Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for emc3

Gene Name Gene ID Reads Annotation
emc3 ENSDARG00000020607 3406 ER membrane protein complex subunit 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2904]










Genes with expression patterns similar to emc3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. emc3 ENSDARG00000020607 3406 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ER membrane protein complex subunit 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2904]
2. ncalda ENSDARG00000070688 5069 3.726 - - 0.936 0.974 - - - 0.971 0.845 neurocalcin delta a [Source:ZFIN;Acc:ZDB-GENE-080220-28]
3. tcf3b ENSDARG00000099999, ENSDARG00000112646 3589 2.78 - - 0.963 0.986 - - - 0.831 - transcription factor 3b [Source:ZFIN;Acc:ZDB-GENE-051113-64]
4. dennd5a ENSDARG00000017006 3426 2.758 - - 0.969 - - - 0.851 0.938 - DENN/MADD domain containing 5A [Source:ZFIN;Acc:ZDB-GENE-071211-1]
5. psma3 ENSDARG00000086618 6200 2.674 - 0.988 - 0.979 - - - - 0.707 proteasome subunit alpha 3 [Source:ZFIN;Acc:ZDB-GENE-050913-120]
6. fam122b ENSDARG00000036500, ENSDARG00000116582 1408 2.673 - - - 0.987 - - - 0.934 0.752 family with sequence similarity 122B [Source:ZFIN;Acc:ZDB-GENE-040801-204]
7. creb3l3l ENSDARG00000020926, ENSDARG00000116217 1458 2.651 - - 0.954 - - - 0.817 0.880 - cAMP responsive element binding protein 3-like 3 like [Source:ZFIN;Acc:ZDB-GENE-040426-2942]
8. max ENSDARG00000024844 6035 2.641 - 0.979 - - - - 0.798 0.864 - myc associated factor X [Source:ZFIN;Acc:ZDB-GENE-990415-152]
9. myeov2 3351 2.581 - - - 0.963 - 0.719 0.899 - - myeloma overexpressed 2
10. si:ch211-11k18.4 ENSDARG00000087869 3298 2.53 - - - 0.988 - 0.786 0.756 - - si:ch211-11k18.4 [Source:ZFIN;Acc:ZDB-GENE-070912-22]
11. cdc34b ENSDARG00000012627 3879 2.529 - - - 0.968 - 0.714 - - 0.847 cell division cycle 34 homolog (S. cerevisiae) b [Source:ZFIN;Acc:ZDB-GENE-040718-439]
12. ppm1da ENSDARG00000009273 7713 2.515 - 0.786 0.899 - - - - - 0.830 protein phosphatase, Mg2+/Mn2+ dependent, 1Da [Source:ZFIN;Acc:ZDB-GENE-040426-815]
13. brd4 ENSDARG00000078904 5367 2.511 - - 0.942 - - 0.759 0.810 - - bromodomain containing 4 [Source:ZFIN;Acc:ZDB-GENE-030131-267]
14. atrx ENSDARG00000042236, ENSDARG00000112921, ENSDARG00000116878 7922 2.484 - - - - - 0.797 0.740 0.947 - alpha thalassemia/mental retardation syndrome X-linked homolog (human) [Source:ZFIN;Acc:ZDB-GENE-030912-11]
15. bri3bp ENSDARG00000010108 6295 2.472 - - 0.896 - - - - 0.839 0.737 bri3 binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-5254]
16. bag6 ENSDARG00000075892 3782 2.442 - - 0.944 - - - 0.734 - 0.764 BCL2 associated athanogene 6 [Source:ZFIN;Acc:ZDB-GENE-010501-5]
17. GANAB_1 GANAB_1 685 2.4 - - - - - - 0.746 0.945 0.709
18. zgc:56493 ENSDARG00000031435 33407 2.259 - - - - - 0.815 0.743 - 0.701 zgc:56493 [Source:ZFIN;Acc:ZDB-GENE-030131-8581]
19. rrm1 ENSDARG00000014017 7296 2.255 - - - - - - 0.719 0.785 0.751 ribonucleotide reductase M1 polypeptide [Source:ZFIN;Acc:ZDB-GENE-990415-247]
20. anp32a ENSDARG00000006487 28249 2.203 - - - 0.710 - - 0.741 - 0.752 acidic (leucine-rich) nuclear phosphoprotein 32 family, member A [Source:ZFIN;Acc:ZDB-GENE-030131-7850]
21. fgfr2 ENSDARG00000058115 6743 1.972 - 0.982 - 0.990 - - - - - fibroblast growth factor receptor 2 [Source:ZFIN;Acc:ZDB-GENE-030323-1]
22. zc4h2 ENSDARG00000015314, ENSDARG00000112180 5141 1.971 - 0.996 - 0.975 - - - - - zinc finger, C4H2 domain containing [Source:ZFIN;Acc:ZDB-GENE-030131-2207]
23. CABZ01079490.1 CABZ01079490.1 1808 1.961 - 0.997 0.964 - - - - - -
24. zgc:100829 ENSDARG00000015557 1686 1.955 - 0.994 0.961 - - - - - - zgc:100829 [Source:ZFIN;Acc:ZDB-GENE-040801-54]
25. gfap ENSDARG00000025301 5584 1.954 - 0.996 0.958 - - - - - - glial fibrillary acidic protein [Source:ZFIN;Acc:ZDB-GENE-990914-3]
26. rab5c ENSDARG00000026712 4733 1.953 - - 0.973 0.980 - - - - - RAB5C, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-031118-30]
27. si:ch73-375g18.1 ENSDARG00000075024 2431 1.949 - 0.995 0.954 - - - - - - si:ch73-375g18.1 [Source:ZFIN;Acc:ZDB-GENE-110408-56]
28. fzr1 fzr1 2984 1.946 - - 0.963 0.983 - - - - -
29. tra2b ENSDARG00000002168 3218 1.941 - 0.994 0.947 - - - - - - transformer 2 beta homolog [Source:ZFIN;Acc:ZDB-GENE-040426-1094]
30. mrpl11 ENSDARG00000013075 2927 1.931 - - 0.949 0.982 - - - - - mitochondrial ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040718-294]
31. top2a ENSDARG00000024488 4273 1.922 - 0.982 - - - - - 0.940 - DNA topoisomerase II alpha [Source:ZFIN;Acc:ZDB-GENE-030131-2453]
32. skp2 ENSDARG00000004937, ENSDARG00000114929 1584 1.911 - - 0.964 - - - - 0.947 - S-phase kinase-associated protein 2, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-030219-158]
33. eftud2 ENSDARG00000012261 3081 1.91 - - 0.945 0.965 - - - - - elongation factor Tu GTP binding domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1569]
34. arpp19b ENSDARG00000039880 4823 1.903 - - 0.937 0.966 - - - - - cAMP-regulated phosphoprotein 19b [Source:ZFIN;Acc:ZDB-GENE-040426-930]
35. cops7a ENSDARG00000022788, ENSDARG00000112421 5302 1.887 - - - 0.976 - - - 0.911 - COP9 constitutive photomorphogenic homolog subunit 7A [Source:ZFIN;Acc:ZDB-GENE-030131-8680]
36. mphosph8 ENSDARG00000005576, ENSDARG00000114033 5350 1.886 - 0.980 - - - - - 0.906 - M-phase phosphoprotein 8 [Source:ZFIN;Acc:ZDB-GENE-050309-191]
37. ppp3ccb ENSDARG00000057456, ENSDARG00000116250 6265 1.884 - - 0.917 0.967 - - - - - protein phosphatase 3, catalytic subunit, gamma isozyme, b [Source:ZFIN;Acc:ZDB-GENE-070112-1102]
38. nme3 ENSDARG00000100990 3889 1.882 - - 0.958 - - - - 0.924 - NME/NM23 nucleoside diphosphate kinase 3 [Source:ZFIN;Acc:ZDB-GENE-000210-34]
39. CPEB4 CPEB4 3249 1.88 - 0.985 - - - - - 0.895 -
40. pinx1 ENSDARG00000023532 4452 1.879 - - 0.945 - - - - 0.934 - PIN2 (TERF1) interacting telomerase inhibitor 1 [Source:ZFIN;Acc:ZDB-GENE-030515-2]
41. setbp1 ENSDARG00000093799 4499 1.875 - 0.997 - - - - - 0.878 - SET binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-060526-72]
42. efnb3b ENSDARG00000042277 5823 1.865 - - 0.929 0.936 - - - - - ephrin-B3b [Source:ZFIN;Acc:ZDB-GENE-010618-3]
43. CD99L2 ENSDARG00000056722 5588 1.86 - - - 0.982 - - - 0.878 - CD99 molecule-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1986]
44. ube2h ENSDARG00000000019 9900 1.844 - - 0.888 0.956 - - - - - ubiquitin-conjugating enzyme E2H (UBC8 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-030616-67]
45. GATAD2B ENSDARG00000005834 3855 1.839 - - 0.885 - - - - 0.954 - GATA zinc finger domain containing 2B [Source:ZFIN;Acc:ZDB-GENE-060503-655]
46. srsf6b ENSDARG00000016783 9926 1.835 - 0.968 - - - - - - 0.867 serine/arginine-rich splicing factor 6b [Source:ZFIN;Acc:ZDB-GENE-041219-1]
47. copb2 ENSDARG00000038743, ENSDARG00000114286 6404 1.835 - 0.968 - - - - 0.867 - - coatomer protein complex, subunit beta 2 [Source:ZFIN;Acc:ZDB-GENE-010724-7]
48. fbxo28 ENSDARG00000027159 9602 1.835 - 0.955 - - - - 0.880 - - F-box protein 28 [Source:ZFIN;Acc:ZDB-GENE-030131-4665]
49. ezrb ENSDARG00000025091 2861 1.826 - 0.985 - - - - 0.841 - - ezrin b [Source:ZFIN;Acc:ZDB-GENE-050803-1]
50. zc3h13 ENSDARG00000037177, ENSDARG00000113331 2662 1.822 - - 0.950 - - - - - 0.872 zinc finger CCCH-type containing 13 [Source:ZFIN;Acc:ZDB-GENE-040426-1619]
51. psmd11a ENSDARG00000060150 4529 1.82 - 0.994 - - - - 0.826 - - proteasome 26S subunit, non-ATPase 11a [Source:ZFIN;Acc:ZDB-GENE-030131-2711]
52. tox4 tox4 1671 1.818 - - - 0.988 - - - - 0.830
53. sap30l ENSDARG00000030213 5795 1.808 - - - 0.978 - 0.830 - - - sap30-like [Source:ZFIN;Acc:ZDB-GENE-030131-5287]
54. arih2 ENSDARG00000012848 7087 1.8 - - 0.865 - - - - 0.935 - ariadne homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040426-2158]
55. thrap3b ENSDARG00000098228 4396 1.796 - - 0.864 - - - - 0.932 - thyroid hormone receptor associated protein 3b [Source:ZFIN;Acc:ZDB-GENE-040516-9]
56. si:dkey-19e4.5 ENSDARG00000089886 2562 1.796 - - 0.960 - - - - - 0.836 si:dkey-19e4.5 [Source:ZFIN;Acc:ZDB-GENE-030131-1852]
57. rb1 ENSDARG00000006782 1445 1.794 0.808 - - 0.986 - - - - - retinoblastoma 1 [Source:ZFIN;Acc:ZDB-GENE-040428-1]
58. prkrip1 ENSDARG00000033126, ENSDARG00000113803 1634 1.79 - - - 0.986 - - - - 0.804 PRKR interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-111011-2]
59. dock7 ENSDARG00000078675 1995 1.789 - - - - - - - 0.947 0.842 dedicator of cytokinesis 7 [Source:ZFIN;Acc:ZDB-GENE-050302-15]
60. KDM6B KDM6B 10265 1.788 - - - 0.963 - - - - 0.825
61. vta1 ENSDARG00000013732 6072 1.779 - - 0.968 - - 0.811 - - - vesicle (multivesicular body) trafficking 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2154]
62. CABZ01055343.2 CABZ01055343.2 10312 1.777 - - - 0.973 - 0.804 - - -
63. prr12a ENSDARG00000074229 1668 1.774 - - 0.950 - - - - - 0.824 proline rich 12a [Source:ZFIN;Acc:ZDB-GENE-041111-223]
64. taf13 ENSDARG00000070834, ENSDARG00000109314 1982 1.773 - - 0.958 - - - 0.815 - - TATA-box binding protein associated factor 13 [Source:ZFIN;Acc:ZDB-GENE-030131-2873]
65. phc2b_1 ENSDARG00000013224 1316 1.769 - - - - - - - 0.962 0.807 polyhomeotic homolog 2b (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040426-1113]
66. supt5h ENSDARG00000042724, ENSDARG00000111598 6419 1.766 - - - 0.976 - - - - 0.790 SPT5 homolog, DSIF elongation factor subunit [Source:ZFIN;Acc:ZDB-GENE-001207-1]
67. ppifb ENSDARG00000052842 3533 1.765 - - 0.923 - - - - 0.842 - peptidylprolyl isomerase Fb [Source:ZFIN;Acc:ZDB-GENE-051030-126]
68. znf207a ENSDARG00000015538 2630 1.763 - - 0.961 - - - - - 0.802 zinc finger protein 207, a [Source:ZFIN;Acc:ZDB-GENE-040426-2273]
69. rnf183 ENSDARG00000068851 2427 1.76 - - 0.955 - - - 0.805 - - ring finger protein 183 [Source:ZFIN;Acc:ZDB-GENE-060929-1090]
70. zgc:111974 zgc:111974 1386 1.76 - 0.995 - - - - 0.765 - -
71. carm1 ENSDARG00000018698 5599 1.76 - - 0.946 - - - - - 0.814 coactivator-associated arginine methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040724-77]
72. prps1b ENSDARG00000037506, ENSDARG00000110507 4170 1.756 - - - - - - 0.811 0.945 - phosphoribosyl pyrophosphate synthetase 1B [Source:ZFIN;Acc:ZDB-GENE-030131-4011]
73. CCDC88C ENSDARG00000053713 1026 1.755 - - 0.965 - - - - - 0.790 coiled-coil domain containing 88C [Source:ZFIN;Acc:ZDB-GENE-100419-3]
74. ebf3 ebf3 4238 1.752 - - - - - - - 0.951 0.801
75. lrrc8a lrrc8a 674 1.748 - - 0.964 - - - 0.784 - -
76. ccnl1a ENSDARG00000055124, ENSDARG00000116311 2174 1.747 - - - 0.992 - - 0.755 - - cyclin L1a [Source:ZFIN;Acc:ZDB-GENE-050419-206]
77. CU862021.1 CU862021.1 5925 1.744 - - - - - - 0.858 0.886 -
78. fam102bb ENSDARG00000002333 1483 1.743 - - - 0.988 - - - - 0.755 family with sequence similarity 102, member B, b [Source:ZFIN;Acc:ZDB-GENE-041014-330]
79. ccz1 ENSDARG00000056559, ENSDARG00000109877 2629 1.737 - - - - - 0.809 - 0.928 - CCZ1 homolog, vacuolar protein trafficking and biogenesis associated [Source:ZFIN;Acc:ZDB-GENE-040426-698]
80. gpd1c ENSDARG00000036942 869 1.737 - 0.996 - - - - 0.741 - - glycerol-3-phosphate dehydrogenase 1c [Source:ZFIN;Acc:ZDB-GENE-040426-2576]
81. mcrs1 ENSDARG00000020840 3232 1.737 - - - 0.988 - - - - 0.749 microspherule protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2434]
82. hmgb3a ENSDARG00000056725 15668 1.735 - - - 0.802 - - - 0.933 - high mobility group box 3a [Source:ZFIN;Acc:ZDB-GENE-050428-1]
83. nr1d2b ENSDARG00000009594 1144 1.735 - - - 0.987 - - 0.748 - - nuclear receptor subfamily 1, group D, member 2b [Source:ZFIN;Acc:ZDB-GENE-990415-244]
84. tes ENSDARG00000051857 2020 1.735 - 0.995 - - - - 0.740 - - testis derived transcript (3 LIM domains) [Source:ZFIN;Acc:ZDB-GENE-040718-59]
85. gpcpd1 ENSDARG00000016011 2563 1.732 - - - - - 0.808 - 0.924 - glycerophosphocholine phosphodiesterase 1 [Source:ZFIN;Acc:ZDB-GENE-060503-472]
86. boc ENSDARG00000074335 4832 1.732 - 0.842 - - - - - 0.890 - BOC cell adhesion associated, oncogene regulated [Source:ZFIN;Acc:ZDB-GENE-030131-6560]
87. rbbp6 ENSDARG00000037919 4813 1.731 - - - 0.964 - - - - 0.767 retinoblastoma binding protein 6 [Source:ZFIN;Acc:ZDB-GENE-040930-5]
88. ints8 ENSDARG00000057986 1063 1.731 - - 0.956 - - - - - 0.775 integrator complex subunit 8 [Source:ZFIN;Acc:ZDB-GENE-050522-556]
89. rcan1a ENSDARG00000003109, ENSDARG00000112478 3319 1.73 - - - - - - 0.841 0.889 - regulator of calcineurin 1a [Source:ZFIN;Acc:ZDB-GENE-040801-135]
90. psma6b ENSDARG00000013966 4410 1.727 - - - - - - 0.793 0.934 - proteasome subunit alpha 6b [Source:ZFIN;Acc:ZDB-GENE-040718-329]
91. atp2b4 5891 1.727 - 0.934 - - - - 0.793 - - ATPase, Ca++ transporting, plasma membrane 4
92. puf60b ENSDARG00000001241 13827 1.726 - - - - - - - 0.931 0.795 poly-U binding splicing factor b [Source:ZFIN;Acc:ZDB-GENE-040625-116]
93. myo1b ENSDARG00000024694 1761 1.724 - - 0.970 - - - - - 0.754 myosin IB [Source:ZFIN;Acc:ZDB-GENE-030131-695]
94. gnao1a ENSDARG00000016676 8184 1.723 - - - 0.956 - - - - 0.767 guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O, a [Source:ZFIN;Acc:ZDB-GENE-040426-1757]
95. bmpr1bb ENSDARG00000102742 1036 1.723 - 0.994 - - - - - - 0.729 bone morphogenetic protein receptor, type IBb [Source:ZFIN;Acc:ZDB-GENE-090610-1]
96. eif2b2 ENSDARG00000041397, ENSDARG00000114220 2348 1.721 - - 0.953 - - - - - 0.768 eukaryotic translation initiation factor 2B, subunit 2 beta [Source:ZFIN;Acc:ZDB-GENE-040426-2605]
97. esrrga ENSDARG00000004861 805 1.716 - 0.996 - - - - 0.720 - - estrogen-related receptor gamma a [Source:ZFIN;Acc:ZDB-GENE-030821-2]
98. vps25 ENSDARG00000059079 3747 1.713 - - - - - 0.807 0.906 - - vacuolar protein sorting 25 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050506-30]
99. ATL2 ENSDARG00000057719, ENSDARG00000113378, ENSDARG00000113487 1987 1.71 - - 0.965 - - - 0.745 - - atlastin GTPase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6505]
100. dido1 ENSDARG00000057940 3819 1.71 - - - - - - - 0.922 0.788 death inducer-obliterator 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6117]

There are 2174 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA