Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for emp1

Gene Name Gene ID Reads Annotation
emp1 ENSDARG00000069632 251 epithelial membrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-070822-2]










Genes with expression patterns similar to emp1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. emp1 ENSDARG00000069632 251 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 epithelial membrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-070822-2]
2. sh3gl2 sh3gl2 1305 2.547 - - - - 0.744 0.917 0.886 - -
3. sypa ENSDARG00000042974, ENSDARG00000110528 3217 2.53 - 0.704 - - - 0.955 0.871 - - synaptophysin a [Source:ZFIN;Acc:ZDB-GENE-031104-2]
4. stmn4l ENSDARG00000043932 654 2.505 - 0.777 - - - 0.880 0.848 - - stathmin-like 4, like [Source:ZFIN;Acc:ZDB-GENE-040718-301]
5. TUBB2A TUBB2A 142 2.497 - - - - 0.822 0.913 0.762 - -
6. spock2 ENSDARG00000075393 791 2.472 - - - 0.707 - 0.953 0.812 - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 2 [Source:ZFIN;Acc:ZDB-GENE-090312-170]
7. mllt11 ENSDARG00000071026 2518 2.469 - 0.769 - - - 0.925 0.775 - - MLLT11, transcription factor 7 cofactor [Source:ZFIN;Acc:ZDB-GENE-030131-3007]
8. vsnl1b ENSDARG00000044053 1120 2.453 - 0.772 - - - 0.790 0.891 - - visinin-like 1b [Source:ZFIN;Acc:ZDB-GENE-080225-39]
9. KIF26A KIF26A 1077 2.373 0.763 0.804 - - - 0.806 - - -
10. atp6ap1a ENSDARG00000041417 898 2.349 - 0.717 - - - 0.908 0.724 - - ATPase H+ transporting accessory protein 1a [Source:ZFIN;Acc:ZDB-GENE-090312-136]
11. lhx5 ENSDARG00000057936 785 1.901 - - - - - 0.963 0.938 - - LIM homeobox 5 [Source:ZFIN;Acc:ZDB-GENE-980526-484]
12. LINGO2 LINGO2 300 1.877 - - - - - 0.914 0.963 - -
13. sncgb ENSDARG00000109715 1014 1.866 - - - - - 0.943 0.923 - - synuclein, gamma b (breast cancer-specific protein 1) [Source:ZFIN;Acc:ZDB-GENE-050522-235]
14. SV2B SV2B 208 1.858 - - - - - 0.925 0.933 - -
15. stxbp1a ENSDARG00000001994 5154 1.846 - - - - - 0.965 0.881 - - syntaxin binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-050626-106]
16. slc6a5_1 ENSDARG00000067964, ENSDARG00000111378 1111 1.842 - - - - - 0.929 0.913 - - solute carrier family 6 (neurotransmitter transporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-050105-2]
17. pcsk1nl ENSDARG00000076170 1232 1.842 - - - - - 0.950 0.892 - - proprotein convertase subtilisin/kexin type 1 inhibitor, like [Source:ZFIN;Acc:ZDB-GENE-090427-2]
18. AKT3 AKT3 1729 1.839 - - - - - 0.920 0.919 - -
19. sez6l2 ENSDARG00000076052 360 1.838 - - - - - 0.958 0.880 - - seizure related 6 homolog (mouse)-like 2 [Source:ZFIN;Acc:ZDB-GENE-091204-189]
20. SEMA7A ENSDARG00000078707 465 1.837 - - - - - 0.938 0.899 - - semaphorin 7A [Source:ZFIN;Acc:ZDB-GENE-030131-3633]
21. mir34 176 1.836 - - - - - 0.920 0.916 - - microRNA 34
22. nexmifb ENSDARG00000029296 416 1.832 - - - - - 0.889 0.943 - - neurite extension and migration factor b [Source:ZFIN;Acc:ZDB-GENE-140106-18]
23. BX957337.1 BX957337.1 1685 1.832 - - - - - 0.954 0.878 - -
24. napg napg 645 1.832 - - - - - 0.874 0.958 - -
25. ANKRD13D ENSDARG00000098140 88 1.825 - - - - 0.906 - 0.919 - - ankyrin repeat domain 13 family, member D [Source:ZFIN;Acc:ZDB-GENE-101007-3]
