167 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 excision repair cross-complementation group 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5533]
2. ITFG3 ITFG3 1803 1.956 0.971 - 0.985 - - - - - -
3. psmc2 ENSDARG00000020101 8095 1.893 0.921 - 0.972 - - - - - - proteasome 26S subunit, ATPase 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1327]
4. abracl ENSDARG00000042876 10208 1.892 0.912 - 0.980 - - - - - - ABRA C-terminal like [Source:ZFIN;Acc:ZDB-GENE-030131-8594]
5. amfr 774 1.827 0.979 0.848 - - - - - - - autocrine motility factor receptor, E3 ubiquitin protein ligase a, transcript variant X1
6. cant1a ENSDARG00000012192 1324 1.802 0.990 0.812 - - - - - - - calcium activated nucleotidase 1a [Source:ZFIN;Acc:ZDB-GENE-040426-2441]
7. btbd2 btbd2 1296 1.793 - 0.807 0.986 - - - - - -
8. tmed1b ENSDARG00000017255 2238 1.79 0.984 0.806 - - - - - - - transmembrane p24 trafficking protein 1b [Source:ZFIN;Acc:ZDB-GENE-070112-1112]
9. BX511021.1 ENSDARG00000073936 647 1.786 0.992 - - - - - - 0.794 - ferritin, middle subunit-like [Source:NCBI gene;Acc:100006428]
10. calr ENSDARG00000076290 13987 1.769 0.876 - 0.893 - - - - - - calreticulin [Source:ZFIN;Acc:ZDB-GENE-030131-4042]
11. prkag3b ENSDARG00000000369 1945 1.767 - - 0.986 - - - - 0.781 - protein kinase, AMP-activated, gamma 3b non-catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-060421-6938]
12. xrcc6bp1 662 1.734 - 0.961 - - - - - 0.773 - XRCC6 binding protein 1
13. chd2 ENSDARG00000060687 3832 1.722 0.968 0.754 - - - - - - - chromodomain helicase DNA binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-050419-256]
14. nsrp1 ENSDARG00000015221 1598 1.72 - 0.887 - - - 0.833 - - - nuclear speckle splicing regulatory protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2646]
15. cpped1 ENSDARG00000031968, ENSDARG00000112438 693 1.719 0.997 0.722 - - - - - - - calcineurin-like phosphoesterase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041114-118]
16. sqrdl 1598 1.719 0.971 0.748 - - - - - - - sulfide quinone reductase-like (yeast), transcript variant X2
17. CR559945.3 CR559945.3 1029 1.717 0.974 - - - - - - 0.743 -
18. dcp1b ENSDARG00000045484 534 1.706 0.998 0.708 - - - - - - - decapping mRNA 1B [Source:ZFIN;Acc:ZDB-GENE-040819-1]
19. zgc:162948 ENSDARG00000053695 301 1.665 - 0.879 - - - - - 0.786 - zgc:162948 [Source:ZFIN;Acc:ZDB-GENE-070424-46]
20. srsf2a ENSDARG00000057484 25721 1.659 0.704 - 0.955 - - - - - - serine/arginine-rich splicing factor 2a [Source:ZFIN;Acc:ZDB-GENE-040426-2706]
21. ctps1a ENSDARG00000030700 3868 1.648 0.888 - - - - - - 0.760 - CTP synthase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-808]
22. si:ch1073-392o20.2 ENSDARG00000102599 4172 1.627 0.847 0.780 - - - - - - - si:ch1073-392o20.2 [Source:ZFIN;Acc:ZDB-GENE-091204-431]
23. arl6ip5b ENSDARG00000016238 1622 1.574 - 0.820 - - - 0.754 - - - ADP-ribosylation factor-like 6 interacting protein 5b [Source:ZFIN;Acc:ZDB-GENE-040718-223]
24. syne1a ENSDARG00000009499, ENSDARG00000116204 601 1.547 - 0.793 - - - - - 0.754 - spectrin repeat containing, nuclear envelope 1a [Source:ZFIN;Acc:ZDB-GENE-030131-4172]
