Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for emx3

Gene Name Gene ID Reads Annotation
emx3 ENSDARG00000020417 85 empty spiracles homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-990415-53]










Genes with expression patterns similar to emx3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. emx3 ENSDARG00000020417 85 8 1.000 1.000 1.000 1.000 1.000 - 1.000 1.000 1.000 empty spiracles homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-990415-53]
2. Mar-03 Mar-03 44 2.243 - 0.807 - - - - 0.726 - 0.710
3. ARHGAP42 ARHGAP42 53 1.851 0.961 0.890 - - - - - - -
4. ltc4s ENSDARG00000062598 138 1.845 0.921 - - - - - - 0.924 - leukotriene C4 synthase [Source:ZFIN;Acc:ZDB-GENE-110411-32]
5. tmem168b ENSDARG00000062168 17 1.825 0.981 - - - 0.844 - - - - transmembrane protein 168b [Source:ZFIN;Acc:ZDB-GENE-090406-3]
6. CR381673.1 ENSDARG00000098337 7 1.821 1.000 - - - - - - - 0.821
7. park2 42 1.783 0.976 0.807 - - - - - - - parkin RBR E3 ubiquitin protein ligase
8. CU596012.1 CU596012.1 24 1.782 0.961 - - - - - - - 0.821
9. ABCC10 ENSDARG00000077988, ENSDARG00000111885, ENSDARG00000113210 81 1.758 0.951 0.807 - - - - - - - ATP-binding cassette, sub-family C (CFTR/MRP), member 10 [Source:ZFIN;Acc:ZDB-GENE-050517-24]
10. FBXO4 ENSDARG00000074170 54 1.726 - 1.000 - - - - 0.726 - - F-box protein 4 [Source:ZFIN;Acc:ZDB-GENE-081104-415]
11. NMNAT3 ENSDARG00000077034 126 1.724 0.767 0.957 - - - - - - - nicotinamide nucleotide adenylyltransferase 3 [Source:HGNC Symbol;Acc:HGNC:20989]
12. si:ch211-147d7.5 ENSDARG00000095457 132 1.718 - 0.770 - - - - - 0.948 - si:ch211-147d7.5 [Source:ZFIN;Acc:ZDB-GENE-041014-353]
13. il17rd ENSDARG00000098359 1153 1.715 - - - - - - 0.872 0.843 - interleukin 17 receptor D [Source:ZFIN;Acc:ZDB-GENE-020320-5]
14. plcd1a ENSDARG00000059123 46 1.696 0.976 - - - - - 0.720 - - phospholipase C, delta 1a [Source:ZFIN;Acc:ZDB-GENE-071004-78]
15. CMTM8 CMTM8 71 1.692 0.941 0.751 - - - - - - -
16. ankrd44 ENSDARG00000026028 324 1.685 0.850 - - - - - 0.835 - - ankyrin repeat domain 44 [Source:ZFIN;Acc:ZDB-GENE-070912-605]
17. si:dkey-202i12.5 si:dkey-202i12.5 20 1.685 - - - - 0.864 - - - 0.821
18. slc12a4 ENSDARG00000014378 204 1.682 0.835 - - - - - - 0.847 - solute carrier family 12 (potassium/chloride transporter), member 4 [Source:ZFIN;Acc:ZDB-GENE-090218-27]
19. epd ENSDARG00000103498, ENSDARG00000117020 84 1.668 - 0.963 - - - - 0.705 - - ependymin [Source:ZFIN;Acc:ZDB-GENE-980526-111]
20. ASPH ENSDARG00000055945 214 1.666 0.956 0.710 - - - - - - - aspartate beta-hydroxylase [Source:ZFIN;Acc:ZDB-GENE-031112-5]
21. si:ch211-126i22.5 ENSDARG00000060911 209 1.659 0.928 0.731 - - - - - - - si:ch211-126i22.5 [Source:ZFIN;Acc:ZDB-GENE-091204-183]
22. tbr1a ENSDARG00000076259 341 1.658 - - 0.716 - - - - - 0.942 T-box, brain, 1a [Source:ZFIN;Acc:ZDB-GENE-060810-93]
23. zgc:165481 ENSDARG00000060092 95 1.656 - 0.807 - - 0.849 - - - - zgc:165481 [Source:ZFIN;Acc:ZDB-GENE-070615-21]
24. ERCC6L2 ENSDARG00000012403 236 1.652 - 0.739 - - - - - 0.913 - excision repair cross-complementation group 6-like 2 [Source:ZFIN;Acc:ZDB-GENE-110411-274]
25. gfod2 ENSDARG00000061145 263 1.639 0.895 0.744 - - - - - - - glucose-fructose oxidoreductase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-061103-64]
26. msgn1 ENSDARG00000070546 188 1.624 - - - - 0.849 - - - 0.775 mesogenin 1 [Source:ZFIN;Acc:ZDB-GENE-030722-1]
27. acap1 ENSDARG00000056346, ENSDARG00000109603 274 1.621 0.788 - - - - - - 0.833 - ArfGAP with coiled-coil, ankyrin repeat and PH domains 1 [Source:ZFIN;Acc:ZDB-GENE-070112-1242]
28. CU467646.1 ENSDARG00000075090 27 1.616 0.890 - - - - - 0.726 - - mucin-5AC-like [Source:NCBI gene;Acc:110439410]
29. ENSDARG00000035683 ENSDARG00000035683 219 1.613 - - - - 0.808 - 0.805 - -
30. gss ENSDARG00000037706, ENSDARG00000109538 33 1.61 - 0.749 - - - - 0.861 - - glutathione synthetase [Source:ZFIN;Acc:ZDB-GENE-041010-208]
31. JMJD1C JMJD1C 289 1.604 0.707 0.897 - - - - - - -
32. wu:fc75a09 ENSDARG00000111625 289 1.584 - 0.829 - - 0.755 - - - - wu:fc75a09 [Source:ZFIN;Acc:ZDB-GENE-030131-4139]
33. drc1 ENSDARG00000042182 39 1.575 - - - - 0.849 - - - 0.726 dynein regulatory complex subunit 1 homolog (Chlamydomonas) [Source:ZFIN;Acc:ZDB-GENE-041001-218]
34. eve1 ENSDARG00000056012 144 1.561 - - - - 0.777 - - 0.784 - even-skipped-like1 [Source:ZFIN;Acc:ZDB-GENE-980526-69]
35. g3bp2 ENSDARG00000014790 257 1.558 - 0.708 - - - - 0.850 - - GTPase activating protein (SH3 domain) binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-070112-1972]
36. tbc1d2b ENSDARG00000061986 247 1.547 - 0.798 - - - - - 0.749 - TBC1 domain family, member 2B [Source:ZFIN;Acc:ZDB-GENE-100922-148]
37. wnt8b ENSDARG00000006911 98 1.547 - - - 0.820 - - - - 0.727 wingless-type MMTV integration site family, member 8b [Source:ZFIN;Acc:ZDB-GENE-990415-279]
38. tm7sf2 ENSDARG00000032816, ENSDARG00000116444 70 1.518 - 0.744 - - 0.774 - - - - transmembrane 7 superfamily member 2 [Source:ZFIN;Acc:ZDB-GENE-041212-19]
39. exoc6b ENSDARG00000098874, ENSDARG00000110437 627 1.51 0.800 - - - - - 0.710 - - exocyst complex component 6B [Source:ZFIN;Acc:ZDB-GENE-060929-132]
40. fam222bb ENSDARG00000078578 779 1.509 0.761 - - - - - 0.748 - - family with sequence similarity 222, member Bb [Source:ZFIN;Acc:ZDB-GENE-110419-4]
41. sema5a ENSDARG00000058821 333 1.494 - - - - - - 0.794 0.700 - sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A [Source:ZFIN;Acc:ZDB-GENE-030131-8969]
42. CR627484.1 CR627484.1 452 1.487 - 0.784 - - 0.703 - - - -
43. wu:fu71h07 ENSDARG00000103860 558 1.467 0.732 - - - 0.735 - - - - wu:fu71h07 [Source:ZFIN;Acc:ZDB-GENE-050302-121]
44. thrab ENSDARG00000052654 315 1.466 0.715 - - - - - - 0.751 - thyroid hormone receptor alpha b [Source:ZFIN;Acc:ZDB-GENE-060613-1]
45. si:dkey-163m14.2 274 1.46 0.744 - - - - - - 0.716 - si:dkey-163m14.2
46. osgep ENSDARG00000045846 738 1.433 0.729 0.704 - - - - - - - O-sialoglycoprotein endopeptidase [Source:ZFIN;Acc:ZDB-GENE-030131-7880]
47. dao.3 ENSDARG00000035601 15 1 1.000 - - - - - - - - D-amino-acid oxidase, tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1894]
48. crybb3 ENSDARG00000041301 48 1 1.000 - - - - - - - - crystallin, beta B3 [Source:ZFIN;Acc:ZDB-GENE-060130-2]
49. si:ch211-242f23.8 ENSDARG00000087585 22 1 1.000 - - - - - - - - si:ch211-242f23.8 [Source:ZFIN;Acc:ZDB-GENE-091204-11]
50. AL928712.1 AL928712.1 101 1 1.000 - - - - - - - -
51. SNORD38 SNORD38 171 1 1.000 - - - - - - - -
52. MUC5AC MUC5AC 32 1 1.000 - - - - - - - -
53. fasn_1 ENSDARG00000087657 31 1 1.000 - - - - - - - - fatty acid synthase [Source:ZFIN;Acc:ZDB-GENE-030131-7802]
54. igsf5 igsf5 85 1 1.000 - - - - - - - -
55. CT573256.1 ENSDARG00000091657 18 1 1.000 - - - - - - - - serine/threonine-protein kinase VRK1-like [Source:NCBI gene;Acc:794952]
56. CU929356.4 CU929356.4 86 1 1.000 - - - - - - - -
57. si:ch73-138i16.1 ENSDARG00000095562 8 1 1.000 - - - - - - - - si:ch73-138i16.1 [Source:ZFIN;Acc:ZDB-GENE-070705-208]
58. zgc:173837 ENSDARG00000076949 24 1 1.000 - - - - - - - - zgc:173837 [Source:ZFIN;Acc:ZDB-GENE-080213-12]
59. lrrc4.2 ENSDARG00000003020 235 1 1.000 - - - - - - - - leucine rich repeat containing 4.2 [Source:ZFIN;Acc:ZDB-GENE-030131-7997]
60. RAB38 122 1 1.000 - - - - - - - - RAB38, member RAS oncogene family
61. CREB3L3 CREB3L3 24 1 1.000 - - - - - - - -
62. ZNF337_17 ZNF337_17 12 1 1.000 - - - - - - - -
63. lipt2 ENSDARG00000069852 14 1 1.000 - - - - - - - - lipoyl(octanoyl) transferase 2 [Source:ZFIN;Acc:ZDB-GENE-060312-18]
64. PRKCA_1 ENSDARG00000099841 12 1 1.000 - - - - - - - - protein kinase C alpha [Source:HGNC Symbol;Acc:HGNC:9393]
65. fam101a 4 1 1.000 - - - - - - - - family with sequence similarity 101, member A
66. ZNF648 ENSDARG00000104823 194 1 1.000 - - - - - - - - zinc finger protein 648 [Source:ZFIN;Acc:ZDB-GENE-120215-149]
67. sntg2 ENSDARG00000101660 19 1 1.000 - - - - - - - - syntrophin, gamma 2 [Source:ZFIN;Acc:ZDB-GENE-060526-196]
68. si:ch211-67f13.7 ENSDARG00000077845 8 1 1.000 - - - - - - - - si:ch211-67f13.7 [Source:ZFIN;Acc:ZDB-GENE-090313-126]
69. CU466279.1 CU466279.1 84 1 - 1.000 - - - - - - -
70. sptssb ENSDARG00000091658 42 1 - 1.000 - - - - - - - serine palmitoyltransferase, small subunit B [Source:ZFIN;Acc:ZDB-GENE-060421-6887]
71. si:ch73-248e21.5 ENSDARG00000088283 19 1 - 1.000 - - - - - - - si:ch73-248e21.5 [Source:ZFIN;Acc:ZDB-GENE-120215-255]
72. slc24a4b ENSDARG00000067509 33 1 1.000 - - - - - - - - solute carrier family 24 (sodium/potassium/calcium exchanger), member 4b [Source:ZFIN;Acc:ZDB-GENE-081031-75]
73. cyp2x6 ENSDARG00000079653, ENSDARG00000111425 33 1 1.000 - - - - - - - - cytochrome P450, family 2, subfamily X, polypeptide 6 [Source:ZFIN;Acc:ZDB-GENE-050320-144]
74. si:ch211-76m11.15 ENSDARG00000098979 6 1 1.000 - - - - - - - - si:ch211-76m11.15 [Source:ZFIN;Acc:ZDB-GENE-110411-136]
75. SYTL1 ENSDARG00000070094 282 1 1.000 - - - - - - - - synaptotagmin-like 1 [Source:ZFIN;Acc:ZDB-GENE-060503-439]
76. GPR180 73 1 1.000 - - - - - - - - G protein-coupled receptor 180, transcript variant X2
77. CR848761.1 CR848761.1 4 1 1.000 - - - - - - - -
78. si:dkey-199f5.6 ENSDARG00000094400 51 1 1.000 - - - - - - - - si:dkey-199f5.6 [Source:ZFIN;Acc:ZDB-GENE-100922-107]
79. tecta ENSDARG00000059558 15 1 - 1.000 - - - - - - - tectorin alpha [Source:ZFIN;Acc:ZDB-GENE-110411-120]
80. si:dkey-13n15.2 ENSDARG00000061806, ENSDARG00000094417 4 1 1.000 - - - - - - - - si:dkey-13n15.2 [Source:ZFIN;Acc:ZDB-GENE-060526-209]
81. si:dkey-197d18.1 si:dkey-197d18.1 4 1 1.000 - - - - - - - -
82. TULP2 TULP2 38 1 1.000 - - - - - - - -
83. BX908804.1 ENSDARG00000002797 4 1 1.000 - - - - - - - -
84. Metazoa_SRP_18 Metazoa_SRP_18 4 1 1.000 - - - - - - - -
85. htr1fa ENSDARG00000002773, ENSDARG00000109862 38 0.995 0.995 - - - - - - - - 5-hydroxytryptamine (serotonin) receptor 1Fa [Source:ZFIN;Acc:ZDB-GENE-081105-125]
86. si:ch211-110e4.2 si:ch211-110e4.2 12 0.993 0.993 - - - - - - - -
87. grk7b ENSDARG00000055534 17 0.993 0.993 - - - - - - - - G protein-coupled receptor kinase 7b [Source:ZFIN;Acc:ZDB-GENE-030904-3]
88. gcdhl gcdhl 38 0.993 0.993 - - - - - - - -
89. AP5B1 ENSDARG00000078805 62 0.993 0.993 - - - - - - - - adaptor related protein complex 5 subunit beta 1 [Source:ZFIN;Acc:ZDB-GENE-131121-204]
90. nkx2.3 ENSDARG00000039095, ENSDARG00000113490 493 0.99 0.990 - - - - - - - - NK2 homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-990415-178]
91. cspg5b ENSDARG00000099793 67 0.989 0.989 - - - - - - - - chondroitin sulfate proteoglycan 5b [Source:ZFIN;Acc:ZDB-GENE-060503-368]
92. pms2 ENSDARG00000075672, ENSDARG00000115929 248 0.989 0.989 - - - - - - - - PMS1 homolog 2, mismatch repair system component [Source:ZFIN;Acc:ZDB-GENE-030131-686]
93. f2rl1.1 ENSDARG00000068856 47 0.989 - 0.989 - - - - - - - coagulation factor II (thrombin) receptor-like 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-061215-140]
94. zgc:172106 ENSDARG00000017984 90 0.989 0.989 - - - - - - - - zgc:172106 [Source:ZFIN;Acc:ZDB-GENE-080204-42]
95. FAM163A ENSDARG00000093021 86 0.988 0.988 - - - - - - - - family with sequence similarity 163 member A [Source:HGNC Symbol;Acc:HGNC:28274]
96. eng2a eng2a 186 0.987 0.987 - - - - - - - -
97. dcaf11 ENSDARG00000009868, ENSDARG00000113596 57 0.987 0.987 - - - - - - - - ddb1 and cul4 associated factor 11 [Source:ZFIN;Acc:ZDB-GENE-050809-116]
98. otc ENSDARG00000062147 95 0.987 0.987 - - - - - - - - ornithine carbamoyltransferase [Source:ZFIN;Acc:ZDB-GENE-070912-422]
99. PLLP ENSDARG00000062756, ENSDARG00000109949 114 0.987 0.987 - - - - - - - - plasmolipin [Source:ZFIN;Acc:ZDB-GENE-050419-195]
100. ano9a ENSDARG00000076320, ENSDARG00000078941 865 0.983 - - - - - - 0.983 - - anoctamin 9a [Source:ZFIN;Acc:ZDB-GENE-071004-46]

There are 1116 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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