Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for elk3

Gene Name Gene ID Reads Annotation
elk3 ENSDARG00000018688, ENSDARG00000110853 1108 ELK3, ETS-domain protein [Source:ZFIN;Acc:ZDB-GENE-030716-2]










Genes with expression patterns similar to elk3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. elk3 ENSDARG00000018688, ENSDARG00000110853 1108 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ELK3, ETS-domain protein [Source:ZFIN;Acc:ZDB-GENE-030716-2]
2. limk2 ENSDARG00000005104 2598 1.892 - - - - 0.989 - - - 0.903 LIM domain kinase 2 [Source:ZFIN;Acc:ZDB-GENE-040718-398]
3. ARID3A ENSDARG00000070843 1613 1.772 0.780 - - - 0.992 - - - - AT rich interactive domain 3A (BRIGHT-like) [Source:ZFIN;Acc:ZDB-GENE-140106-97]
4. smad5 ENSDARG00000037238 1684 1.746 - 0.917 - - - - - - 0.829 SMAD family member 5 [Source:ZFIN;Acc:ZDB-GENE-990603-9]
5. DENND4B ENSDARG00000102914 1001 1.738 - - - - 0.990 - 0.748 - - DENN/MADD domain containing 4B [Source:ZFIN;Acc:ZDB-GENE-130530-684]
6. creb3l2 ENSDARG00000063563 1284 1.738 - 0.865 - - - - - - 0.873 cAMP responsive element binding protein 3-like 2 [Source:ZFIN;Acc:ZDB-GENE-070112-1542]
7. sema3fa ENSDARG00000011163 759 1.733 - - - - 0.997 - 0.736 - - sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Fa [Source:ZFIN;Acc:ZDB-GENE-050513-1]
8. emc1 ENSDARG00000057255 3582 1.73 - - - - 0.977 - 0.753 - - ER membrane protein complex subunit 1 [Source:ZFIN;Acc:ZDB-GENE-060810-98]
9. VPS37B_1 VPS37B_1 1816 1.722 - 0.729 - - 0.993 - - - -
10. slc9a3r1 slc9a3r1 743 1.72 - 0.728 - - 0.992 - - - -
11. epc1 epc1 1164 1.715 - 0.720 - - 0.995 - - - -
12. mtfr1 ENSDARG00000045304 277 1.712 - - - - - - 0.773 - 0.939 mitochondrial fission regulator 1 [Source:ZFIN;Acc:ZDB-GENE-041212-86]
13. slc25a32b ENSDARG00000026835 502 1.711 - 0.774 - - - - - - 0.937 solute carrier family 25 (mitochondrial folate carrier), member 32b [Source:ZFIN;Acc:ZDB-GENE-050306-39]
14. pak2a ENSDARG00000068177 8931 1.701 - - - - 0.912 - - - 0.789 p21 protein (Cdc42/Rac)-activated kinase 2a [Source:ZFIN;Acc:ZDB-GENE-021011-2]
15. sdha ENSDARG00000016721 8255 1.685 - - - - 0.952 - - - 0.733 succinate dehydrogenase complex, subunit A, flavoprotein (Fp) [Source:ZFIN;Acc:ZDB-GENE-040426-874]
16. stau1 ENSDARG00000044182, ENSDARG00000115476 6121 1.678 - 0.721 - - 0.957 - - - - staufen double-stranded RNA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6372]
17. ARF5 ENSDARG00000070472, ENSDARG00000115687 6101 1.675 - - - - 0.929 - - - 0.746 ADP-ribosylation factor 5 [Source:ZFIN;Acc:ZDB-GENE-030910-5]
18. emilin3a ENSDARG00000078052 1652 1.659 - - - - 0.817 - - - 0.842 elastin microfibril interfacer 3a [Source:ZFIN;Acc:ZDB-GENE-080612-2]
19. glud1a ENSDARG00000008816, ENSDARG00000114252 3468 1.64 - 0.765 - - - - - - 0.875 glutamate dehydrogenase 1a [Source:ZFIN;Acc:ZDB-GENE-030114-2]
20. alg2 ENSDARG00000070399 772 1.635 - - - - - - 0.725 - 0.910 asparagine-linked glycosylation 2 (alpha-1,3-mannosyltransferase) [Source:ZFIN;Acc:ZDB-GENE-060502-2]
21. si:dkey-13i19.8 ENSDARG00000093058 4617 1.633 - 0.769 - - - - - - 0.864 si:dkey-13i19.8 [Source:ZFIN;Acc:ZDB-GENE-041210-156]
22. hoxd11a ENSDARG00000059267 521 1.623 - - - - - - 0.714 - 0.909 homeobox D11a [Source:ZFIN;Acc:ZDB-GENE-990415-117]
23. pdgfra_1 ENSDARG00000070494, ENSDARG00000113952 1996 1.621 - - - - - - 0.708 - 0.913 platelet-derived growth factor receptor, alpha polypeptide [Source:ZFIN;Acc:ZDB-GENE-990415-208]
24. ahcyl1 ENSDARG00000056331 1765 1.621 - - - - - - 0.737 - 0.884 adenosylhomocysteinase-like 1 [Source:ZFIN;Acc:ZDB-GENE-021206-7]
25. nucks1b ENSDARG00000012777 4468 1.61 - 0.706 - - - - - - 0.904 nuclear casein kinase and cyclin-dependent kinase substrate 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4544]
26. dhdhl ENSDARG00000028336 844 1.607 0.887 0.720 - - - - - - - dihydrodiol dehydrogenase (dimeric), like [Source:ZFIN;Acc:ZDB-GENE-040426-2180]
27. ss18 ENSDARG00000002970 2618 1.603 - 0.740 - - - - - - 0.863 synovial sarcoma translocation, chromosome 18 (H. sapiens) [Source:ZFIN;Acc:ZDB-GENE-030131-4867]
28. cldn7b ENSDARG00000014047, ENSDARG00000114912 2960 1.599 - - - 0.701 - - - - 0.898 claudin 7b [Source:ZFIN;Acc:ZDB-GENE-001103-5]
29. tmed3 ENSDARG00000028816, ENSDARG00000113132 1686 1.588 - 0.777 - - - - - - 0.811 transmembrane p24 trafficking protein 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8335]
30. hbp1 ENSDARG00000028517 571 1.582 0.826 - - - - - 0.756 - - HMG-box transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-050522-414]
31. cope ENSDARG00000018562 17276 1.569 - - - - 0.711 - - - 0.858 coatomer protein complex, subunit epsilon [Source:ZFIN;Acc:ZDB-GENE-041114-59]
32. ppap2b ppap2b 2900 1.564 - 0.752 - - - - - - 0.812
33. mmrn2b ENSDARG00000073711 391 1.547 - 0.773 - - - - 0.774 - - multimerin 2b [Source:ZFIN;Acc:ZDB-GENE-080415-2]
34. cxcl12b ENSDARG00000055100, ENSDARG00000113088 4476 1.539 - - - - - 0.761 - - 0.778 chemokine (C-X-C motif) ligand 12b (stromal cell-derived factor 1) [Source:ZFIN;Acc:ZDB-GENE-030721-1]
35. shisa3 ENSDARG00000075467 485 1.539 0.812 - - - - 0.727 - - - shisa family member 3 [Source:ZFIN;Acc:ZDB-GENE-070112-2022]
36. sh3bp5la ENSDARG00000019160 441 1.528 - 0.723 - - - - 0.805 - - SH3-binding domain protein 5-like, a [Source:ZFIN;Acc:ZDB-GENE-040426-2187]
37. leprel1 leprel1 437 1.524 - 0.800 - 0.724 - - - - -
38. vgll4a ENSDARG00000094332 1410 1.524 0.759 - - - - - 0.765 - - vestigial-like family member 4a [Source:ZFIN;Acc:ZDB-GENE-100922-230]
39. hsdl2 ENSDARG00000002523 2746 1.494 - 0.727 - - - - - - 0.767 hydroxysteroid dehydrogenase like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1066]
40. pl10 pl10 10795 1.494 - 0.705 - - 0.789 - - - -
41. emilin1b ENSDARG00000026166 1530 1.493 - - - 0.727 - - - - 0.766 elastin microfibril interfacer 1b [Source:ZFIN;Acc:ZDB-GENE-060818-36]
42. gclm ENSDARG00000018953 1712 1.489 - 0.775 - - - - 0.714 - - glutamate-cysteine ligase, modifier subunit [Source:ZFIN;Acc:ZDB-GENE-030131-5906]
43. slc30a10 ENSDARG00000103983 46 1.48 0.770 - - - - - 0.710 - - solute carrier family 30, member 10 [Source:ZFIN;Acc:ZDB-GENE-060608-2]
44. mxtx1 ENSDARG00000069382 32 1.475 0.775 - - - - - 0.700 - - mix-type homeobox gene 1 [Source:ZFIN;Acc:ZDB-GENE-000710-7]
45. klhl8 ENSDARG00000101270 1305 1.46 - 0.757 - - - - - 0.703 - kelch-like family member 8 [Source:ZFIN;Acc:ZDB-GENE-070209-226]
46. vasna ENSDARG00000099266, ENSDARG00000111629 488 1.455 0.732 0.723 - - - - - - - vasorin a [Source:ZFIN;Acc:ZDB-GENE-050522-43]
47. col6a1 ENSDARG00000074908 2339 1.452 - 0.723 - - - - - - 0.729 collagen, type VI, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-070501-6]
48. atxn7l2b ENSDARG00000056268 226 1.444 - - - 0.709 - 0.735 - - - ataxin 7-like 2b [Source:ZFIN;Acc:ZDB-GENE-040718-403]
49. C21H17orf85 C21H17orf85 1167 1.417 - 0.701 - - - - 0.716 - -
50. C3H16orf89 C3H16orf89 449 0.997 - - - - 0.997 - - - -
51. tmem234 ENSDARG00000078333 488 0.997 - - - - 0.997 - - - - transmembrane protein 234 [Source:ZFIN;Acc:ZDB-GENE-090313-326]
52. git2b ENSDARG00000042791, ENSDARG00000111846 1332 0.997 - - - - 0.997 - - - - G protein-coupled receptor kinase interacting ArfGAP 2b [Source:ZFIN;Acc:ZDB-GENE-070112-2192]
53. si:dkey-114e9.1 si:dkey-114e9.1 233 0.997 - - - - 0.997 - - - -
54. errfi1 errfi1 979 0.997 - - - - 0.997 - - - -
55. CABZ01073954.1 CABZ01073954.1 258 0.997 - - - - 0.997 - - - -
56. pbx1a ENSDARG00000100494 854 0.997 - - - - 0.997 - - - - pre-B-cell leukemia homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-000405-1]
57. si:dkey-70e17.2 si:dkey-70e17.2 371 0.997 - - - - 0.997 - - - -
58. si:dkey-30k6.5 ENSDARG00000057238 617 0.997 - - - - 0.997 - - - - si:dkey-30k6.5 [Source:ZFIN;Acc:ZDB-GENE-091204-299]
59. kcnq5a ENSDARG00000069954 492 0.997 - - - - 0.997 - - - - potassium voltage-gated channel, KQT-like subfamily, member 5a [Source:ZFIN;Acc:ZDB-GENE-090312-185]
60. slc46a1 ENSDARG00000026149 297 0.997 - - - - 0.997 - - - - solute carrier family 46 (folate transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1012]
61. bin2b ENSDARG00000010255 2649 0.997 - - - - 0.997 - - - - bridging integrator 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5598]
62. synm ENSDARG00000062350, ENSDARG00000113948, ENSDARG00000114029 483 0.997 - - - - 0.997 - - - - synemin, intermediate filament protein [Source:ZFIN;Acc:ZDB-GENE-050419-81]
63. vldlr ENSDARG00000006257 772 0.996 - - - - 0.996 - - - - very low density lipoprotein receptor [Source:ZFIN;Acc:ZDB-GENE-040426-803]
64. nrg2a ENSDARG00000077818 854 0.996 - - - - 0.996 - - - - neuregulin 2a [Source:ZFIN;Acc:ZDB-GENE-070615-10]
65. trim24 ENSDARG00000103350 431 0.996 - - - - 0.996 - - - - tripartite motif containing 24 [Source:ZFIN;Acc:ZDB-GENE-030131-5913]
66. acvr2aa ENSDARG00000011188 1454 0.996 - - - - 0.996 - - - - activin A receptor type 2Aa [Source:ZFIN;Acc:ZDB-GENE-980526-227]
67. slc4a2b ENSDARG00000052330 1900 0.996 - - - - 0.996 - - - - solute carrier family 4 (anion exchanger), member 2b [Source:ZFIN;Acc:ZDB-GENE-030429-14]
68. inpp4aa ENSDARG00000063352 1297 0.995 - - - - 0.995 - - - - inositol polyphosphate-4-phosphatase type I Aa [Source:ZFIN;Acc:ZDB-GENE-060312-5]
69. gabpb2a ENSDARG00000007943 1570 0.995 - - - - 0.995 - - - - GA binding protein transcription factor subunit beta 2a [Source:ZFIN;Acc:ZDB-GENE-030131-5733]
70. RNF111 ENSDARG00000078802 1357 0.995 - - - - 0.995 - - - - ring finger protein 111 [Source:ZFIN;Acc:ZDB-GENE-070808-2]
71. ERO1LB ERO1LB 1433 0.995 - - - - 0.995 - - - -
72. slc48a1b ENSDARG00000026109 1427 0.995 - - - - 0.995 - - - - solute carrier family 48 (heme transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-030131-8226]
73. tpt1 ENSDARG00000092693 1110 0.995 - - - - 0.995 - - - - tumor protein, translationally-controlled 1 [Source:ZFIN;Acc:ZDB-GENE-990603-10]
74. pim3 ENSDARG00000055129 1517 0.994 - - - - 0.994 - - - - Pim-3 proto-oncogene, serine/threonine kinase [Source:ZFIN;Acc:ZDB-GENE-050809-111]
75. ripk4 ENSDARG00000043211 775 0.994 - - - - 0.994 - - - - receptor-interacting serine-threonine kinase 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2042]
76. wdr43 ENSDARG00000077264 1992 0.994 - - - - 0.994 - - - - WD repeat domain 43 [Source:ZFIN;Acc:ZDB-GENE-021231-3]
77. ttc27 ENSDARG00000007918 1228 0.994 - - - - 0.994 - - - - tetratricopeptide repeat domain 27 [Source:ZFIN;Acc:ZDB-GENE-030102-1]
78. foxa2 ENSDARG00000003411 2309 0.993 - - - - 0.993 - - - - forkhead box A2 [Source:ZFIN;Acc:ZDB-GENE-980526-404]
79. CR361563.1 CR361563.1 1355 0.993 - - - - 0.993 - - - -
80. iars2 ENSDARG00000044134 1990 0.993 - - - - 0.993 - - - - isoleucyl-tRNA synthetase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-030616-608]
81. rfc5 ENSDARG00000035634 974 0.993 - - - - 0.993 - - - - replication factor C (activator 1) 5 [Source:ZFIN;Acc:ZDB-GENE-040907-1]
82. KIF4A KIF4A 3322 0.993 - - - - 0.993 - - - -
83. RNF214 RNF214 816 0.993 - - - - 0.993 - - - -
84. zgc:163098 ENSDARG00000078911, ENSDARG00000111691, ENSDARG00000113714, ENSDARG00000115110 1802 0.993 - - - - 0.993 - - - - zgc:163098 [Source:ZFIN;Acc:ZDB-GENE-070410-141]
85. ifrd1 ENSDARG00000068708 2858 0.992 - - - - 0.992 - - - - interferon-related developmental regulator 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6132]
86. smim7 ENSDARG00000074848 1260 0.992 - - - - 0.992 - - - - small integral membrane protein 7 [Source:ZFIN;Acc:ZDB-GENE-060810-180]
87. rnd3a ENSDARG00000076799 4705 0.992 - - - - 0.992 - - - - Rho family GTPase 3a [Source:ZFIN;Acc:ZDB-GENE-010319-40]
88. ppip5k2 ENSDARG00000078441 1074 0.992 - - - - 0.992 - - - - diphosphoinositol pentakisphosphate kinase 2 [Source:ZFIN;Acc:ZDB-GENE-091204-125]
89. CABZ01072607.1 ENSDARG00000113761 784 0.992 - - - - 0.992 - - - - dynein cytoplasmic 2 heavy chain 1 [Source:NCBI gene;Acc:100332402]
90. commd4 ENSDARG00000061946 3281 0.992 - - - - 0.992 - - - - COMM domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-060929-600]
91. 5S_rRNA_21 5S_rRNA_21 1323 0.992 - - - - 0.992 - - - -
92. zdhhc9 ENSDARG00000060515 981 0.991 - - - - 0.991 - - - - zinc finger, DHHC-type containing 9 [Source:ZFIN;Acc:ZDB-GENE-071004-8]
93. cisd1 ENSDARG00000079516, ENSDARG00000114546 2677 0.991 - - - - 0.991 - - - - CDGSH iron sulfur domain 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1162]
94. klf11a ENSDARG00000030844 3972 0.991 - - - - 0.991 - - - - Kruppel-like factor 11a [Source:ZFIN;Acc:ZDB-GENE-030131-3568]
95. akirin1 ENSDARG00000039969, ENSDARG00000116670 2533 0.991 - - - - 0.991 - - - - akirin 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2178]
96. suds3 ENSDARG00000073737, ENSDARG00000116918 2416 0.991 - - - - 0.991 - - - - SDS3 homolog, SIN3A corepressor complex component [Source:ZFIN;Acc:ZDB-GENE-040801-236]
97. srcap ENSDARG00000005236 1740 0.991 - - - - 0.991 - - - - Snf2-related CREBBP activator protein [Source:ZFIN;Acc:ZDB-GENE-041008-127]
98. si:dkey-228b2.5 1760 0.991 - - - - 0.991 - - - - si:dkey-228b2.5
99. ctdspla ENSDARG00000071673 1447 0.99 - - - - 0.990 - - - - CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like a [Source:ZFIN;Acc:ZDB-GENE-060825-333]
100. itga5 ENSDARG00000006353 1876 0.99 - - - - 0.990 - - - - integrin, alpha 5 (fibronectin receptor, alpha polypeptide) [Source:ZFIN;Acc:ZDB-GENE-031116-52]

There are 1193 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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