25. ddx39b ENSDARG00000036069 1151 1.544 - - - - - - 0.762 0.782 - DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B [Source:ZFIN;Acc:ZDB-GENE-040426-1259]
26. akt2 ENSDARG00000011219 647 1.535 - 0.715 - - - - - 0.820 - v-akt murine thymoma viral oncogene homolog 2 [Source:ZFIN;Acc:ZDB-GENE-031007-5]
27. ppp1r11 ENSDARG00000036063 587 1.49 - 0.773 - - - - - 0.717 - protein phosphatase 1, regulatory (inhibitor) subunit 11 [Source:ZFIN;Acc:ZDB-GENE-050417-99]
28. PCSK6 ENSDARG00000104574 710 1.483 - 0.726 - - - - - 0.757 - proprotein convertase subtilisin/kexin type 6 [Source:ZFIN;Acc:ZDB-GENE-100908-1]
29. txnl1 ENSDARG00000011921 692 1.471 - 0.718 - - - - - 0.753 - thioredoxin-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-701]
30. cyp2aa8 ENSDARG00000104540 2947 1.462 0.749 0.713 - - - - - - - cytochrome P450, family 2, subfamily AA, polypeptide 8 [Source:ZFIN;Acc:ZDB-GENE-041010-183]
31. mta3 ENSDARG00000054903, ENSDARG00000113436 353 0.999 0.999 - - - - - - - - metastasis associated 1 family, member 3 [Source:ZFIN;Acc:ZDB-GENE-030131-6485]
32. daam2 ENSDARG00000028393 226 0.999 0.999 - - - - - - - - dishevelled associated activator of morphogenesis 2 [Source:ZFIN;Acc:ZDB-GENE-070709-1]
33. SUSD4 ENSDARG00000026335 195 0.999 0.999 - - - - - - - - sushi domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-110511-1]
34. gapvd1 ENSDARG00000090183, ENSDARG00000113177 611 0.999 0.999 - - - - - - - - GTPase activating protein and VPS9 domains 1 [Source:ZFIN;Acc:ZDB-GENE-040718-117]
35. sh3gl3b ENSDARG00000007302 573 0.998 0.998 - - - - - - - - SH3-domain GRB2-like 3b [Source:ZFIN;Acc:ZDB-GENE-040121-4]
36. RNF214 RNF214 816 0.998 0.998 - - - - - - - -
37. atg4b ENSDARG00000052104 758 0.998 0.998 - - - - - - - - autophagy related 4B, cysteine peptidase [Source:ZFIN;Acc:ZDB-GENE-040917-3]
38. bbs5 ENSDARG00000039827 211 0.998 0.998 - - - - - - - - Bardet-Biedl syndrome 5 [Source:ZFIN;Acc:ZDB-GENE-040426-1083]
39. lyz ENSDARG00000057789, ENSDARG00000109290, ENSDARG00000114098 5991 0.998 0.998 - - - - - - - - lysozyme [Source:ZFIN;Acc:ZDB-GENE-020515-2]
40. tctex1d1 ENSDARG00000103545 409 0.998 0.998 - - - - - - - - Tctex1 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040912-49]
41. slc22a2 ENSDARG00000030530 313 0.998 0.998 - - - - - - - - solute carrier family 22 (organic cation transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2167]
42. rnf168 ENSDARG00000112483 594 0.998 0.998 - - - - - - - - ring finger protein 168 [Source:ZFIN;Acc:ZDB-GENE-030131-6013]
43. tmem194a tmem194a 745 0.998 0.998 - - - - - - - -
44. chst14 ENSDARG00000043011 345 0.998 0.998 - - - - - - - - carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14 [Source:ZFIN;Acc:ZDB-GENE-040401-3]
45. zyx ENSDARG00000075733 429 0.998 0.998 - - - - - - - - zyxin [Source:ZFIN;Acc:ZDB-GENE-070928-18]
46. dhcr7 ENSDARG00000103226 673 0.998 0.998 - - - - - - - - 7-dehydrocholesterol reductase [Source:ZFIN;Acc:ZDB-GENE-030912-9]
47. phf12a ENSDARG00000074303 1025 0.997 0.997 - - - - - - - - PHD finger protein 12a [Source:ZFIN;Acc:ZDB-GENE-030131-3876]
48. BX682552.2 BX682552.2 1427 0.997 0.997 - - - - - - - -
49. si:ch73-367f21.4 ENSDARG00000071097 862 0.997 0.997 - - - - - - - - si:ch73-367f21.4 [Source:ZFIN;Acc:ZDB-GENE-120214-27]
