Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for ercc1

Gene Name Gene ID Reads Annotation
ercc1 ENSDARG00000031680 900 excision repair cross-complementation group 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2606]










Genes with expression patterns similar to ercc1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ercc1 ENSDARG00000031680 900 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 excision repair cross-complementation group 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2606]
2. ccdc12 ENSDARG00000023003, ENSDARG00000113770 1731 2.343 - 0.817 - - - - 0.740 0.786 - coiled-coil domain containing 12 [Source:ZFIN;Acc:ZDB-GENE-040801-108]
3. TIMM22 ENSDARG00000091413 957 2.207 - 0.775 - - - 0.716 0.716 - - translocase of inner mitochondrial membrane 22 [Source:HGNC Symbol;Acc:HGNC:17317]
4. CBFA2T3 ENSDARG00000079012 6799 2.174 - 0.706 - 0.728 - - - 0.740 - core-binding factor, runt domain, alpha subunit 2; translocated to, 3 [Source:ZFIN;Acc:ZDB-GENE-070209-2]
5. cetn3 ENSDARG00000011825 1087 1.831 - - - - - - 0.852 0.979 - centrin 3 [Source:ZFIN;Acc:ZDB-GENE-050522-152]
6. syne1b ENSDARG00000063068 786 1.765 - - - - - - 0.795 0.970 - spectrin repeat containing, nuclear envelope 1b [Source:ZFIN;Acc:ZDB-GENE-071218-4]
7. smcr8a ENSDARG00000052818 559 1.757 - - - - - - 0.782 0.975 - Smith-Magenis syndrome chromosome region, candidate 8a [Source:ZFIN;Acc:ZDB-GENE-071212-4]
8. ZNF70_2 ZNF70_2 1866 1.745 - - - - - - 0.766 0.979 -
9. si:ch211-113p18.3 ENSDARG00000087835 377 1.74 - - - - - - 0.762 0.978 - si:ch211-113p18.3 [Source:ZFIN;Acc:ZDB-GENE-030131-4983]
10. CABZ01043370.1 CABZ01043370.1 2013 1.691 - - - - - - 0.733 0.958 -
11. uchl5 ENSDARG00000103404, ENSDARG00000110434 4029 1.683 - - - - - - 0.725 0.958 - ubiquitin carboxyl-terminal hydrolase L5 [Source:ZFIN;Acc:ZDB-GENE-040426-2051]
12. sh2d3ca ENSDARG00000028099 1037 1.673 - - - 0.841 - - 0.832 - - SH2 domain containing 3Ca [Source:ZFIN;Acc:ZDB-GENE-080102-1]
13. ep300b ENSDARG00000061108 5173 1.67 - - - - - - 0.708 0.962 - E1A binding protein p300 b [Source:ZFIN;Acc:ZDB-GENE-080403-15]
14. ppig ENSDARG00000044431 3427 1.651 - - - - - - 0.780 0.871 - peptidylprolyl isomerase G (cyclophilin G) [Source:ZFIN;Acc:ZDB-GENE-040426-2822]
15. prp19 prp19 4804 1.649 - - - - - - 0.727 0.922 -
16. C21H5orf15 C21H5orf15 2318 1.636 - - - - - - 0.702 0.934 -
17. apopt1 ENSDARG00000092473 682 1.629 - 0.713 - - - - - 0.916 - apoptogenic 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-090313-66]
18. rnmt ENSDARG00000070553 1743 1.61 - 0.787 - - - - 0.823 - - RNA (guanine-7-) methyltransferase [Source:ZFIN;Acc:ZDB-GENE-041008-25]
19. nr2f2 ENSDARG00000040926 5213 1.579 - 0.797 - - - - - 0.782 - nuclear receptor subfamily 2, group F, member 2 [Source:ZFIN;Acc:ZDB-GENE-990415-252]
20. usf1 ENSDARG00000041689 1619 1.567 - - - - - - 0.807 0.760 - upstream transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1072]
21. aqp1a.1 ENSDARG00000023713 3237 1.563 - 0.756 - - - - - 0.807 - aquaporin 1a (Colton blood group), tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7764]
22. si:ch211-166e11.5 ENSDARG00000100407 576 1.561 - 0.837 - - - - 0.724 - - si:ch211-166e11.5 [Source:ZFIN;Acc:ZDB-GENE-070912-142]
23. htt ENSDARG00000052866 844 1.546 - - - 0.738 - - 0.808 - - huntingtin [Source:ZFIN;Acc:ZDB-GENE-990415-131]
24. dek ENSDARG00000070108 2262 1.534 - - - - - - - 0.780 0.754 DEK proto-oncogene [Source:ZFIN;Acc:ZDB-GENE-060512-191]
25. dnajc5ab ENSDARG00000004836 2923 1.509 - 0.703 - - - - 0.806 - - DnaJ (Hsp40) homolog, subfamily C, member 5ab [Source:ZFIN;Acc:ZDB-GENE-081021-2]
26. cct8 ENSDARG00000008243 6843 1.506 - - - - - 0.715 - 0.791 - chaperonin containing TCP1, subunit 8 (theta) [Source:ZFIN;Acc:ZDB-GENE-040426-876]
27. prmt1 ENSDARG00000010246 11311 1.472 - 0.721 - - - - 0.751 - - protein arginine methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-693]
28. dlgap4a ENSDARG00000060849 1813 1.472 - - - - - - 0.747 - 0.725 discs, large (Drosophila) homolog-associated protein 4a [Source:ZFIN;Acc:ZDB-GENE-080219-51]
29. nipblb ENSDARG00000061052 6109 1.468 - - - - - 0.718 - 0.750 - nipped-B homolog b (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-6070]
30. uspl1 ENSDARG00000034825, ENSDARG00000109866 457 1.464 - - - 0.716 - - 0.748 - - ubiquitin specific peptidase like 1 [Source:ZFIN;Acc:ZDB-GENE-040930-7]
31. sf1 ENSDARG00000008188 5142 1.464 - - - - - - 0.744 0.720 - splicing factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2492]
32. nasp ENSDARG00000039208, ENSDARG00000114134 873 1.451 - - 0.705 - - - 0.746 - - nuclear autoantigenic sperm protein (histone-binding) [Source:ZFIN;Acc:ZDB-GENE-030131-5511]
33. kirrela 1170 1.449 - 0.705 - - - - 0.744 - - kin of IRRE like a, transcript variant X2
34. pds5b ENSDARG00000098897 1732 1.447 - 0.714 - - - - 0.733 - - PDS5 cohesin associated factor B [Source:ZFIN;Acc:ZDB-GENE-091217-2]
35. zgc:110540 ENSDARG00000054929 2154 1.446 - 0.731 - - - - 0.715 - - zgc:110540 [Source:ZFIN;Acc:ZDB-GENE-050327-77]
36. atp2a2a ENSDARG00000029439 940 1.445 - 0.712 - - - - 0.733 - - ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2a [Source:ZFIN;Acc:ZDB-GENE-040426-702]
37. popdc3 ENSDARG00000058551 538 1.44 - 0.712 - - - - 0.728 - - popeye domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040624-10]
38. e2f4 ENSDARG00000101578, ENSDARG00000109320 1783 1.44 - 0.720 - - - 0.720 - - - E2F transcription factor 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2773]
39. snrpd2 ENSDARG00000040440, ENSDARG00000110285 4301 1.436 - - - - - - 0.725 0.711 - small nuclear ribonucleoprotein D2 polypeptide [Source:ZFIN;Acc:ZDB-GENE-040914-10]
40. otpb ENSDARG00000058379 1143 1.421 - - - - - - 0.717 0.704 - orthopedia homeobox b [Source:ZFIN;Acc:ZDB-GENE-990708-7]
41. pop7 ENSDARG00000036394 1684 1.418 0.705 - - - - - 0.713 - - POP7 homolog, ribonuclease P/MRP subunit [Source:ZFIN;Acc:ZDB-GENE-041010-88]
42. h3f3b.1_1 ENSDARG00000020504, ENSDARG00000068434, ENSDARG00000068436 26947 1.411 - - - - - - 0.703 0.708 - H3 histone, family 3B.1 [Source:ZFIN;Acc:ZDB-GENE-050417-65]
43. sp1 ENSDARG00000088347 1697 0.986 - - - - - - - 0.986 - sp1 transcription factor [Source:ZFIN;Acc:ZDB-GENE-030131-2829]
44. SENP7 SENP7 1097 0.981 - - - - - - - 0.981 -
45. ek1 ENSDARG00000020080 742 0.981 - - - - - - - 0.981 - eph-like kinase 1 [Source:ZFIN;Acc:ZDB-GENE-990415-58]
46. rbm4.1 ENSDARG00000036386 625 0.98 - - - - - - - 0.980 - RNA binding motif protein 4.1 [Source:ZFIN;Acc:ZDB-GENE-030131-3902]
47. psenen ENSDARG00000068698 2777 0.98 - - - - - - - 0.980 - presenilin enhancer, gamma-secretase subunit [Source:ZFIN;Acc:ZDB-GENE-040218-1]
48. brwd1 ENSDARG00000074747, ENSDARG00000111353 1008 0.98 - - - - - - - 0.980 - bromodomain and WD repeat domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041111-120]
49. atcaya ENSDARG00000071678 344 0.98 - - - - - - - 0.980 - ataxia, cerebellar, Cayman type a [Source:ZFIN;Acc:ZDB-GENE-070705-185]
50. atn1 ENSDARG00000092067 257 0.98 - - - - - - - 0.980 - atrophin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-426]
51. hsd17b12b ENSDARG00000035872 631 0.98 - - - - - - - 0.980 - hydroxysteroid (17-beta) dehydrogenase 12b [Source:ZFIN;Acc:ZDB-GENE-030131-1346]
52. ATL2 ENSDARG00000057719, ENSDARG00000113378, ENSDARG00000113487 1987 0.98 - - - - - - - 0.980 - atlastin GTPase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6505]
53. prpf31 ENSDARG00000095904 526 0.979 - - - - - - - 0.979 - PRP31 pre-mRNA processing factor 31 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-1561]
54. ankrd37 ENSDARG00000056376 131 0.979 - - - - - - - 0.979 - ankyrin repeat domain 37 [Source:ZFIN;Acc:ZDB-GENE-070308-1]
55. tceb1a 969 0.979 - - - - - - - 0.979 - transcription elongation factor B (SIII), polypeptide 1a, transcript variant X4
56. kif7 ENSDARG00000033099 971 0.979 - - - - - - - 0.979 - kinesin family member 7 [Source:ZFIN;Acc:ZDB-GENE-050307-1]
57. bcl9 ENSDARG00000036687 1124 0.979 - - - - - - - 0.979 - B cell CLL/lymphoma 9 [Source:ZFIN;Acc:ZDB-GENE-090313-135]
58. cks2 ENSDARG00000071410, ENSDARG00000116198 966 0.979 - - - - - - - 0.979 - CDC28 protein kinase regulatory subunit 2 [Source:ZFIN;Acc:ZDB-GENE-050208-508]
59. abcb6b ENSDARG00000074254 600 0.979 - - - - - - - 0.979 - ATP-binding cassette, sub-family B (MDR/TAP), member 6b [Source:ZFIN;Acc:ZDB-GENE-070912-584]
60. cbll1 ENSDARG00000015222 995 0.979 - - - - - - - 0.979 - Cbl proto-oncogene-like 1, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-040426-691]
61. SYNDIG1 ENSDARG00000100751 165 0.979 - - - - - - - 0.979 - synapse differentiation inducing 1 [Source:HGNC Symbol;Acc:HGNC:15885]
62. sult4a1 ENSDARG00000101967 205 0.979 - - - - - - - 0.979 - sulfotransferase family 4A, member 1 [Source:ZFIN;Acc:ZDB-GENE-060421-2705]
63. wu:fj13e08 1223 0.979 - - - - - - - 0.979 - wu:fj13e08
64. lrrc24 ENSDARG00000101704 224 0.979 - - - - - - - 0.979 - leucine rich repeat containing 24 [Source:ZFIN;Acc:ZDB-GENE-060503-496]
65. aurka ENSDARG00000012485 3304 0.979 - - - - - - - 0.979 - aurora kinase A [Source:ZFIN;Acc:ZDB-GENE-040801-161]
66. CABZ01087670.1 CABZ01087670.1 411 0.979 - - - - - - - 0.979 -
67. tmem88b ENSDARG00000069388 501 0.978 - - - - - - - 0.978 - transmembrane protein 88 b [Source:ZFIN;Acc:ZDB-GENE-060929-644]
68. gapvd1 ENSDARG00000090183, ENSDARG00000113177 611 0.978 - - - - - - - 0.978 - GTPase activating protein and VPS9 domains 1 [Source:ZFIN;Acc:ZDB-GENE-040718-117]
69. phf10 ENSDARG00000070084 1210 0.978 - - - - - - - 0.978 - PHD finger protein 10 [Source:ZFIN;Acc:ZDB-GENE-040426-1573]
70. asnsd1 830 0.978 - - - - - - - 0.978 - asparagine synthetase domain containing 1, transcript variant X1
71. si:ch211-241n15.2 si:ch211-241n15.2 435 0.978 - - - - - - - 0.978 -
72. GATC ENSDARG00000056855 551 0.978 - - - - - - - 0.978 - glutamyl-tRNA amidotransferase subunit C [Source:ZFIN;Acc:ZDB-GENE-060526-381]
73. C20H1orf198 C20H1orf198 246 0.978 - - - - - - - 0.978 -
74. map9 ENSDARG00000037276, ENSDARG00000115648 581 0.978 - - - - - - - 0.978 - microtubule-associated protein 9 [Source:ZFIN;Acc:ZDB-GENE-080225-36]
75. mul1b ENSDARG00000052527 431 0.978 - - - - - - - 0.978 - mitochondrial E3 ubiquitin protein ligase 1b [Source:ZFIN;Acc:ZDB-GENE-050208-236]
76. kidins220b ENSDARG00000017338 1937 0.977 - - - - - - - 0.977 - kinase D-interacting substrate 220b [Source:ZFIN;Acc:ZDB-GENE-030131-7824]
77. lhx1a ENSDARG00000014018 958 0.977 - - - - - - - 0.977 - LIM homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-980526-347]
78. ftr15 122 0.977 - - - - - - - 0.977 - finTRIM family, member 15
79. snrnp40 ENSDARG00000023160 1108 0.977 - - - - - - - 0.977 - small nuclear ribonucleoprotein 40 (U5) [Source:ZFIN;Acc:ZDB-GENE-040426-978]
80. SIPA1 SIPA1 302 0.977 - - - - - - - 0.977 -
81. scly ENSDARG00000073813 578 0.977 - - - - - - - 0.977 - selenocysteine lyase [Source:ZFIN;Acc:ZDB-GENE-080204-30]
82. CDC42SE2 ENSDARG00000094577, ENSDARG00000113403 606 0.977 - - - - - - - 0.977 - CDC42 small effector 2 [Source:ZFIN;Acc:ZDB-GENE-080204-45]
83. lig4 ENSDARG00000060620 369 0.977 - - - - - - - 0.977 - ligase IV, DNA, ATP-dependent [Source:ZFIN;Acc:ZDB-GENE-070820-10]
84. btg3 ENSDARG00000069065, ENSDARG00000115730 1632 0.977 - - - - - - - 0.977 - B-cell translocation gene 3 [Source:ZFIN;Acc:ZDB-GENE-031113-19]
85. ptprz1b ENSDARG00000020871 435 0.977 - - - - - - - 0.977 - protein tyrosine phosphatase, receptor-type, Z polypeptide 1b [Source:ZFIN;Acc:ZDB-GENE-050506-100]
86. fbxo11a ENSDARG00000061631, ENSDARG00000102294, ENSDARG00000112746 1129 0.977 - - - - - - - 0.977 - F-box protein 11a [Source:ZFIN;Acc:ZDB-GENE-061103-70]
87. GPR101 ENSDARG00000039218 157 0.977 - - - - - - - 0.977 - G protein-coupled receptor 101 [Source:ZFIN;Acc:ZDB-GENE-070914-1]
88. l3mbtl1a ENSDARG00000014828 119 0.977 - - - - - - - 0.977 - l(3)mbt-like 1a (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-090312-120]
89. si:dkey-117p18.2 si:dkey-117p18.2 104 0.977 - - - - - - - 0.977 -
90. slc29a4 ENSDARG00000059690 478 0.977 - - - - - - - 0.977 - solute carrier family 29 (equilibrative nucleoside transporter), member 4 [Source:ZFIN;Acc:ZDB-GENE-070112-1932]
91. DGKI 306 0.976 - - - - - - - 0.976 - diacylglycerol kinase, iota
92. gnl3l ENSDARG00000020595, ENSDARG00000109309 3582 0.976 - - - - - - - 0.976 - guanine nucleotide binding protein-like 3 (nucleolar)-like [Source:ZFIN;Acc:ZDB-GENE-040723-1]
93. CASKIN2_1 CASKIN2_1 2299 0.975 - - - - - - - 0.975 -
94. CABZ01069006.1 CABZ01069006.1 363 0.975 - - - - - - - 0.975 -
95. ANO8 ANO8 380 0.975 - - - - - - - 0.975 -
96. phc1 ENSDARG00000002971 924 0.975 - - - - - - - 0.975 - polyhomeotic homolog 1 [Source:ZFIN;Acc:ZDB-GENE-081022-39]
97. itga11a ENSDARG00000036086, ENSDARG00000111495 254 0.975 - - - - - - - 0.975 - integrin, alpha 11a [Source:ZFIN;Acc:ZDB-GENE-050324-1]
98. PREB ENSDARG00000101602 626 0.974 - - - - - - - 0.974 - prolactin regulatory element binding [Source:ZFIN;Acc:ZDB-GENE-040718-385]
99. onecutl ENSDARG00000040253 2143 0.974 - - - - - - - 0.974 - one cut domain, family member, like [Source:ZFIN;Acc:ZDB-GENE-020531-1]
100. slc1a3b ENSDARG00000043148 431 0.974 - - - - - - - 0.974 - solute carrier family 1 (glial high affinity glutamate transporter), member 3b [Source:ZFIN;Acc:ZDB-GENE-090708-3]

There are 891 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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