Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for ercc3

Gene Name Gene ID Reads Annotation
ercc3 ENSDARG00000002402 340 excision repair cross-complementation group 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3043]










Genes with expression patterns similar to ercc3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ercc3 ENSDARG00000002402 340 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 excision repair cross-complementation group 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3043]
2. si:ch211-10a23.2 ENSDARG00000060656 471 2.405 0.705 0.761 - 0.939 - - - - - si:ch211-10a23.2 [Source:ZFIN;Acc:ZDB-GENE-090313-9]
3. marcksa ENSDARG00000004049 2518 2.297 - - - 0.860 - - 0.720 - 0.717 myristoylated alanine-rich protein kinase C substrate a [Source:ZFIN;Acc:ZDB-GENE-050522-145]
4. HTRA4 ENSDARG00000005943 77 1.829 - 0.861 - 0.968 - - - - - HtrA serine peptidase 4 [Source:ZFIN;Acc:ZDB-GENE-131120-192]
5. dmbx1b ENSDARG00000002510 351 1.75 - 0.818 - 0.932 - - - - - diencephalon/mesencephalon homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-050417-97]
6. pdxka ENSDARG00000088959 217 1.746 - 0.987 - - - 0.759 - - - pyridoxal (pyridoxine, vitamin B6) kinase a [Source:ZFIN;Acc:ZDB-GENE-030131-8376]
7. creb1b ENSDARG00000093420 524 1.73 - - - 0.919 - - 0.811 - - cAMP responsive element binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-050417-355]
8. si:ch73-387e10.3 si:ch73-387e10.3 517 1.728 - 0.785 - 0.943 - - - - -
9. slc25a35 ENSDARG00000102783 129 1.726 - 0.919 - - - 0.807 - - - solute carrier family 25, member 35 [Source:ZFIN;Acc:ZDB-GENE-060526-142]
10. rexo1 ENSDARG00000026986 770 1.716 - - - 0.973 - - 0.743 - - REX1, RNA exonuclease 1 homolog [Source:ZFIN;Acc:ZDB-GENE-030131-1650]
11. trmt2b ENSDARG00000033967 127 1.704 - - - 0.974 - 0.730 - - - tRNA methyltransferase 2 homolog B [Source:ZFIN;Acc:ZDB-GENE-050809-101]
12. CDKN1C CDKN1C 667 1.697 - - - 0.959 - - 0.738 - -
13. DHX36 ENSDARG00000101059 314 1.688 - - - 0.974 - - 0.714 - - DEAH (Asp-Glu-Ala-His) box polypeptide 36 [Source:ZFIN;Acc:ZDB-GENE-050419-20]
14. znhit2 ENSDARG00000030805 197 1.686 - 0.717 - 0.969 - - - - - zinc finger, HIT-type containing 2 [Source:ZFIN;Acc:ZDB-GENE-061103-46]
15. zgc:173705 ENSDARG00000105137, ENSDARG00000114437 83 1.684 0.713 - - 0.971 - - - - - zgc:173705 [Source:ZFIN;Acc:ZDB-GENE-080212-6]
16. tapt1b ENSDARG00000061143, ENSDARG00000109798, ENSDARG00000112241 482 1.679 - - - 0.973 - - 0.706 - - transmembrane anterior posterior transformation 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4025]
17. si:dkey-56e3.3 ENSDARG00000075194 491 1.672 - 0.817 - 0.855 - - - - - si:dkey-56e3.3 [Source:ZFIN;Acc:ZDB-GENE-050411-91]
18. si:dkey-219c3.2 ENSDARG00000075805 619 1.665 - - - 0.955 - - - 0.710 - si:dkey-219c3.2 [Source:ZFIN;Acc:ZDB-GENE-090313-238]
19. sorbs2a ENSDARG00000003046 242 1.664 - 0.836 - 0.828 - - - - - sorbin and SH3 domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-070308-2]
20. metap1d ENSDARG00000019715, ENSDARG00000112086 236 1.663 - - - 0.852 - 0.811 - - - methionyl aminopeptidase type 1D (mitochondrial) [Source:ZFIN;Acc:ZDB-GENE-050522-71]
21. cd40 ENSDARG00000054968 90 1.654 - 0.908 - - - - 0.746 - - CD40 molecule, TNF receptor superfamily member 5 [Source:ZFIN;Acc:ZDB-GENE-090313-95]
22. usp42 ENSDARG00000077300 926 1.648 - - - 0.864 - - - - 0.784 ubiquitin specific peptidase 42 [Source:ZFIN;Acc:ZDB-GENE-030131-5739]
23. adprhl2 ENSDARG00000019338, ENSDARG00000110712 652 1.639 - - - 0.853 - - 0.786 - - ADP-ribosylhydrolase like 2 [Source:ZFIN;Acc:ZDB-GENE-040912-85]
24. SHF SHF 92 1.636 - 0.836 - - - 0.800 - - -
25. ch25hl1.1 ENSDARG00000039381, ENSDARG00000109469, ENSDARG00000113169 838 1.634 - 0.861 - 0.773 - - - - - cholesterol 25-hydroxylase like 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8617]
26. srrm2 ENSDARG00000037965 1967 1.631 - - - 0.930 - 0.701 - - - serine/arginine repetitive matrix 2 [Source:ZFIN;Acc:ZDB-GENE-050522-399]
27. sephs1 ENSDARG00000058292 3347 1.603 - - - 0.843 - - - - 0.760 selenophosphate synthetase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3670]
28. rybpa ENSDARG00000037773 904 1.6 - - - 0.899 - - - - 0.701 RING1 and YY1 binding protein a [Source:ZFIN;Acc:ZDB-GENE-030424-3]
29. BX511263.1 BX511263.1 64 1.586 - 0.861 - - - - 0.725 - -
30. slc6a6a ENSDARG00000012534 183 1.571 - 0.840 - - - 0.731 - - - solute carrier family 6 (neurotransmitter transporter), member 6a [Source:ZFIN;Acc:ZDB-GENE-081104-1]
31. grm6b ENSDARG00000025671, ENSDARG00000117152 118 1.565 - 0.761 - - - 0.804 - - - glutamate receptor, metabotropic 6b [Source:ZFIN;Acc:ZDB-GENE-021120-2]
32. nceh1a ENSDARG00000020427 35 1.541 0.713 0.828 - - - - - - - neutral cholesterol ester hydrolase 1a [Source:ZFIN;Acc:ZDB-GENE-040711-2]
33. gna13b ENSDARG00000037924 1963 1.52 - 0.789 - 0.731 - - - - - guanine nucleotide binding protein (G protein), alpha 13b [Source:ZFIN;Acc:ZDB-GENE-030131-8277]
34. chrac1 ENSDARG00000042337 2590 1.519 - - - 0.796 - - - - 0.723 chromatin accessibility complex 1 [Source:ZFIN;Acc:ZDB-GENE-050227-18]
35. EFNA2 EFNA2 640 1.518 - - - 0.708 - - 0.810 - -
36. pex16 ENSDARG00000058202 486 1.514 - - - 0.784 - - 0.730 - - peroxisomal biogenesis factor 16 [Source:ZFIN;Acc:ZDB-GENE-050626-49]
37. scamp5 scamp5 797 1.502 - 0.764 - 0.738 - - - - -
38. si:ch211-288d18.1 ENSDARG00000011088 255 1.494 - 0.773 - - - - 0.721 - - si:ch211-288d18.1 [Source:ZFIN;Acc:ZDB-GENE-060503-323]
39. plekhg7 ENSDARG00000062855 308 1.488 - - - - - 0.767 0.721 - - pleckstrin homology domain containing, family G (with RhoGef domain) member 7 [Source:ZFIN;Acc:ZDB-GENE-070410-15]
40. brd1a ENSDARG00000013596, ENSDARG00000116694 547 1.486 - - - - - - 0.767 - 0.719 bromodomain containing 1a [Source:ZFIN;Acc:ZDB-GENE-041008-168]
41. tbrg1 ENSDARG00000074996 733 1.484 - 0.737 - 0.747 - - - - - transforming growth factor beta regulator 1 [Source:ZFIN;Acc:ZDB-GENE-080220-62]
42. SHISA8 SHISA8 58 1.484 - 0.745 - - - 0.739 - - -
43. wu:fb30e12 wu:fb30e12 1254 1.484 - - - 0.738 - - - - 0.746
44. armc1l ENSDARG00000020887 1219 1.469 - - - 0.720 - - - - 0.749 armadillo repeat containing 1, like [Source:ZFIN;Acc:ZDB-GENE-030131-9819]
45. rassf1 ENSDARG00000004840 1248 1.453 0.725 - - 0.728 - - - - - Ras association (RalGDS/AF-6) domain family 1 [Source:ZFIN;Acc:ZDB-GENE-040912-14]
46. CABZ01064973.1 CABZ01064973.1 160 1.439 - - - - 0.728 0.711 - - -
47. zgc:173709 86 1.435 0.723 - - - - 0.712 - - - zgc:173709
48. arhgap19 ENSDARG00000083189 210 1.434 - - - - - 0.718 0.716 - - Rho GTPase activating protein 19 [Source:ZFIN;Acc:ZDB-GENE-100922-157]
49. lgi1a ENSDARG00000020493 1218 1.433 - - - - - - 0.729 - 0.704 leucine-rich, glioma inactivated 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1731]
50. si:dkey-283b15.3 si:dkey-283b15.3 81 0.975 - - - 0.975 - - - - -
51. aanat2 ENSDARG00000079802 175 0.974 - - - 0.974 - - - - - arylalkylamine N-acetyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-991019-6]
52. si:ch211-59m15.1 87 0.973 - - - 0.973 - - - - - si:ch211-59m15.1
53. ADCY3 ADCY3 537 0.973 - - - 0.973 - - - - -
54. gnav1 ENSDARG00000043006 305 0.972 - - - 0.972 - - - - - guanine nucleotide binding protein (G protein) alpha v1 [Source:ZFIN;Acc:ZDB-GENE-081031-92]
55. rs1 rs1 70 0.972 - - - 0.972 - - - - -
56. mctp2a ENSDARG00000001414 307 0.972 - - - 0.972 - - - - - multiple C2 domains, transmembrane 2a [Source:ZFIN;Acc:ZDB-GENE-040724-63]
57. zgc:165525 zgc:165525 207 0.972 - - - 0.972 - - - - -
58. zgc:165515 ENSDARG00000116300 182 0.972 - - - 0.972 - - - - - zgc:165515 [Source:ZFIN;Acc:ZDB-GENE-030131-1772]
59. ZCCHC2 ENSDARG00000067950 204 0.972 - - - 0.972 - - - - - zinc finger, CCHC domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-070912-269]
60. wasb ENSDARG00000026350 139 0.971 - - - 0.971 - - - - - Wiskott-Aldrich syndrome (eczema-thrombocytopenia) b [Source:ZFIN;Acc:ZDB-GENE-030131-7098]
61. tuba7l ENSDARG00000104643 33 0.97 - - - 0.970 - - - - - tubulin, alpha 7 like [Source:ZFIN;Acc:ZDB-GENE-040704-78]
62. eef1a1a ENSDARG00000039502 234 0.97 - - - 0.970 - - - - - eukaryotic translation elongation factor 1 alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-8278]
63. spns2 ENSDARG00000061017, ENSDARG00000114768 301 0.97 - - - 0.970 - - - - - spinster homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-5843]
64. ptk6b ENSDARG00000059956 44 0.97 - - - 0.970 - - - - - PTK6 protein tyrosine kinase 6b [Source:ZFIN;Acc:ZDB-GENE-060929-1150]
65. BX000999.4_1 BX000999.4_1 222 0.97 - - - 0.970 - - - - -
66. CU639413.2 CU639413.2 33 0.97 - - - 0.970 - - - - -
67. TP53BP2 TP53BP2 217 0.97 - - - 0.970 - - - - -
68. nr4a2b ENSDARG00000044532 103 0.97 - - - 0.970 - - - - - nuclear receptor subfamily 4, group A, member 2b [Source:ZFIN;Acc:ZDB-GENE-040718-103]
69. supt20 ENSDARG00000078658 713 0.97 - - - 0.970 - - - - - SPT20 homolog, SAGA complex component [Source:ZFIN;Acc:ZDB-GENE-091204-264]
70. slc3a1 ENSDARG00000017165 136 0.969 - - - 0.969 - - - - - solute carrier family 3 (amino acid transporter heavy chain), member 1 [Source:ZFIN;Acc:ZDB-GENE-090313-225]
71. ppfia2 ENSDARG00000013000 45 0.969 - - - 0.969 - - - - - protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7905]
72. SYNGAP1_1 SYNGAP1_1 66 0.969 - - - 0.969 - - - - -
73. JMJD1C JMJD1C 289 0.969 - - - 0.969 - - - - -
74. ulk3 ENSDARG00000101661 69 0.969 - - - 0.969 - - - - - unc-51 like kinase 3 [Source:ZFIN;Acc:ZDB-GENE-070410-33]
75. tmem104 ENSDARG00000088560 859 0.969 - - - 0.969 - - - - - transmembrane protein 104 [Source:ZFIN;Acc:ZDB-GENE-070822-4]
76. cep76 ENSDARG00000058319 143 0.969 - - - 0.969 - - - - - centrosomal protein 76 [Source:ZFIN;Acc:ZDB-GENE-070820-5]
77. far1 ENSDARG00000006899 204 0.968 - - - 0.968 - - - - - fatty acyl CoA reductase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2908]
78. dpf2 ENSDARG00000012219 666 0.968 - - - 0.968 - - - - - D4, zinc and double PHD fingers family 2 [Source:ZFIN;Acc:ZDB-GENE-041024-2]
79. GPN1 ENSDARG00000043928 566 0.968 - - - 0.968 - - - - - GPN-loop GTPase 1 [Source:ZFIN;Acc:ZDB-GENE-040801-154]
80. znf710a ENSDARG00000014680 582 0.968 - - - 0.968 - - - - - zinc finger protein 710a [Source:ZFIN;Acc:ZDB-GENE-030131-5559]
81. dixdc1b ENSDARG00000056267 307 0.968 - - - 0.968 - - - - - DIX domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-041008-148]
82. ftr65 202 0.968 - - - 0.968 - - - - - finTRIM family, member 65
83. DIP2C DIP2C 222 0.967 - - - 0.967 - - - - -
84. GPR180 73 0.967 - - - 0.967 - - - - - G protein-coupled receptor 180, transcript variant X2
85. lhx9 ENSDARG00000056979 249 0.967 - - - 0.967 - - - - - LIM homeobox 9 [Source:ZFIN;Acc:ZDB-GENE-050417-210]
86. si:ch1073-127d16.1 ENSDARG00000087674 105 0.967 - - - 0.967 - - - - - si:ch1073-127d16.1 [Source:ZFIN;Acc:ZDB-GENE-120214-30]
87. taf1b ENSDARG00000028937 879 0.967 - - - 0.967 - - - - - TATA box binding protein (Tbp)-associated factor, RNA polymerase I, B [Source:ZFIN;Acc:ZDB-GENE-041008-2]
88. PARP12 PARP12 77 0.967 - - - 0.967 - - - - -
89. gng2_1 ENSDARG00000056831 113 0.967 - - - 0.967 - - - - - guanine nucleotide binding protein (G protein), gamma 2 [Source:ZFIN;Acc:ZDB-GENE-050417-59]
90. tdrd3 ENSDARG00000025421 633 0.967 - - - 0.967 - - - - - tudor domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-19]
91. rxrba ENSDARG00000078954 85 0.967 - - - 0.967 - - - - - retinoid x receptor, beta a [Source:ZFIN;Acc:ZDB-GENE-980526-436]
92. timm23 timm23 2712 0.966 - - - 0.966 - - - - -
93. pomcb ENSDARG00000069307 72 0.966 - - - 0.966 - - - - - proopiomelanocortin b [Source:ZFIN;Acc:ZDB-GENE-041014-294]
94. si:dkey-100n10.2 101 0.966 - - - 0.966 - - - - - si:dkey-100n10.2
95. ube2z ENSDARG00000029215 1059 0.965 - - - 0.965 - - - - - ubiquitin-conjugating enzyme E2Z [Source:ZFIN;Acc:ZDB-GENE-040718-15]
96. acp6 ENSDARG00000040064 197 0.965 - - - 0.965 - - - - - acid phosphatase 6, lysophosphatidic [Source:ZFIN;Acc:ZDB-GENE-050208-290]
97. CABZ01051991.1 CABZ01051991.1 346 0.965 - - - 0.965 - - - - -
98. mns1 ENSDARG00000060169, ENSDARG00000110835 283 0.964 - - - 0.964 - - - - - meiosis-specific nuclear structural 1 [Source:ZFIN;Acc:ZDB-GENE-030521-42]
99. rapgef5a ENSDARG00000075271 282 0.963 - - - 0.963 - - - - - Rap guanine nucleotide exchange factor (GEF) 5a [Source:ZFIN;Acc:ZDB-GENE-030131-7681]
100. si:dkeyp-20e4.3 si:dkeyp-20e4.3 68 0.963 - - - 0.963 - - - - -

There are 1276 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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