50. bfsp2 ENSDARG00000011998 295 0.997 0.997 - - - - - - - - beaded filament structural protein 2, phakinin [Source:ZFIN;Acc:ZDB-GENE-041212-58]
51. nr2f1b ENSDARG00000017168 1487 0.997 0.997 - - - - - - - - nuclear receptor subfamily 2, group F, member 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1438]
52. fbxo45 ENSDARG00000071492, ENSDARG00000111553 732 0.997 0.997 - - - - - - - - F-box protein 45 [Source:ZFIN;Acc:ZDB-GENE-040426-1450]
53. cep170a cep170a 652 0.997 0.997 - - - - - - - -
54. ino80db ENSDARG00000062226 504 0.997 0.997 - - - - - - - - INO80 complex subunit Db [Source:ZFIN;Acc:ZDB-GENE-070112-2072]
55. dnajc11 1939 0.997 0.997 - - - - - - - - DnaJ heat shock protein family (Hsp40) member C11
56. apip ENSDARG00000003132 1212 0.997 0.997 - - - - - - - - APAF1 interacting protein [Source:ZFIN;Acc:ZDB-GENE-040912-128]
57. whsc1 1701 0.997 0.997 - - - - - - - - Wolf-Hirschhorn syndrome candidate 1
58. mocs2 ENSDARG00000077202, ENSDARG00000114592, ENSDARG00000114882 942 0.997 0.997 - - - - - - - - molybdenum cofactor synthesis 2 [Source:ZFIN;Acc:ZDB-GENE-110411-53]
59. tmem106bb ENSDARG00000035949, ENSDARG00000113700 1415 0.996 0.996 - - - - - - - - transmembrane protein 106Bb [Source:ZFIN;Acc:ZDB-GENE-050913-37]
60. ghitm 1443 0.996 0.996 - - - - - - - - growth hormone inducible transmembrane protein
61. scinla ENSDARG00000102415, ENSDARG00000117110 1996 0.996 0.996 - - - - - - - - scinderin like a [Source:ZFIN;Acc:ZDB-GENE-030131-2005]
62. esrp2 ENSDARG00000018814, ENSDARG00000115061 1198 0.996 0.996 - - - - - - - - epithelial splicing regulatory protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9824]
63. itm2ca ENSDARG00000043448 1265 0.996 0.996 - - - - - - - - integral membrane protein 2Ca [Source:ZFIN;Acc:ZDB-GENE-040718-284]
64. ryr1a ENSDARG00000011422 2377 0.996 0.996 - - - - - - - - ryanodine receptor 1a (skeletal) [Source:ZFIN;Acc:ZDB-GENE-020108-2]
65. sema4e ENSDARG00000052997 607 0.996 0.996 - - - - - - - - semaphorin 4e [Source:ZFIN;Acc:ZDB-GENE-990715-7]
66. HDAC5 ENSDARG00000075139 1287 0.996 0.996 - - - - - - - - histone deacetylase 5 [Source:ZFIN;Acc:ZDB-GENE-121219-3]
67. pfkfb4l pfkfb4l 2539 0.996 0.996 - - - - - - - -
68. myo6a ENSDARG00000044016 847 0.996 0.996 - - - - - - - - myosin VIa [Source:ZFIN;Acc:ZDB-GENE-040819-2]
69. cylda ENSDARG00000060058 768 0.996 0.996 - - - - - - - - cylindromatosis (turban tumor syndrome), a [Source:ZFIN;Acc:ZDB-GENE-061108-2]
70. slc25a5 ENSDARG00000092553 626 0.996 0.996 - - - - - - - - solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 5 [Source:ZFIN;Acc:ZDB-GENE-020419-9]
71. gbx1 ENSDARG00000071418 871 0.996 0.996 - - - - - - - - gastrulation brain homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-020117-2]
72. eef2a.1 ENSDARG00000042094 1781 0.995 0.995 - - - - - - - - eukaryotic translation elongation factor 2a, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050522-500]
73. crbn ENSDARG00000054250 673 0.995 0.995 - - - - - - - - cereblon [Source:ZFIN;Acc:ZDB-GENE-040822-43]
74. ELMSAN1_1 ELMSAN1_1 1337 0.995 0.995 - - - - - - - -
75. mnx1 ENSDARG00000035984, ENSDARG00000109419 1014 0.995 0.995 - - - - - - - - motor neuron and pancreas homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040409-1]
76. AL935029.1 AL935029.1 514 0.995 0.995 - - - - - - - -
77. wbscr16 wbscr16 791 0.995 0.995 - - - - - - - -
78. gtpbp4 ENSDARG00000018961 5323 0.994 0.994 - - - - - - - - GTP binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5982]
79. hars ENSDARG00000003693 7217 0.994 - - 0.994 - - - - - - histidyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-040912-152]
80. tarbp2 ENSDARG00000070471 1946 0.994 0.994 - - - - - - - - TAR (HIV) RNA binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8085]
81. taf6l ENSDARG00000079684 1408 0.994 0.994 - - - - - - - - TAF6-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor [Source:ZFIN;Acc:ZDB-GENE-030131-6789]
82. wdr3 ENSDARG00000011079 1403 0.994 0.994 - - - - - - - - WD repeat domain 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9830]
83. calub ENSDARG00000005115 1478 0.994 0.994 - - - - - - - - calumenin b [Source:ZFIN;Acc:ZDB-GENE-040426-1251]
84. cbx3b ENSDARG00000092158 1976 0.994 0.994 - - - - - - - - chromobox homolog 3b [Source:ZFIN;Acc:ZDB-GENE-070628-2]
85. vars ENSDARG00000044575 1367 0.994 0.994 - - - - - - - - valyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-010601-1]
86. ep300b ENSDARG00000061108 5173 0.993 0.993 - - - - - - - - E1A binding protein p300 b [Source:ZFIN;Acc:ZDB-GENE-080403-15]
87. hoxb7a ENSDARG00000056030 1212 0.993 0.993 - - - - - - - - homeobox B7a [Source:ZFIN;Acc:ZDB-GENE-000329-2]
88. TMEM150A_2 TMEM150A_2 739 0.993 0.993 - - - - - - - -
89. aclya ENSDARG00000099079 2324 0.993 0.993 - - - - - - - - ATP citrate lyase a [Source:ZFIN;Acc:ZDB-GENE-031113-1]
90. selt1b 1396 0.992 0.992 - - - - - - - - selenoprotein T, 1b
91. cilp ENSDARG00000053362 1429 0.992 0.992 - - - - - - - - cartilage intermediate layer protein, nucleotide pyrophosphohydrolase [Source:ZFIN;Acc:ZDB-GENE-050208-76]
92. epas1b ENSDARG00000057671, ENSDARG00000113561, ENSDARG00000115742 1306 0.992 0.992 - - - - - - - - endothelial PAS domain protein 1b [Source:ZFIN;Acc:ZDB-GENE-060607-11]
93. gpc1b ENSDARG00000090585 1393 0.992 0.992 - - - - - - - - glypican 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1306]
94. nsfb ENSDARG00000038991, ENSDARG00000109915 1443 0.992 0.992 - - - - - - - - N-ethylmaleimide-sensitive factor b [Source:ZFIN;Acc:ZDB-GENE-050808-1]
95. rims2a ENSDARG00000101606 1088 0.991 0.991 - - - - - - - - regulating synaptic membrane exocytosis 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1656]
96. lsm8 ENSDARG00000091656, ENSDARG00000111914 2751 0.991 0.991 - - - - - - - - LSM8 homolog, U6 small nuclear RNA associated [Source:ZFIN;Acc:ZDB-GENE-070629-3]
97. CU571336.1 ENSDARG00000099892 2164 0.991 0.991 - - - - - - - -
98. sgk2b ENSDARG00000006598 1039 0.991 0.991 - - - - - - - - serum/glucocorticoid regulated kinase 2b [Source:ZFIN;Acc:ZDB-GENE-060929-44]
99. AL929007.1 AL929007.1 3649 0.991 0.991 - - - - - - - -
100. mat2b ENSDARG00000012932 3146 0.991 0.991 - - - - - - - - methionine adenosyltransferase II, beta [Source:ZFIN;Acc:ZDB-GENE-030131-786]

There are 1006 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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