Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for emx1

Gene Name Gene ID Reads Annotation
emx1 ENSDARG00000039569 787 empty spiracles homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-031007-7]










Genes with expression patterns similar to emx1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. emx1 ENSDARG00000039569 787 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 empty spiracles homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-031007-7]
2. atp1a1a.5 ENSDARG00000040252 90 3.278 - 0.901 - - - 0.861 0.713 - 0.803 ATPase Na+/K+ transporting subunit alpha 1a, tandem duplicate 5 [Source:ZFIN;Acc:ZDB-GENE-020501-1]
3. ponzr1 ENSDARG00000090444 540 3.276 0.818 0.879 - - - 0.776 0.803 - - plac8 onzin related protein 1 [Source:ZFIN;Acc:ZDB-GENE-070727-1]
4. AL928724.1 ENSDARG00000097525 421 3.228 0.922 0.842 - - - 0.712 0.752 - -
5. ca4c ENSDARG00000044512 102 3.131 - 0.822 - - - 0.830 0.725 - 0.754 carbonic anhydrase IV c [Source:ZFIN;Acc:ZDB-GENE-080815-6]
6. atp1a1a.3 ENSDARG00000039131 3267 2.716 - 0.878 - - - 0.895 0.943 - - ATPase Na+/K+ transporting subunit alpha 1a, tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-001212-3]
7. mal 906 2.485 0.771 0.908 - - - - 0.806 - - mal, T-cell differentiation protein
8. slc12a10.3 ENSDARG00000055253 127 2.456 - 0.891 - - - 0.778 - - 0.787 slc12a10.3 solute carrier family 12 (sodium/potassium/chloride transporters), member 10, tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-060503-518]
9. zgc:158222 ENSDARG00000051873, ENSDARG00000112532 642 2.423 - 0.796 - - - 0.726 0.901 - - zgc:158222 [Source:ZFIN;Acc:ZDB-GENE-070112-1522]
10. RBM47 ENSDARG00000061985 2498 2.354 0.731 - - - - 0.826 0.797 - - RNA binding motif protein 47 [Source:ZFIN;Acc:ZDB-GENE-030131-9612]
11. CU596012.2 CU596012.2 1046 2.342 0.784 0.851 - - - - 0.707 - -
12. tmem88b ENSDARG00000069388 501 2.34 0.708 - - - - 0.786 0.846 - - transmembrane protein 88 b [Source:ZFIN;Acc:ZDB-GENE-060929-644]
13. mctp2b ENSDARG00000073970 238 2.319 0.748 0.761 - - - 0.810 - - - multiple C2 domains, transmembrane 2b [Source:ZFIN;Acc:ZDB-GENE-050506-136]
14. foxp1b ENSDARG00000014181 2594 2.297 0.743 0.818 - - - - 0.736 - - forkhead box P1b [Source:ZFIN;Acc:ZDB-GENE-041203-1]
15. si:ch211-207j7.2 ENSDARG00000090793 316 2.292 0.850 0.738 - - - - 0.704 - - si:ch211-207j7.2 [Source:ZFIN;Acc:ZDB-GENE-120215-232]
16. EPS8L3 EPS8L3 111 2.271 0.736 0.762 - - - - 0.773 - -
17. si:dkey-39a18.1 ENSDARG00000045669 599 2.27 - 0.823 - 0.708 - - 0.739 - - si:dkey-39a18.1 [Source:ZFIN;Acc:ZDB-GENE-041210-127]
18. hnf4g ENSDARG00000071565 117 2.221 0.713 0.734 - - - - 0.774 - - hepatocyte nuclear factor 4, gamma [Source:ZFIN;Acc:ZDB-GENE-060929-100]
19. dact2 ENSDARG00000056986 1121 2.171 0.724 0.701 - - - - 0.746 - - dishevelled-binding antagonist of beta-catenin 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9975]
20. cmtm4 ENSDARG00000052020, ENSDARG00000115570 1033 2.128 0.710 0.705 - - - - 0.713 - - CKLF-like MARVEL transmembrane domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-040718-195]
21. gprc5c ENSDARG00000100862 457 1.739 0.889 - - - - - 0.850 - - G protein-coupled receptor, class C, group 5, member C [Source:ZFIN;Acc:ZDB-GENE-070928-27]
22. ndrg1a ENSDARG00000032849 2406 1.735 - 0.805 - - - 0.930 - - - N-myc downstream regulated 1a [Source:ZFIN;Acc:ZDB-GENE-030826-34]
23. elf3 ENSDARG00000077982 211 1.69 - 0.919 - - - - 0.771 - - E74-like factor 3 (ets domain transcription factor, epithelial-specific ) [Source:ZFIN;Acc:ZDB-GENE-030131-8760]
24. cdh17 ENSDARG00000005112 3816 1.687 0.844 0.843 - - - - - - - cadherin 17, LI cadherin (liver-intestine) [Source:ZFIN;Acc:ZDB-GENE-030910-3]
25. EPS8L2 ENSDARG00000058108 484 1.68 - 0.865 - - - 0.815 - - - EPS8 like 2 [Source:ZFIN;Acc:ZDB-GENE-131121-340]
26. CT583700.1 CT583700.1 123 1.661 0.771 - - - - - 0.890 - -
27. slc39a5 ENSDARG00000079525 2157 1.658 - - - - - 0.816 0.842 - - solute carrier family 39 (zinc transporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-060608-1]
28. mavs ENSDARG00000069733 311 1.652 - 0.706 - - - 0.946 - - - mitochondrial antiviral signaling protein [Source:ZFIN;Acc:ZDB-GENE-070112-1402]
29. atp1b1a ENSDARG00000013144 19744 1.644 0.872 - - - - - 0.772 - - ATPase Na+/K+ transporting subunit beta 1a [Source:ZFIN;Acc:ZDB-GENE-001127-3]
30. CR388015.1 CR388015.1 311 1.644 - 0.827 - - - - 0.817 - -
31. tbx2b ENSDARG00000006120, ENSDARG00000116135 1599 1.64 - 0.750 - - - 0.890 - - - T-box 2b [Source:ZFIN;Acc:ZDB-GENE-990726-27]
32. esrrb ENSDARG00000100847 636 1.639 0.878 0.761 - - - - - - - estrogen-related receptor beta [Source:ZFIN;Acc:ZDB-GENE-040616-2]
33. pipox ENSDARG00000055591 260 1.637 - 0.818 - - - 0.819 - - - pipecolic acid oxidase [Source:ZFIN;Acc:ZDB-GENE-110627-2]
34. TRIM35_4 TRIM35_4 63 1.633 - - - - - - 0.916 - 0.717
35. galk1 ENSDARG00000028088 540 1.632 - - - - - 0.779 0.853 - - galactokinase 1 [Source:ZFIN;Acc:ZDB-GENE-041010-79]
36. st3gal3b ENSDARG00000015252 465 1.626 - 0.820 - - - 0.806 - - - ST3 beta-galactoside alpha-2,3-sialyltransferase 3b [Source:ZFIN;Acc:ZDB-GENE-050411-13]
37. tnfrsf21 ENSDARG00000001807 239 1.625 0.773 0.852 - - - - - - - tumor necrosis factor receptor superfamily, member 21 [Source:ZFIN;Acc:ZDB-GENE-030131-5971]
38. sod2 ENSDARG00000042644 1382 1.617 0.746 0.871 - - - - - - - superoxide dismutase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-030131-7742]
39. zgc:64085 zgc:64085 955 1.613 - 0.842 - - - - 0.771 - -
40. c1qtnf9 ENSDARG00000058318, ENSDARG00000112904 1274 1.612 0.819 - - - - - 0.793 - - C1q and TNF related 9 [Source:ZFIN;Acc:ZDB-GENE-080303-33]
41. jam2b ENSDARG00000079071 1031 1.612 - 0.821 - - - - 0.791 - - junctional adhesion molecule 2b [Source:ZFIN;Acc:ZDB-GENE-080229-3]
42. trim24 ENSDARG00000103350 431 1.602 - - - - - 0.737 0.865 - - tripartite motif containing 24 [Source:ZFIN;Acc:ZDB-GENE-030131-5913]
43. slc22a6l ENSDARG00000055523 370 1.593 - - - - - 0.854 0.739 - - solute carrier family 22 (organic anion transporter), member 6, like [Source:ZFIN;Acc:ZDB-GENE-040426-2249]
44. hoxd13a ENSDARG00000059256 1190 1.592 0.773 0.819 - - - - - - - homeobox D13a [Source:ZFIN;Acc:ZDB-GENE-990415-119]
45. si:dkey-100n23.5 ENSDARG00000086911 427 1.591 0.769 0.822 - - - - - - - si:dkey-100n23.5 [Source:ZFIN;Acc:ZDB-GENE-070912-347]
46. zgc:153151 ENSDARG00000069563 126 1.581 - 0.775 - - - 0.806 - - - zgc:153151 [Source:ZFIN;Acc:ZDB-GENE-060825-103]
47. bmp7b ENSDARG00000063230 337 1.579 - 0.770 - - - 0.809 - - - bone morphogenetic protein 7b [Source:ZFIN;Acc:ZDB-GENE-060929-328]
48. zgc:101040 ENSDARG00000005176 369 1.571 0.784 - - - - - 0.787 - - zgc:101040 [Source:ZFIN;Acc:ZDB-GENE-040801-107]
49. galcb ENSDARG00000016474 615 1.565 - 0.780 - - - 0.785 - - - galactosylceramidase b [Source:ZFIN;Acc:ZDB-GENE-040426-2115]
50. OTOP1 ENSDARG00000021566 443 1.565 - 0.784 - - - 0.781 - - - otopetrin 1 [Source:HGNC Symbol;Acc:HGNC:19656]
51. ihha ENSDARG00000058733 241 1.564 - 0.830 - - - 0.734 - - - Indian hedgehog homolog a [Source:ZFIN;Acc:ZDB-GENE-051010-1]
52. clcnk ENSDARG00000022560 355 1.564 - 0.801 - - - - 0.763 - - chloride channel K [Source:ZFIN;Acc:ZDB-GENE-040426-1379]
53. slc9a3.2 ENSDARG00000036722 31 1.563 - 0.790 - - - 0.773 - - - solute carrier family 9, subfamily A (NHE3, cation proton antiporter 3), member 3, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060503-640]
54. bin2a ENSDARG00000003219 1369 1.56 0.777 0.783 - - - - - - - bridging integrator 2a [Source:ZFIN;Acc:ZDB-GENE-041114-126]
55. ca9 ENSDARG00000102300 193 1.559 - 0.828 - - - - 0.731 - - carbonic anhydrase IX [Source:ZFIN;Acc:ZDB-GENE-080818-5]
56. tmx2b ENSDARG00000007786 3151 1.547 0.716 0.831 - - - - - - - thioredoxin-related transmembrane protein 2b [Source:ZFIN;Acc:ZDB-GENE-040625-105]
57. asap2b ENSDARG00000019564 1660 1.545 - 0.765 - - - 0.780 - - - ArfGAP with SH3 domain, ankyrin repeat and PH domain 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5060]
58. hook1 ENSDARG00000042946 452 1.544 - 0.736 - - - - 0.808 - - hook microtubule-tethering protein 1 [Source:ZFIN;Acc:ZDB-GENE-041001-159]
59. aldh1a2 ENSDARG00000053493, ENSDARG00000113122 1679 1.543 - - - - - 0.752 0.791 - - aldehyde dehydrogenase 1 family, member A2 [Source:ZFIN;Acc:ZDB-GENE-011010-3]
60. POLD4 POLD4 626 1.543 - 0.704 - - - 0.839 - - -
61. BX119916.1 BX119916.1 19 1.54 - 0.777 - - - - 0.763 - -
62. GCNT7 ENSDARG00000040608 91 1.537 0.787 - - - - - 0.750 - - glucosaminyl (N-acetyl) transferase family member 7 [Source:ZFIN;Acc:ZDB-GENE-120919-3]
63. alox5 alox5 406 1.536 - 0.743 - - - 0.793 - - -
64. CT027762.3_1 CT027762.3_1 62 1.534 0.704 0.830 - - - - - - -
65. FP236810.2 ENSDARG00000113218 140 1.521 0.762 - - - - 0.759 - - - UDP-glucuronosyltransferase 2B20-like [Source:NCBI gene;Acc:571561]
66. tiam1a ENSDARG00000078430 2482 1.518 - - - - - 0.740 0.778 - - T cell lymphoma invasion and metastasis 1a [Source:ZFIN;Acc:ZDB-GENE-080325-1]
67. PIK3R6 PIK3R6 149 1.512 0.746 0.766 - - - - - - -
68. hnf1ba ENSDARG00000006615, ENSDARG00000115522 1124 1.509 - 0.750 - - - - 0.759 - - HNF1 homeobox Ba [Source:ZFIN;Acc:ZDB-GENE-020104-1]
69. pax8 ENSDARG00000015879 368 1.506 - - - 0.703 - 0.803 - - - paired box 8 [Source:ZFIN;Acc:ZDB-GENE-001030-3]
70. ctps1a ENSDARG00000030700 3868 1.502 - - - - - 0.708 0.794 - - CTP synthase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-808]
71. cldnh ENSDARG00000069503 2410 1.501 - 0.780 - - - - 0.721 - - claudin h [Source:ZFIN;Acc:ZDB-GENE-010328-8]
72. hoxc12a ENSDARG00000070352 7409 1.495 - - - - - 0.702 0.793 - - homeobox C12a [Source:ZFIN;Acc:ZDB-GENE-000822-6]
73. wdr65 wdr65 251 1.494 0.710 0.784 - - - - - - -
74. tnfaip8l3 ENSDARG00000088709 345 1.494 0.728 0.766 - - - - - - - tumor necrosis factor, alpha-induced protein 8-like 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1313]
75. trim25 ENSDARG00000104396, ENSDARG00000110468, ENSDARG00000117057 262 1.492 - 0.764 - - - 0.728 - - - tripartite motif containing 25 [Source:ZFIN;Acc:ZDB-GENE-040426-797]
76. lad1 ENSDARG00000022698 127 1.49 0.772 0.718 - - - - - - - ladinin [Source:ZFIN;Acc:ZDB-GENE-030616-268]
77. stat4 ENSDARG00000028731 146 1.49 - - - - - 0.769 0.721 - - signal transducer and activator of transcription 4 [Source:ZFIN;Acc:ZDB-GENE-030616-264]
78. pck1 ENSDARG00000013522 1657 1.488 - - - - - 0.766 0.722 - - phosphoenolpyruvate carboxykinase 1 (soluble) [Source:ZFIN;Acc:ZDB-GENE-030909-11]
79. tmem72 ENSDARG00000069332 19 1.486 - 0.717 - - - - 0.769 - - transmembrane protein 72 [Source:ZFIN;Acc:ZDB-GENE-090313-175]
80. ugt2b5 ugt2b5 17 1.48 - - - - - 0.762 0.718 - -
81. foxi3a ENSDARG00000055926 749 1.476 - - - - - 0.705 0.771 - - forkhead box I3a [Source:ZFIN;Acc:ZDB-GENE-031126-3]
82. zgc:194930 ENSDARG00000079584 326 1.475 0.730 - - - - - 0.745 - - zgc:194930 [Source:ZFIN;Acc:ZDB-GENE-081022-166]
83. AKR1C1 AKR1C1 32 1.471 - - - - - 0.745 0.726 - -
84. eps8l3 eps8l3 144 1.469 - 0.744 - - - - 0.725 - -
85. ical1 ENSDARG00000057688 357 1.466 - 0.720 - - - - 0.746 - - islet cell autoantigen 1-like [Source:ZFIN;Acc:ZDB-GENE-030910-4]
86. rit1 ENSDARG00000069150 520 1.465 - 0.761 - - - 0.704 - - - Ras-like without CAAX 1 [Source:ZFIN;Acc:ZDB-GENE-070912-329]
87. tekt2 ENSDARG00000028973 160 1.46 0.758 - - - - - 0.702 - - tektin 2 (testicular) [Source:ZFIN;Acc:ZDB-GENE-040113-1]
88. usp44 ENSDARG00000089861 1532 1.455 - 0.742 - - - 0.713 - - - ubiquitin specific peptidase 44 [Source:ZFIN;Acc:ZDB-GENE-040426-774]
89. ch1073-291c23.1 2426 1.45 - 0.715 - - - - 0.735 - - ch1073-291c23.1, transcript variant X6
90. si:ch211-89f7.1 si:ch211-89f7.1 699 1.443 - 0.703 - - - - 0.740 - -
91. bckdk ENSDARG00000016904 3775 1.442 - 0.723 - - - - 0.719 - - branched chain ketoacid dehydrogenase kinase [Source:ZFIN;Acc:ZDB-GENE-021204-1]
92. atp6v1ba ENSDARG00000013443, ENSDARG00000111525 6645 1.441 - - - - - 0.733 0.708 - - ATPase, H+ transporting, lysosomal, V1 subunit B, member a [Source:ZFIN;Acc:ZDB-GENE-030711-3]
93. SLC27A2_1 SLC27A2_1 974 1.437 - - - - - 0.706 0.731 - -
94. NOTUM NOTUM 232 1.43 - - - - - 0.707 0.723 - -
95. pdxka ENSDARG00000088959 217 1.426 - - - - - 0.712 0.714 - - pyridoxal (pyridoxine, vitamin B6) kinase a [Source:ZFIN;Acc:ZDB-GENE-030131-8376]
96. sema6d ENSDARG00000002748 133 1.405 0.704 0.701 - - - - - - - sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D [Source:ZFIN;Acc:ZDB-GENE-040426-1933]
97. hsd20b2 ENSDARG00000031336, ENSDARG00000111087 246 0.95 - 0.950 - - - - - - - hydroxysteroid (20-beta) dehydrogenase 2 [Source:ZFIN;Acc:ZDB-GENE-030804-21]
98. hpcal4 ENSDARG00000070491 365 0.947 - 0.947 - - - - - - - hippocalcin like 4 [Source:ZFIN;Acc:ZDB-GENE-060503-307]
99. calm3a ENSDARG00000015050, ENSDARG00000100825 1817 0.925 - 0.925 - - - - - - - calmodulin 3a (phosphorylase kinase, delta) [Source:ZFIN;Acc:ZDB-GENE-030131-5590]
100. gna15.1 ENSDARG00000016364 754 0.916 - 0.916 - - - - - - - guanine nucleotide binding protein (G protein), alpha 15 (Gq class), tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-040801-146]

There are 1096 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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