26. st8sia5 ENSDARG00000036584 529 1.825 - - - - - 0.940 0.885 - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5 [Source:ZFIN;Acc:ZDB-GENE-060322-8]
27. C19H7orf41 C19H7orf41 2243 1.815 - - - - - 0.923 0.892 - -
28. TPPP2 ENSDARG00000035338, ENSDARG00000113727 298 1.813 - - - - - 0.937 0.876 - - tubulin polymerization-promoting protein family member 2 [Source:ZFIN;Acc:ZDB-GENE-140106-24]
29. TUSC5 TUSC5 1436 1.813 - - - - - 0.961 0.852 - -
30. rdh12 ENSDARG00000018069 396 1.81 - - - - - 0.867 0.943 - - retinol dehydrogenase 12 [Source:ZFIN;Acc:ZDB-GENE-040718-9]
31. TUBB8P7_1 TUBB8P7_1 2722 1.808 - - - - - 0.906 0.902 - -
32. stmn2a ENSDARG00000033234 2272 1.807 - - - - - 0.949 0.858 - - stathmin 2a [Source:ZFIN;Acc:ZDB-GENE-041010-85]
33. necap1 ENSDARG00000020798 612 1.807 - - - - - 0.941 0.866 - - NECAP endocytosis associated 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1682]
34. cadm3 ENSDARG00000057013 1545 1.806 - - - - - 0.921 0.885 - - cell adhesion molecule 3 [Source:ZFIN;Acc:ZDB-GENE-060512-196]
35. nkx1.2lb ENSDARG00000099427 220 1.805 - - - - - 0.900 0.905 - - NK1 transcription factor related 2-like,b [Source:ZFIN;Acc:ZDB-GENE-040615-2]
36. TTBK1_1 TTBK1_1 132 1.804 - - - - 0.901 0.903 - - -
37. SNAP91 ENSDARG00000098809 556 1.804 - - - - - 0.896 0.908 - - synaptosomal-associated protein 91 [Source:ZFIN;Acc:ZDB-GENE-100422-6]
38. stmn1b ENSDARG00000033655 9491 1.802 - - - - - 0.964 0.838 - - stathmin 1b [Source:ZFIN;Acc:ZDB-GENE-050417-397]
39. pnoca ENSDARG00000025024 467 1.799 - - - - - 0.915 0.884 - - prepronociceptin a [Source:ZFIN;Acc:ZDB-GENE-101229-1]
40. cers6 ENSDARG00000053583 247 1.797 - - - - - 0.936 0.861 - - ceramide synthase 6 [Source:ZFIN;Acc:ZDB-GENE-070522-1]
41. syn2a ENSDARG00000045945 434 1.797 - - - - - 0.900 0.897 - - synapsin IIa [Source:ZFIN;Acc:ZDB-GENE-040718-341]
42. phyhipla ENSDARG00000003998, ENSDARG00000115785 262 1.795 - - - - - 0.911 0.884 - - phytanoyl-CoA 2-hydroxylase interacting protein-like a [Source:ZFIN;Acc:ZDB-GENE-061215-64]
43. rab3ab ENSDARG00000043835 1267 1.795 - - - - - 0.906 0.889 - - RAB3A, member RAS oncogene family, b [Source:ZFIN;Acc:ZDB-GENE-041210-268]
44. snap25a ENSDARG00000020609 4537 1.794 - - - - - 0.912 0.882 - - synaptosomal-associated protein, 25a [Source:ZFIN;Acc:ZDB-GENE-980526-468]
45. ROBO3_1 ROBO3_1 468 1.79 - - - - - 0.957 0.833 - -
46. nxph1 ENSDARG00000033447 182 1.788 - - - - - 0.890 0.898 - - neurexophilin 1 [Source:ZFIN;Acc:ZDB-GENE-040718-231]
47. vsnl1a ENSDARG00000023228 1584 1.787 - - - - - 0.954 0.833 - - visinin-like 1a [Source:ZFIN;Acc:ZDB-GENE-041001-211]
48. dmrt3a ENSDARG00000035290, ENSDARG00000114587 115 1.785 - - - - - 0.893 0.892 - - doublesex and mab-3 related transcription factor 3a [Source:ZFIN;Acc:ZDB-GENE-021220-3]
49. MAP1A MAP1A 847 1.785 - - - - - 0.914 0.871 - -
50. mapk12b ENSDARG00000006409 2246 1.785 - - - - - 0.941 0.844 - - mitogen-activated protein kinase 12b [Source:ZFIN;Acc:ZDB-GENE-041210-123]
51. dpysl5a ENSDARG00000011141 1827 1.783 - - - - - 0.914 0.869 - - dihydropyrimidinase-like 5a [Source:ZFIN;Acc:ZDB-GENE-030131-3136]
52. calb2a ENSDARG00000041062, ENSDARG00000110220 459 1.781 - - - - - 0.896 0.885 - - calbindin 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1677]
53. TMEM57 TMEM57 260 1.78 - - - - - 0.842 0.938 - -
54. CABZ01065506.1 CABZ01065506.1 204 1.779 - - - - - 0.920 0.859 - -
55. tuba1c ENSDARG00000055216 8384 1.779 - - - - - 0.900 0.879 - - tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
56. aldocb ENSDARG00000019702 2111 1.779 - - - - - 0.906 0.873 - - aldolase C, fructose-bisphosphate, b [Source:ZFIN;Acc:ZDB-GENE-030821-1]
57. cacng8b ENSDARG00000070626 176 1.778 - - - - - 0.855 0.923 - - calcium channel, voltage-dependent, gamma subunit 8b [Source:ZFIN;Acc:ZDB-GENE-100921-72]
58. acbd4 ENSDARG00000027070 52 1.778 0.862 - - - - - 0.916 - - acyl-CoA binding domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2074]
59. LRFN2 118 1.778 - - - - - 0.925 0.853 - - leucine rich repeat and fibronectin type III domain containing 2
60. tuba2 ENSDARG00000045014 1490 1.777 - - - - - 0.937 0.840 - - tubulin, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1970]
61. slc32a1 ENSDARG00000059775 1092 1.777 - - - - - 0.912 0.865 - - solute carrier family 32 (GABA vesicular transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-061201-1]
62. cnrip1a ENSDARG00000091683 1491 1.776 - - - - - 0.937 0.839 - - cannabinoid receptor interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-040801-126]
63. bsk146 ENSDARG00000099069 274 1.775 - - - - - 0.907 0.868 - - brain specific kinase 146 [Source:ZFIN;Acc:ZDB-GENE-060313-3]
64. lrrc4.1 ENSDARG00000069402 323 1.773 - - - - - 0.902 0.871 - - leucine rich repeat containing 4.1 [Source:ZFIN;Acc:ZDB-GENE-041210-129]
65. scrt1b ENSDARG00000040214, ENSDARG00000110984 533 1.772 - - - - - 0.945 0.827 - - scratch family zinc finger 1b [Source:ZFIN;Acc:ZDB-GENE-050327-72]
66. pcdh1gc5 ENSDARG00000104826 10052 1.771 - - - - - 0.936 0.835 - - protocadherin 1 gamma c 5 [Source:ZFIN;Acc:ZDB-GENE-041118-16]
67. atcaya ENSDARG00000071678 344 1.771 - - - - - 0.897 0.874 - - ataxia, cerebellar, Cayman type a [Source:ZFIN;Acc:ZDB-GENE-070705-185]
68. nova1 ENSDARG00000020178 4129 1.769 - - - - - 0.890 0.879 - - neuro-oncological ventral antigen 1 [Source:ZFIN;Acc:ZDB-GENE-060526-113]
69. gfap ENSDARG00000025301 5584 1.763 - - - - - 0.883 0.880 - - glial fibrillary acidic protein [Source:ZFIN;Acc:ZDB-GENE-990914-3]
70. otpa ENSDARG00000014201 2290 1.763 - - - - - 0.954 0.809 - - orthopedia homeobox a [Source:ZFIN;Acc:ZDB-GENE-070216-1]
71. mdkb ENSDARG00000020708 5393 1.762 - - - - - 0.951 0.811 - - midkine b [Source:ZFIN;Acc:ZDB-GENE-010131-6]
72. olfm1b ENSDARG00000014053 1392 1.762 - - - - - 0.901 0.861 - - olfactomedin 1b [Source:ZFIN;Acc:ZDB-GENE-040801-228]
73. si:ch211-11c15.3 si:ch211-11c15.3 1279 1.761 - - - - - 0.942 0.819 - -
74. st18 663 1.76 - - - - - 0.958 0.802 - - suppression of tumorigenicity 18, zinc finger
75. slc25a6 ENSDARG00000005853, ENSDARG00000113366 99 1.76 - - - - - 0.931 0.829 - - solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6 [Source:ZFIN;Acc:ZDB-GENE-070912-446]
76. syt11a ENSDARG00000057913 1145 1.76 - - - - - 0.943 0.817 - - synaptotagmin XIa [Source:ZFIN;Acc:ZDB-GENE-040426-2815]
77. kcnc3a ENSDARG00000055855 1821 1.758 - - - - - 0.864 0.894 - - potassium voltage-gated channel, Shaw-related subfamily, member 3a [Source:ZFIN;Acc:ZDB-GENE-100901-1]
78. atp2b3b ENSDARG00000023445 1424 1.757 - - - - - 0.964 0.793 - - ATPase plasma membrane Ca2+ transporting 3b [Source:ZFIN;Acc:ZDB-GENE-080409-2]
79. si:ch73-21g5.7 ENSDARG00000093156 9412 1.755 - - - - - 0.924 0.831 - - si:ch73-21g5.7 [Source:ZFIN;Acc:ZDB-GENE-081104-260]
80. atp6v1b2 ENSDARG00000043465, ENSDARG00000113422 682 1.754 - - - - - 0.890 0.864 - - ATPase H+ transporting V1 subunit B2 [Source:ZFIN;Acc:ZDB-GENE-030711-4]
81. stx1b ENSDARG00000000503 2724 1.754 - - - - - 0.862 0.892 - - syntaxin 1B [Source:ZFIN;Acc:ZDB-GENE-000330-4]
82. scrt2 ENSDARG00000056175 4331 1.753 - - - - - 0.924 0.829 - - scratch family zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4097]
83. pcbp3 ENSDARG00000054378 74 1.752 - - - - - 0.817 0.935 - - poly(rC) binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-050522-157]
84. nrxn1a ENSDARG00000061647, ENSDARG00000111866 1069 1.751 - - - - - 0.938 0.813 - - neurexin 1a [Source:ZFIN;Acc:ZDB-GENE-070206-1]
85. upf3a ENSDARG00000069297, ENSDARG00000111067 196 1.75 - - - - - 0.886 0.864 - - UPF3A, regulator of nonsense mediated mRNA decay [Source:ZFIN;Acc:ZDB-GENE-060721-2]
86. cbln5 ENSDARG00000053802, ENSDARG00000110017 50 1.75 0.831 0.919 - - - - - - - cerebellin 5 [Source:ZFIN;Acc:ZDB-GENE-070912-577]
87. VSTM2B VSTM2B 149 1.75 - - - - - 0.901 0.849 - -
88. camta1a ENSDARG00000077428, ENSDARG00000116922 176 1.748 - - - - - 0.910 0.838 - - calmodulin binding transcription activator 1a [Source:ZFIN;Acc:ZDB-GENE-090312-183]
89. lrp11 ENSDARG00000034076 313 1.747 - - - - - 0.889 0.858 - - low density lipoprotein receptor-related protein 11 [Source:ZFIN;Acc:ZDB-GENE-030131-7847]
90. lingo1a ENSDARG00000034165 179 1.747 - - - - - 0.896 0.851 - - leucine rich repeat and Ig domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-080327-16]
91. scn8ab ENSDARG00000018032, ENSDARG00000112543 883 1.746 - - - - - 0.861 0.885 - - sodium channel, voltage gated, type VIII, alpha subunit b [Source:ZFIN;Acc:ZDB-GENE-060906-2]
92. CACFD1 ENSDARG00000090818 1298 1.746 - - - - - 0.941 0.805 - - calcium channel flower domain containing 1 [Source:HGNC Symbol;Acc:HGNC:1365]
93. dnajc6 ENSDARG00000079891 438 1.743 - - - - - 0.899 0.844 - - DnaJ (Hsp40) homolog, subfamily C, member 6 [Source:ZFIN;Acc:ZDB-GENE-080104-2]
94. ttll7 ENSDARG00000062973 519 1.743 - - - - - 0.921 0.822 - - tubulin tyrosine ligase-like family, member 7 [Source:ZFIN;Acc:ZDB-GENE-070112-2112]
95. ppp3ca ENSDARG00000004988 615 1.743 - - - - - 0.918 0.825 - - protein phosphatase 3, catalytic subunit, alpha isozyme [Source:ZFIN;Acc:ZDB-GENE-091113-24]
96. hpca ENSDARG00000018397, ENSDARG00000110115 3866 1.742 - - - - - 0.959 0.783 - - hippocalcin [Source:ZFIN;Acc:ZDB-GENE-040426-1683]
97. notch1b ENSDARG00000052094 7874 1.74 - - - - - 0.913 0.827 - - notch 1b [Source:ZFIN;Acc:ZDB-GENE-990415-183]
98. atp2b3a ENSDARG00000043474, ENSDARG00000112865 914 1.739 - - - - - 0.913 0.826 - - ATPase plasma membrane Ca2+ transporting 3a [Source:ZFIN;Acc:ZDB-GENE-040718-174]
99. hmp19 2554 1.739 - - - - - 0.914 0.825 - - HMP19 protein
100. mamdc1 mamdc1 156 1.738 - - - - 0.902 0.836 - - -

There are 2197 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA