Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for elavl3

Gene Name Gene ID Reads Annotation
elavl3 ENSDARG00000014420 8644 ELAV like neuron-specific RNA binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-980526-76]










Genes with expression patterns similar to elavl3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. elavl3 ENSDARG00000014420 8644 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ELAV like neuron-specific RNA binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-980526-76]
2. UBE2QL1 ENSDARG00000079276 3474 4.304 - - 0.980 0.818 - 0.879 0.895 0.732 - ubiquitin-conjugating enzyme E2Q family-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8137]
3. myt1a ENSDARG00000074030, ENSDARG00000116035 2839 3.578 0.978 - - 0.810 - 0.846 0.944 - - myelin transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3885]
4. ZFHX3 ENSDARG00000103057 7759 3.421 - - - 0.818 - 0.823 0.947 0.833 - zinc finger homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-030131-7577]
5. pou3f2b ENSDARG00000076262, ENSDARG00000112713 2439 3.39 - - - 0.711 - 0.976 0.968 0.735 - POU class 3 homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-980526-370]
6. chd4a ENSDARG00000063535, ENSDARG00000111791 4059 3.382 - - 0.965 - 0.759 0.848 0.810 - - chromodomain helicase DNA binding protein 4a [Source:ZFIN;Acc:ZDB-GENE-041111-187]
7. marcksa ENSDARG00000004049 2518 3.351 - - - 0.890 - 0.806 0.831 0.824 - myristoylated alanine-rich protein kinase C substrate a [Source:ZFIN;Acc:ZDB-GENE-050522-145]
8. fscn1a ENSDARG00000059680 3999 3.238 - 0.764 0.978 0.720 - - - 0.776 - fascin actin-bundling protein 1a [Source:ZFIN;Acc:ZDB-GENE-031009-1]
9. lppr3a lppr3a 1294 3.079 - - - 0.767 0.761 0.770 0.781 - -
10. fmnl2b ENSDARG00000075041 1744 2.929 - - - 0.713 0.744 0.746 0.726 - - formin-like 2b [Source:ZFIN;Acc:ZDB-GENE-041111-182]
11. foxk2 ENSDARG00000030583 2982 2.924 - 0.765 - - - 0.713 0.724 0.722 - forkhead box K2 [Source:ZFIN;Acc:ZDB-GENE-030131-2861]
12. itm2ca ENSDARG00000043448 1265 2.86 0.961 - - - - 0.923 0.976 - - integral membrane protein 2Ca [Source:ZFIN;Acc:ZDB-GENE-040718-284]
13. gng3 ENSDARG00000009553 2530 2.859 - - - - - 0.908 0.972 - 0.979 guanine nucleotide binding protein (G protein), gamma 3 [Source:ZFIN;Acc:ZDB-GENE-010705-1]
14. AL935029.1 AL935029.1 514 2.825 0.951 - - - - 0.925 0.949 - -
15. trim36 ENSDARG00000062794 785 2.799 - - 0.980 - - 0.885 0.934 - - tripartite motif containing 36 [Source:ZFIN;Acc:ZDB-GENE-040426-2936]
16. pax6a ENSDARG00000103379 3061 2.794 - - - - - 0.903 0.907 - 0.984 paired box 6a [Source:ZFIN;Acc:ZDB-GENE-990415-200]
17. vim ENSDARG00000010008 3551 2.787 - 0.958 - - - 0.905 0.924 - - vimentin [Source:ZFIN;Acc:ZDB-GENE-011212-3]
18. pou3f3a ENSDARG00000042032 2835 2.775 - - - - 0.977 0.869 0.929 - - POU class 3 homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-980526-220]
19. pou2f2a ENSDARG00000019658, ENSDARG00000036816 2027 2.774 - - - - - 0.881 0.910 - 0.983 POU class 2 homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-060310-2]
20. nrarpb ENSDARG00000018958 6225 2.765 - - 0.949 - - 0.832 0.984 - - NOTCH regulated ankyrin repeat protein b [Source:ZFIN;Acc:ZDB-GENE-030515-7]
21. nova1 ENSDARG00000020178 4129 2.731 0.984 - - - - 0.820 0.927 - - neuro-oncological ventral antigen 1 [Source:ZFIN;Acc:ZDB-GENE-060526-113]
22. CABZ01111990.1 CABZ01111990.1 4374 2.691 - - - - - 0.952 0.961 0.778 -
23. her4.3 ENSDARG00000070770 613 2.69 - - - - - 0.967 0.968 0.755 - hairy-related 4, tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-081030-7]
24. cspg5a ENSDARG00000069981 1699 2.684 - - - 0.834 - 0.890 0.960 - - chondroitin sulfate proteoglycan 5a [Source:ZFIN;Acc:ZDB-GENE-080425-4]
25. nat8l ENSDARG00000077256, ENSDARG00000115322 3513 2.665 - - - - - 0.947 0.942 0.776 - N-acetyltransferase 8-like [Source:ZFIN;Acc:ZDB-GENE-030729-4]
26. lhx1b ENSDARG00000007944, ENSDARG00000111635 254 2.638 - - - - - 0.973 0.901 0.764 - LIM homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-980526-116]
27. C8H1orf106 C8H1orf106 2690 2.637 - - - 0.710 - 0.985 0.942 - -
28. nell2b ENSDARG00000062797 854 2.634 - - - - - 0.954 0.955 0.725 - neural EGFL like 2b [Source:ZFIN;Acc:ZDB-GENE-030131-8026]
29. dbx2 2971 2.626 - - - - 0.760 0.904 0.962 - - developing brain homeobox 2
30. mnx1 ENSDARG00000035984, ENSDARG00000109419 1014 2.615 0.951 - - - - 0.802 0.862 - - motor neuron and pancreas homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040409-1]
31. bhlhe22 ENSDARG00000058039 1673 2.607 - - - - - 0.918 0.946 0.743 - basic helix-loop-helix family, member e22 [Source:ZFIN;Acc:ZDB-GENE-040426-1411]
32. sox19a ENSDARG00000010770, ENSDARG00000110497 4683 2.606 - - - - 0.743 0.885 0.978 - - SRY (sex determining region Y)-box 19a [Source:ZFIN;Acc:ZDB-GENE-980526-102]
33. clstn1 ENSDARG00000031720 5286 2.602 - - - - 0.705 0.957 0.940 - - calsyntenin 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1064]
34. skib ENSDARG00000008034 6518 2.597 - - 0.974 - - 0.747 0.876 - - v-ski avian sarcoma viral oncogene homolog b [Source:ZFIN;Acc:ZDB-GENE-990715-10]
35. cntnap2b ENSDARG00000074558, ENSDARG00000109616, ENSDARG00000116850 559 2.562 - - - - - 0.837 0.917 0.808 - contactin associated protein like 2b [Source:NCBI gene;Acc:563345]
36. pou3f2a ENSDARG00000070220 817 2.561 - - - - - 0.875 0.934 0.752 - POU class 3 homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-980526-139]
37. s1pr1 ENSDARG00000042690, ENSDARG00000113842, ENSDARG00000116038 2510 2.557 - - - 0.776 - 0.918 0.863 - - sphingosine-1-phosphate receptor 1 [Source:ZFIN;Acc:ZDB-GENE-001228-2]
38. tmeff1b ENSDARG00000056740 11253 2.544 - - - 0.760 - 0.891 0.893 - - transmembrane protein with EGF-like and two follistatin-like domains 1b [Source:ZFIN;Acc:ZDB-GENE-050706-143]
39. TUBA1A ENSDARG00000001889 25294 2.54 0.700 - - - - 0.854 0.986 - - tubulin, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-090507-4]
40. plp1a ENSDARG00000103732 3544 2.522 - - - 0.811 0.732 - 0.979 - - proteolipid protein 1a [Source:ZFIN;Acc:ZDB-GENE-001202-1]
41. mb21d2a mb21d2a 421 2.52 - - - 0.724 - 0.900 0.896 - -
42. st18 663 2.518 - - - 0.751 - - 0.968 0.799 - suppression of tumorigenicity 18, zinc finger
43. rims2a ENSDARG00000101606 1088 2.508 0.936 - - 0.713 - - 0.859 - - regulating synaptic membrane exocytosis 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1656]
44. nefmb ENSDARG00000043697 2052 2.502 - 0.705 - - - 0.950 0.847 - - neurofilament, medium polypeptide b [Source:ZFIN;Acc:ZDB-GENE-070103-4]
45. ppp1r14ab ENSDARG00000017710, ENSDARG00000110779 3296 2.498 - - - 0.765 - 0.953 0.780 - - protein phosphatase 1, regulatory (inhibitor) subunit 14Ab [Source:ZFIN;Acc:ZDB-GENE-040426-1783]
46. nbeaa ENSDARG00000070080 862 2.487 - - - - - 0.797 0.945 0.745 - neurobeachin a [Source:ZFIN;Acc:ZDB-GENE-050320-68]
47. her4.1 ENSDARG00000056732 1264 2.484 - - - - - 0.812 0.919 0.753 - hairy-related 4, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-980526-521]
48. hoxc8a ENSDARG00000070346 4252 2.47 0.957 - - - - 0.777 0.736 - - homeobox C8a [Source:ZFIN;Acc:ZDB-GENE-990415-114]
49. notch3 ENSDARG00000052139 15033 2.466 - - - 0.738 0.869 0.859 - - - notch 3 [Source:ZFIN;Acc:ZDB-GENE-000329-5]
50. C7H4orf48 C7H4orf48 1455 2.462 - - - - 0.761 - 0.929 0.772 -
51. gap43 ENSDARG00000099744 4114 2.453 - - - - - 0.762 0.943 0.748 - growth associated protein 43 [Source:ZFIN;Acc:ZDB-GENE-990415-87]
52. csdc2a ENSDARG00000041323, ENSDARG00000115932 490 2.448 - - - - - 0.796 0.858 0.794 - cold shock domain containing C2, RNA binding a [Source:ZFIN;Acc:ZDB-GENE-040718-442]
53. sprn ENSDARG00000056004 128 2.441 - - - - - 0.792 0.880 0.769 - shadow of prion protein [Source:ZFIN;Acc:ZDB-GENE-031110-1]
54. pcdh19 ENSDARG00000034344 2378 2.434 - - - - - 0.914 0.779 0.741 - protocadherin 19 [Source:ZFIN;Acc:ZDB-GENE-030131-4218]
55. SPTBN4_1 ENSDARG00000092624 473 2.43 - - - 0.732 - 0.972 0.726 - - spectrin beta, non-erythrocytic 4 [Source:HGNC Symbol;Acc:HGNC:14896]
56. ndrg4 ENSDARG00000103937 1234 2.429 - - - 0.789 - 0.737 0.903 - - NDRG family member 4 [Source:ZFIN;Acc:ZDB-GENE-060512-226]
57. si:ch211-10a23.2 ENSDARG00000060656 471 2.429 - - - 0.776 - 0.855 0.798 - - si:ch211-10a23.2 [Source:ZFIN;Acc:ZDB-GENE-090313-9]
58. nkx6.1 ENSDARG00000022569 3779 2.427 - - - 0.730 0.745 - 0.952 - - NK6 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040718-178]
59. LMTK3 LMTK3 222 2.414 - - - - - 0.850 0.848 0.716 -
60. adam23a ENSDARG00000062323 580 2.397 - - - 0.724 - 0.731 0.942 - - ADAM metallopeptidase domain 23a [Source:ZFIN;Acc:ZDB-GENE-070810-2]
61. adcyap1b ENSDARG00000027740 1539 2.391 - - - - - 0.740 0.891 0.760 - adenylate cyclase activating polypeptide 1b [Source:ZFIN;Acc:ZDB-GENE-041010-89]
62. zgc:109889 ENSDARG00000069600, ENSDARG00000113538 554 2.387 - - - - - 0.745 0.848 0.794 - zgc:109889 [Source:ZFIN;Acc:ZDB-GENE-050522-547]
63. stmn2b ENSDARG00000070537 1586 2.385 - - - 0.773 - 0.796 0.816 - - stathmin 2b [Source:ZFIN;Acc:ZDB-GENE-050522-207]
64. necab2 ENSDARG00000056745, ENSDARG00000110976 304 2.375 - - - - - 0.914 0.740 0.721 - N-terminal EF-hand calcium binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-050706-167]
65. ctbp1 ENSDARG00000057007, ENSDARG00000115804 5795 2.37 - - - 0.755 - 0.825 0.790 - - C-terminal binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-010130-1]
66. add2 ENSDARG00000074581 1402 2.37 - - - - - 0.715 0.940 0.715 - adducin 2 (beta) [Source:ZFIN;Acc:ZDB-GENE-080718-4]
67. ephb3a ENSDARG00000031548 1872 2.368 - - - 0.740 - 0.902 0.726 - - eph receptor B3a [Source:ZFIN;Acc:ZDB-GENE-990415-60]
68. CRIP2 ENSDARG00000070670 323 2.32 - - - - - 0.831 0.779 0.710 - cysteine-rich protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2889]
69. BSN BSN 463 2.319 - - - - - 0.889 0.700 0.730 -
70. GADD45G_1 GADD45G_1 236 2.305 - - - - - 0.801 0.755 0.749 -
71. celf3a ENSDARG00000034668 2432 2.29 - - - - - 0.813 0.750 0.727 - cugbp, Elav-like family member 3a [Source:ZFIN;Acc:ZDB-GENE-000501-2]
72. spock3 ENSDARG00000070266, ENSDARG00000110158 934 2.289 - 0.756 - - - 0.729 0.804 - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3 [Source:ZFIN;Acc:ZDB-GENE-090311-24]
73. zbtb18 ENSDARG00000028228 3653 2.279 - - - 0.811 - 0.748 - 0.720 - zinc finger and BTB domain containing 18 [Source:ZFIN;Acc:ZDB-GENE-050419-73]
74. msl2a ENSDARG00000038909 1357 2.241 - - - - - 0.768 0.740 0.733 - male-specific lethal 2 homolog a (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-070912-449]
75. lmo1 ENSDARG00000034504 260 2.238 - - - 0.745 - 0.774 0.719 - - LIM domain only 1 [Source:ZFIN;Acc:ZDB-GENE-021115-6]
76. coe2 coe2 1633 2.207 - - - - - 0.757 0.735 0.715 -
77. phf8 ENSDARG00000006584 476 2.189 - - - - - 0.710 0.741 0.738 - PHD finger protein 8 [Source:ZFIN;Acc:ZDB-GENE-060419-1]
78. hnrnpua ENSDARG00000015206 4012 1.965 - - 0.985 - - - - - 0.980 heterogeneous nuclear ribonucleoprotein Ua [Source:ZFIN;Acc:ZDB-GENE-030131-3731]
79. neurog1 ENSDARG00000056130 3924 1.955 - - - - - 0.972 0.983 - - neurogenin 1 [Source:ZFIN;Acc:ZDB-GENE-990415-174]
80. thoc2 ENSDARG00000037503 8711 1.948 - - 0.961 - 0.987 - - - - THO complex 2 [Source:ZFIN;Acc:ZDB-GENE-030616-54]
81. tfam ENSDARG00000063145 4524 1.942 - - 0.966 - - - - - 0.976 transcription factor A, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-061013-552]
82. nhlh2 ENSDARG00000025495 1860 1.938 - - - - - 0.963 0.975 - - nescient helix loop helix 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1809]
83. her15.1 ENSDARG00000054560, ENSDARG00000054562 1500 1.92 - - - - - 0.955 0.965 - - hairy and enhancer of split-related 15, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030707-2]
84. nova2 ENSDARG00000017673 7685 1.92 - - - - - 0.941 0.979 - - neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
85. calca ENSDARG00000056590 150 1.919 - - - - - 0.950 0.969 - - calcitonin/calcitonin-related polypeptide, alpha [Source:ZFIN;Acc:ZDB-GENE-040718-173]
86. AGO1 ENSDARG00000092644 4521 1.916 - - - - - 0.966 0.950 - - argonaute RISC catalytic component 1 [Source:ZFIN;Acc:ZDB-GENE-110606-3]
87. BX511121.1 ENSDARG00000029997 1774 1.908 - - - - - 0.953 0.955 - -
88. SPOCK1 ENSDARG00000074644 794 1.907 - - - - - 0.929 0.978 - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1 [Source:ZFIN;Acc:ZDB-GENE-110428-1]
89. ctnnd2b ENSDARG00000003779 964 1.904 - - - - - 0.935 0.969 - - catenin (cadherin-associated protein), delta 2b [Source:ZFIN;Acc:ZDB-GENE-070912-532]
90. stxbp1a ENSDARG00000001994 5154 1.904 0.938 - - - - - 0.966 - - syntaxin binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-050626-106]
91. cplx2 ENSDARG00000061918, ENSDARG00000111920 3673 1.904 - 0.921 - - - - 0.983 - - complexin 2 [Source:ZFIN;Acc:ZDB-GENE-081113-1]
92. fbxo41 ENSDARG00000078908 95 1.901 - - - - - 0.933 0.968 - - F-box protein 41 [Source:ZFIN;Acc:ZDB-GENE-090313-350]
93. slc8a2b ENSDARG00000100592 598 1.9 - - - - - 0.934 0.966 - - solute carrier family 8 (sodium/calcium exchanger), member 2b [Source:ZFIN;Acc:ZDB-GENE-050419-209]
94. slc18a3a ENSDARG00000006356 1285 1.897 - - - - - 0.913 0.984 - - solute carrier family 18 (vesicular acetylcholine transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-060929-990]
95. nes ENSDARG00000088805 2710 1.896 - - - - - 0.916 0.980 - - nestin [Source:ZFIN;Acc:ZDB-GENE-071119-2]
96. tmie ENSDARG00000069423 305 1.894 - - - - - 0.942 0.952 - - transmembrane inner ear [Source:ZFIN;Acc:ZDB-GENE-061207-9]
97. onecut1 ENSDARG00000007982, ENSDARG00000112251 6307 1.892 - - - - - 0.917 0.975 - - one cut homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1469]
98. tmem35 ENSDARG00000052567 5685 1.891 - - - - - 0.926 0.965 - - transmembrane protein 35 [Source:ZFIN;Acc:ZDB-GENE-030815-1]
99. chat chat 463 1.891 - - - - - 0.912 0.979 - -
100. APBB3 ENSDARG00000053771 654 1.889 - - - - - 0.919 0.970 - - amyloid beta (A4) precursor protein-binding, family B, member 3 [Source:ZFIN;Acc:ZDB-GENE-140106-53]

There are 2108 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA