Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for emd

Gene Name Gene ID Reads Annotation
emd ENSDARG00000095774, ENSDARG00000114017 1640 emerin (Emery-Dreifuss muscular dystrophy) [Source:ZFIN;Acc:ZDB-GENE-070501-2]










Genes with expression patterns similar to emd

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. emd ENSDARG00000095774, ENSDARG00000114017 1640 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 emerin (Emery-Dreifuss muscular dystrophy) [Source:ZFIN;Acc:ZDB-GENE-070501-2]
2. nrp1a ENSDARG00000102153 4154 2.536 - 0.951 - - 0.829 - 0.756 - - neuropilin 1a [Source:ZFIN;Acc:ZDB-GENE-030519-2]
3. C3H16orf89 C3H16orf89 449 1.947 - 0.968 - - 0.979 - - - -
4. vgll4b ENSDARG00000103730 5266 1.893 - 0.936 - - 0.957 - - - - vestigial-like family member 4b [Source:ZFIN;Acc:ZDB-GENE-040426-2445]
5. slc35c2 ENSDARG00000037517, ENSDARG00000114428 3644 1.893 - 0.943 - - 0.950 - - - - solute carrier family 35 (GDP-fucose transporter), member C2 [Source:ZFIN;Acc:ZDB-GENE-030131-2202]
6. nup62l ENSDARG00000020527, ENSDARG00000111836, ENSDARG00000112620 3763 1.876 - 0.939 - - 0.937 - - - - nucleoporin 62 like [Source:ZFIN;Acc:ZDB-GENE-030131-8491]
7. aip ENSDARG00000104437 3574 1.782 - - - - 0.941 - 0.841 - - aryl hydrocarbon receptor interacting protein [Source:ZFIN;Acc:ZDB-GENE-030131-6735]
8. lsm4 ENSDARG00000023852 6083 1.781 - 0.876 - - 0.905 - - - - LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:ZFIN;Acc:ZDB-GENE-040426-1652]
9. prickle1b ENSDARG00000045694 7536 1.759 - 0.924 - - - 0.835 - - - prickle homolog 1b [Source:ZFIN;Acc:ZDB-GENE-030131-2152]
10. grb2b ENSDARG00000038059 9050 1.758 - - - - 0.943 - 0.815 - - growth factor receptor-bound protein 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1975]
11. arg2 ENSDARG00000039269 571 1.741 - 0.979 - - - 0.762 - - - arginase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1334]
12. selenbp1 ENSDARG00000024717, ENSDARG00000112316 1407 1.74 - 0.944 - - - 0.796 - - - selenium binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1436]
13. mtm1 ENSDARG00000037560 1086 1.732 - 0.973 - - - 0.759 - - - myotubularin 1 [Source:ZFIN;Acc:ZDB-GENE-051113-128]
14. Sep-02 Sep-02 10074 1.723 - 0.802 - - 0.921 - - - -
15. fhl1b ENSDARG00000056653 577 1.717 - 0.957 - - - - 0.760 - - four and a half LIM domains 1b [Source:ZFIN;Acc:ZDB-GENE-031219-1]
16. bin2b ENSDARG00000010255 2649 1.715 - - - - 0.978 0.737 - - - bridging integrator 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5598]
17. SYS1 ENSDARG00000017606 1369 1.71 - 0.987 - - - - - 0.723 - Sys1 golgi trafficking protein [Source:ZFIN;Acc:ZDB-GENE-030131-8283]
18. ppa1b ENSDARG00000030441 9027 1.706 - 0.829 - - 0.877 - - - - pyrophosphatase (inorganic) 1b [Source:ZFIN;Acc:ZDB-GENE-050417-375]
19. arglu1a ENSDARG00000019223 8716 1.705 - - - - 0.943 - 0.762 - - arginine and glutamate rich 1a [Source:ZFIN;Acc:ZDB-GENE-040426-2914]
20. gnptab ENSDARG00000030153 559 1.702 - 0.985 - - - 0.717 - - - N-acetylglucosamine-1-phosphate transferase subunits alpha and beta [Source:ZFIN;Acc:ZDB-GENE-030131-4714]
21. zgc:101559 ENSDARG00000003257, ENSDARG00000112139, ENSDARG00000112819, ENSDARG00000115491 751 1.694 0.710 0.984 - - - - - - - zgc:101559 [Source:ZFIN;Acc:ZDB-GENE-041114-122]
22. ARF5 ENSDARG00000070472, ENSDARG00000115687 6101 1.693 - - - - 0.951 0.742 - - - ADP-ribosylation factor 5 [Source:ZFIN;Acc:ZDB-GENE-030910-5]
23. arid4a ENSDARG00000043873 4176 1.692 - 0.957 - - - - 0.735 - - AT rich interactive domain 4A (RBP1-like) [Source:ZFIN;Acc:ZDB-GENE-050809-105]
24. btr12 ENSDARG00000051809 1804 1.689 - 0.946 - - - 0.743 - - - bloodthirsty-related gene family, member 12 [Source:ZFIN;Acc:ZDB-GENE-060929-548]
25. errfi1 errfi1 979 1.686 - - - - 0.979 0.707 - - -
26. sash1a ENSDARG00000007179 2497 1.683 - 0.963 - - - - 0.720 - - SAM and SH3 domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9960]
27. hddc2 ENSDARG00000034957 905 1.679 - 0.944 - - - 0.735 - - - HD domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-050522-394]
28. si:dkey-147f3.4_1 ENSDARG00000071029, ENSDARG00000092077 2259 1.672 - 0.965 - - - - 0.707 - - si:dkey-147f3.4 [Source:ZFIN;Acc:ZDB-GENE-061009-29]
29. CABZ01059390.1 CABZ01059390.1 4340 1.657 - - - - 0.933 0.724 - - -
30. serpina1l ENSDARG00000090850 10625 1.627 - - - - 0.888 0.739 - - - serine (or cysteine) proteinase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1, like [Source:ZFIN;Acc:ZDB-GENE-040721-3]
31. ppifb ENSDARG00000052842 3533 1.612 - 0.881 - - - 0.731 - - - peptidylprolyl isomerase Fb [Source:ZFIN;Acc:ZDB-GENE-051030-126]
32. fbn2b ENSDARG00000098237 10835 1.592 - 0.881 - - - 0.711 - - - fibrillin 2b [Source:ZFIN;Acc:ZDB-GENE-090112-3]
33. pik3r3a ENSDARG00000103038 1132 1.592 - - - - - 0.757 0.835 - - phosphoinositide-3-kinase, regulatory subunit 3a (gamma) [Source:ZFIN;Acc:ZDB-GENE-040426-1978]
34. si:dkey-117n7.3 ENSDARG00000092944 2518 1.562 - 0.840 - - - - 0.722 - - si:dkey-117n7.3 [Source:ZFIN;Acc:ZDB-GENE-060503-143]
35. nrp2a_1 ENSDARG00000096546 3358 1.518 - - - - - 0.773 0.745 - - neuropilin 2a [Source:ZFIN;Acc:ZDB-GENE-040611-2]
36. FBXW12 FBXW12 658 0.986 - 0.986 - - - - - - -
37. iars2 ENSDARG00000044134 1990 0.986 - - - - 0.986 - - - - isoleucyl-tRNA synthetase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-030616-608]
38. rfc5 ENSDARG00000035634 974 0.986 - - - - 0.986 - - - - replication factor C (activator 1) 5 [Source:ZFIN;Acc:ZDB-GENE-040907-1]
39. pbk ENSDARG00000007221 1211 0.985 - 0.985 - - - - - - - PDZ binding kinase [Source:ZFIN;Acc:ZDB-GENE-030523-2]
40. ppip5k2 ENSDARG00000078441 1074 0.985 - - - - 0.985 - - - - diphosphoinositol pentakisphosphate kinase 2 [Source:ZFIN;Acc:ZDB-GENE-091204-125]
41. zdhhc9 ENSDARG00000060515 981 0.985 - - - - 0.985 - - - - zinc finger, DHHC-type containing 9 [Source:ZFIN;Acc:ZDB-GENE-071004-8]
42. BTBD2 BTBD2 610 0.985 - 0.985 - - - - - - -
43. DENND4B ENSDARG00000102914 1001 0.984 - - - - 0.984 - - - - DENN/MADD domain containing 4B [Source:ZFIN;Acc:ZDB-GENE-130530-684]
44. mios ENSDARG00000102587 684 0.984 - 0.984 - - - - - - - missing oocyte, meiosis regulator, homolog (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040426-856]
45. tpt1 ENSDARG00000092693 1110 0.983 - - - - 0.983 - - - - tumor protein, translationally-controlled 1 [Source:ZFIN;Acc:ZDB-GENE-990603-10]
46. nfe2l2a ENSDARG00000042824 1707 0.983 - 0.983 - - - - - - - nuclear factor, erythroid 2-like 2a [Source:ZFIN;Acc:ZDB-GENE-030723-2]
47. galnt7 ENSDARG00000057303 2017 0.983 - - - - 0.983 - - - - UDP-N-acetyl-alpha-D-galactosamine: polypeptide N-acetylgalactosaminyltransferase 7 [Source:ZFIN;Acc:ZDB-GENE-050522-284]
48. RNF214 RNF214 816 0.982 - - - - 0.982 - - - -
49. acbd6 ENSDARG00000039456 2355 0.982 - - - - 0.982 - - - - acyl-CoA binding domain containing 6 [Source:ZFIN;Acc:ZDB-GENE-030131-2810]
50. slc9a3r1 slc9a3r1 743 0.982 - - - - 0.982 - - - -
51. zgc:173990 zgc:173990 161 0.982 - 0.982 - - - - - - -
52. taf1a ENSDARG00000052471 252 0.981 - 0.981 - - - - - - - TATA box binding protein (TBP)-associated factor, RNA polymerase I, A [Source:ZFIN;Acc:ZDB-GENE-041014-272]
53. ABI3_1 ABI3_1 511 0.981 - 0.981 - - - - - - -
54. ik ENSDARG00000004161 3132 0.981 - 0.981 - - - - - - - IK cytokine [Source:ZFIN;Acc:ZDB-GENE-030131-960]
55. rab8a ENSDARG00000067920 975 0.981 - 0.981 - - - - - - - RAB8A, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-070424-36]
56. rnft1 ENSDARG00000015917, ENSDARG00000116783 1197 0.981 - 0.981 - - - - - - - ring finger protein, transmembrane 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2324]
57. smim7 ENSDARG00000074848 1260 0.981 - - - - 0.981 - - - - small integral membrane protein 7 [Source:ZFIN;Acc:ZDB-GENE-060810-180]
58. wdr43 ENSDARG00000077264 1992 0.981 - - - - 0.981 - - - - WD repeat domain 43 [Source:ZFIN;Acc:ZDB-GENE-021231-3]
59. si:dkey-239h2.3 ENSDARG00000092033 398 0.981 - 0.981 - - - - - - - si:dkey-239h2.3 [Source:ZFIN;Acc:ZDB-GENE-081104-383]
60. zgc:101663 ENSDARG00000037852 830 0.98 - 0.980 - - - - - - - zgc:101663 [Source:ZFIN;Acc:ZDB-GENE-041114-149]
61. si:dkey-70e17.2 si:dkey-70e17.2 371 0.98 - - - - 0.980 - - - -
62. sema3fa ENSDARG00000011163 759 0.98 - - - - 0.980 - - - - sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Fa [Source:ZFIN;Acc:ZDB-GENE-050513-1]
63. si:dkey-114e9.1 si:dkey-114e9.1 233 0.98 - - - - 0.980 - - - -
64. mtmr7b ENSDARG00000070412, ENSDARG00000112046 724 0.98 - 0.980 - - - - - - - myotubularin related protein 7b [Source:ZFIN;Acc:ZDB-GENE-050913-66]
65. CABZ01073954.1 CABZ01073954.1 258 0.98 - - - - 0.980 - - - -
66. slc46a1 ENSDARG00000026149 297 0.979 - - - - 0.979 - - - - solute carrier family 46 (folate transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1012]
67. synm ENSDARG00000062350, ENSDARG00000113948, ENSDARG00000114029 483 0.979 - - - - 0.979 - - - - synemin, intermediate filament protein [Source:ZFIN;Acc:ZDB-GENE-050419-81]
68. kcnq5a ENSDARG00000069954 492 0.979 - - - - 0.979 - - - - potassium voltage-gated channel, KQT-like subfamily, member 5a [Source:ZFIN;Acc:ZDB-GENE-090312-185]
69. pbx1a ENSDARG00000100494 854 0.979 - - - - 0.979 - - - - pre-B-cell leukemia homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-000405-1]
70. CR361563.1 CR361563.1 1355 0.979 - - - - 0.979 - - - -
71. nrg2a ENSDARG00000077818 854 0.979 - - - - 0.979 - - - - neuregulin 2a [Source:ZFIN;Acc:ZDB-GENE-070615-10]
72. flot2b ENSDARG00000069774 2831 0.979 - 0.979 - - - - - - - flotillin 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1368]
73. tmem234 ENSDARG00000078333 488 0.979 - - - - 0.979 - - - - transmembrane protein 234 [Source:ZFIN;Acc:ZDB-GENE-090313-326]
74. ARID3A ENSDARG00000070843 1613 0.979 - - - - 0.979 - - - - AT rich interactive domain 3A (BRIGHT-like) [Source:ZFIN;Acc:ZDB-GENE-140106-97]
75. slc4a2b ENSDARG00000052330 1900 0.978 - - - - 0.978 - - - - solute carrier family 4 (anion exchanger), member 2b [Source:ZFIN;Acc:ZDB-GENE-030429-14]
76. MGST1 MGST1 1958 0.978 - 0.978 - - - - - - -
77. si:dkey-30k6.5 ENSDARG00000057238 617 0.978 - - - - 0.978 - - - - si:dkey-30k6.5 [Source:ZFIN;Acc:ZDB-GENE-091204-299]
78. skia ENSDARG00000042151 1850 0.978 - 0.978 - - - - - - - v-ski avian sarcoma viral oncogene homolog a [Source:ZFIN;Acc:ZDB-GENE-990715-9]
79. trim24 ENSDARG00000103350 431 0.978 - - - - 0.978 - - - - tripartite motif containing 24 [Source:ZFIN;Acc:ZDB-GENE-030131-5913]
80. vldlr ENSDARG00000006257 772 0.978 - - - - 0.978 - - - - very low density lipoprotein receptor [Source:ZFIN;Acc:ZDB-GENE-040426-803]
81. git2b ENSDARG00000042791, ENSDARG00000111846 1332 0.978 - - - - 0.978 - - - - G protein-coupled receptor kinase interacting ArfGAP 2b [Source:ZFIN;Acc:ZDB-GENE-070112-2192]
82. trpc4apa ENSDARG00000018840 2543 0.977 - - - - 0.977 - - - - transient receptor potential cation channel, subfamily C, member 4 associated protein a [Source:ZFIN;Acc:ZDB-GENE-000330-3]
83. srcap ENSDARG00000005236 1740 0.977 - - - - 0.977 - - - - Snf2-related CREBBP activator protein [Source:ZFIN;Acc:ZDB-GENE-041008-127]
84. ttc27 ENSDARG00000007918 1228 0.977 - - - - 0.977 - - - - tetratricopeptide repeat domain 27 [Source:ZFIN;Acc:ZDB-GENE-030102-1]
85. CABZ01072607.1 ENSDARG00000113761 784 0.977 - - - - 0.977 - - - - dynein cytoplasmic 2 heavy chain 1 [Source:NCBI gene;Acc:100332402]
86. tjp3 ENSDARG00000002909 1978 0.977 - 0.977 - - - - - - - tight junction protein 3 [Source:ZFIN;Acc:ZDB-GENE-030828-10]
87. CCDC71 CCDC71 2442 0.977 - - - - 0.977 - - - -
88. acvr2aa ENSDARG00000011188 1454 0.977 - - - - 0.977 - - - - activin A receptor type 2Aa [Source:ZFIN;Acc:ZDB-GENE-980526-227]
89. cisd1 ENSDARG00000079516, ENSDARG00000114546 2677 0.977 - - - - 0.977 - - - - CDGSH iron sulfur domain 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1162]
90. tyw1 ENSDARG00000062987 1759 0.977 - 0.977 - - - - - - - tRNA-yW synthesizing protein 1 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-060929-688]
91. ripk4 ENSDARG00000043211 775 0.977 - - - - 0.977 - - - - receptor-interacting serine-threonine kinase 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2042]
92. elk3 ENSDARG00000018688, ENSDARG00000110853 1108 0.977 - - - - 0.977 - - - - ELK3, ETS-domain protein [Source:ZFIN;Acc:ZDB-GENE-030716-2]
93. gabpb2a ENSDARG00000007943 1570 0.977 - - - - 0.977 - - - - GA binding protein transcription factor subunit beta 2a [Source:ZFIN;Acc:ZDB-GENE-030131-5733]
94. epc1 epc1 1164 0.976 - - - - 0.976 - - - -
95. ERO1LB ERO1LB 1433 0.976 - - - - 0.976 - - - -
96. nfyba ENSDARG00000039185 1804 0.976 - - - - 0.976 - - - - nuclear transcription factor Y, beta a [Source:ZFIN;Acc:ZDB-GENE-050417-13]
97. ifrd1 ENSDARG00000068708 2858 0.976 - - - - 0.976 - - - - interferon-related developmental regulator 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6132]
98. slc48a1b ENSDARG00000026109 1427 0.975 - - - - 0.975 - - - - solute carrier family 48 (heme transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-030131-8226]
99. pds5b ENSDARG00000098897 1732 0.975 - - - - 0.975 - - - - PDS5 cohesin associated factor B [Source:ZFIN;Acc:ZDB-GENE-091217-2]
100. ctdspla ENSDARG00000071673 1447 0.975 - - - - 0.975 - - - - CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like a [Source:ZFIN;Acc:ZDB-GENE-060825-333]

There are 734 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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