Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for elavl1

Gene Name Gene ID Reads Annotation
elavl1 11672 ELAV like RNA binding protein 1, transcript variant X3










Genes with expression patterns similar to elavl1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. elavl1 11672 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ELAV like RNA binding protein 1, transcript variant X3
2. nucks1a ENSDARG00000078473 28285 3.601 - - 0.802 0.901 - 0.908 0.990 - - nuclear casein kinase and cyclin-dependent kinase substrate 1a [Source:ZFIN;Acc:ZDB-GENE-040912-175]
3. zeb2a ENSDARG00000062338, ENSDARG00000111349, ENSDARG00000115964 6087 3.517 - 0.974 - 0.958 - 0.715 - 0.870 - zinc finger E-box binding homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-070912-553]
4. ewsr1b ENSDARG00000020465, ENSDARG00000117011 10260 3.209 0.782 - 0.705 - 0.943 0.779 - - - EWS RNA-binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-030131-1600]
5. caprin1a ENSDARG00000009346, ENSDARG00000112212 9675 3.129 - - 0.733 - 0.778 0.806 - 0.812 - cell cycle associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-040801-226]
6. khdrbs1b ENSDARG00000070475 18157 2.874 - 0.987 - - - - 0.996 0.891 - KH domain containing, RNA binding, signal transduction associated 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2344]
7. prmt1 ENSDARG00000010246 11311 2.671 - - 0.889 0.940 - 0.842 - - - protein arginine methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-693]
8. ptprsa ENSDARG00000059738, ENSDARG00000110940 7232 2.605 - 0.981 - - 0.780 0.844 - - - protein tyrosine phosphatase, receptor type, s, a [Source:ZFIN;Acc:ZDB-GENE-020107-3]
9. zgc:77262 ENSDARG00000044545 5563 2.572 - - 0.714 0.961 - - - 0.897 - zgc:77262 [Source:ZFIN;Acc:ZDB-GENE-040426-1811]
10. pafah1b3 ENSDARG00000058047, ENSDARG00000105336, ENSDARG00000116495 8019 2.502 0.786 0.975 - - - 0.741 - - - platelet-activating factor acetylhydrolase, isoform Ib, gamma subunit [Source:ZFIN;Acc:ZDB-GENE-040426-1026]
11. seta ENSDARG00000031495 39977 2.49 - 0.769 - - - 0.812 - 0.909 - SET nuclear proto-oncogene a [Source:ZFIN;Acc:ZDB-GENE-030131-2221]
12. TNRC6C_2 TNRC6C_2 2444 2.479 - - 0.779 - - 0.759 - 0.941 -
13. id3 ENSDARG00000054823 3484 2.469 - 0.884 - - - - - 0.884 0.701 inhibitor of DNA binding 3 [Source:ZFIN;Acc:ZDB-GENE-020515-1]
14. prp19 prp19 4804 2.449 0.738 - - - - 0.773 - 0.938 -
15. CWC15 ENSDARG00000013382 8969 2.436 - - - - 0.794 0.837 - - 0.805 CWC15 spliceosome-associated protein homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040625-10]
16. kif11 ENSDARG00000010948 4973 2.43 - - 0.792 - 0.839 0.799 - - - kinesin family member 11 [Source:ZFIN;Acc:ZDB-GENE-020426-1]
17. klc2 3058 2.413 - - - - 0.816 0.800 - - 0.797 kinesin light chain 2
18. snrpf ENSDARG00000105037 10241 2.402 - - - - - 0.786 - 0.793 0.823 small nuclear ribonucleoprotein polypeptide F [Source:ZFIN;Acc:ZDB-GENE-040930-9]
19. psmc4 ENSDARG00000027099, ENSDARG00000109415 6643 2.393 - - 0.767 - - 0.864 - - 0.762 proteasome 26S subunit, ATPase 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5083]
20. hdac1 ENSDARG00000015427 19804 2.375 - - 0.750 - - 0.858 - 0.767 - histone deacetylase 1 [Source:ZFIN;Acc:ZDB-GENE-020419-32]
21. schip1 ENSDARG00000035175 3838 2.353 - - - - - 0.798 - 0.852 0.703 schwannomin interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-050417-466]
22. tmpob ENSDARG00000022978 8121 2.331 - - 0.729 - - 0.720 - 0.882 - thymopoietin b [Source:ZFIN;Acc:ZDB-GENE-050522-8]
23. CPEB2 ENSDARG00000052604 2646 2.318 - - - - 0.778 0.710 - - 0.830 cytoplasmic polyadenylation element binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-130530-639]
24. smc1al ENSDARG00000058203 8838 2.317 - - 0.720 - 0.809 0.788 - - - structural maintenance of chromosomes 1A, like [Source:ZFIN;Acc:ZDB-GENE-040426-57]
25. apex1 ENSDARG00000045843 6345 2.309 - - 0.713 - 0.826 0.770 - - - APEX nuclease (multifunctional DNA repair enzyme) 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2761]
26. hmgb1b ENSDARG00000030479 10398 2.308 - - 0.761 - - 0.779 - 0.768 - high mobility group box 1b [Source:ZFIN;Acc:ZDB-GENE-030131-8480]
27. SERBP1 SERBP1 9276 2.301 0.780 - - - - 0.820 - - 0.701
28. eif3g ENSDARG00000016889 10367 2.3 - - - - - 0.735 - 0.787 0.778 eukaryotic translation initiation factor 3, subunit G [Source:ZFIN;Acc:ZDB-GENE-040426-1076]
29. srsf7a ENSDARG00000035325, ENSDARG00000110705 11788 2.296 - - 0.773 - 0.785 0.738 - - - serine/arginine-rich splicing factor 7a [Source:ZFIN;Acc:ZDB-GENE-040426-1798]
30. nrarpb ENSDARG00000018958 6225 2.24 - - - - 0.744 0.747 - 0.749 - NOTCH regulated ankyrin repeat protein b [Source:ZFIN;Acc:ZDB-GENE-030515-7]
31. ckap5 ENSDARG00000102674 5068 2.195 0.746 - 0.715 - - 0.734 - - - cytoskeleton associated protein 5 [Source:ZFIN;Acc:ZDB-GENE-051120-174]
32. eif5 ENSDARG00000003681 7986 1.975 - 0.978 - - - - 0.997 - - eukaryotic translation initiation factor 5 [Source:ZFIN;Acc:ZDB-GENE-030131-975]
33. cox7a2a ENSDARG00000053217 12564 1.955 - 0.963 - - - - 0.992 - - cytochrome c oxidase subunit 7A2a [Source:ZFIN;Acc:ZDB-GENE-050522-153]
34. ddx6 ENSDARG00000061338 2514 1.899 - 0.973 - - - - - 0.926 - DEAD (Asp-Glu-Ala-Asp) box helicase 6 [Source:ZFIN;Acc:ZDB-GENE-070912-83]
35. hif1al ENSDARG00000100826 18627 1.899 - 0.943 - 0.956 - - - - - hypoxia inducible factor 1 subunit alpha, like [Source:ZFIN;Acc:ZDB-GENE-040426-1315]
36. ap2b1 ENSDARG00000035152 2912 1.882 - 0.969 - - - - - 0.913 - adaptor related protein complex 2 subunit beta 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6564]
37. wu:fj13e08 1223 1.881 - - - 0.949 - - - 0.932 - wu:fj13e08
38. hnrnph1l ENSDARG00000005551 8727 1.867 - - - - 0.878 - 0.989 - - heterogeneous nuclear ribonucleoprotein H1, like [Source:ZFIN;Acc:ZDB-GENE-030131-275]
39. elmod2 ENSDARG00000101669 3101 1.862 - - - 0.955 - - - 0.907 - ELMO/CED-12 domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060824-2]
40. eif4ba ENSDARG00000017439, ENSDARG00000117080 1882 1.84 - - - 0.944 - - - 0.896 - eukaryotic translation initiation factor 4Ba [Source:ZFIN;Acc:ZDB-GENE-060629-1]
41. stmn1a ENSDARG00000004169 21169 1.84 - - - 0.947 0.893 - - - - stathmin 1a [Source:ZFIN;Acc:ZDB-GENE-031006-14]
42. hp1bp3 ENSDARG00000044669 23708 1.84 - - - 0.949 - 0.891 - - - heterochromatin protein 1, binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-060810-79]
43. hoxc6a ENSDARG00000070343 2839 1.814 - - - - - 0.816 0.998 - - homeobox C6a [Source:ZFIN;Acc:ZDB-GENE-990415-113]
44. ccng2 ENSDARG00000017602 3141 1.811 - 0.975 - - - - - - 0.836 cyclin G2 [Source:ZFIN;Acc:ZDB-GENE-021016-1]
45. psmd14 ENSDARG00000063100 15711 1.81 - - - - - 0.814 0.996 - - proteasome 26S subunit, non-ATPase 14 [Source:ZFIN;Acc:ZDB-GENE-070410-56]
46. axin1 ENSDARG00000102964 1710 1.805 - 0.970 - - - - - - 0.835 axin 1 [Source:ZFIN;Acc:ZDB-GENE-000403-1]
47. bckdha ENSDARG00000040555, ENSDARG00000111762 7620 1.799 - 0.974 - - - - - 0.825 - branched chain keto acid dehydrogenase E1, alpha polypeptide [Source:ZFIN;Acc:ZDB-GENE-050522-376]
48. calb2b ENSDARG00000036344 2417 1.798 - - - - - 0.802 0.996 - - calbindin 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1668]
49. wu:fb17g07 wu:fb17g07 10567 1.791 - - - 0.962 - 0.829 - - -
50. cnn3b ENSDARG00000029856 4807 1.788 - 0.969 - - - 0.819 - - - calponin 3, acidic b [Source:ZFIN;Acc:ZDB-GENE-050522-263]
51. npm1b ENSDARG00000037675 5448 1.782 - 0.979 - - - 0.803 - - - nucleophosmin 1b [Source:ZFIN;Acc:ZDB-GENE-080723-7]
52. hnrnpul1 ENSDARG00000040564 6550 1.77 - 0.982 - 0.788 - - - - - heterogeneous nuclear ribonucleoprotein U-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2432]
53. supt16h ENSDARG00000079949 4755 1.77 - - - 0.970 0.800 - - - - SPT16 homolog, facilitates chromatin remodeling subunit [Source:ZFIN;Acc:ZDB-GENE-031118-96]
54. prkcea ENSDARG00000003008 1118 1.769 - 0.969 - - - 0.800 - - - protein kinase C, epsilon a [Source:ZFIN;Acc:ZDB-GENE-030131-8191]
55. lmnb1 ENSDARG00000044299 9817 1.769 - - - 0.948 - 0.821 - - - lamin B1 [Source:ZFIN;Acc:ZDB-GENE-020424-2]
56. mcm5 ENSDARG00000019507 6407 1.768 - - - - - - 0.999 0.769 - minichromosome maintenance complex component 5 [Source:ZFIN;Acc:ZDB-GENE-021209-1]
57. mllt10 ENSDARG00000045401 7557 1.768 - - - 0.956 - 0.812 - - - MLLT10, histone lysine methyltransferase DOT1L cofactor [Source:ZFIN;Acc:ZDB-GENE-041114-176]
58. creb1a ENSDARG00000053586 5068 1.763 - - - 0.954 - 0.809 - - - cAMP responsive element binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-040426-750]
59. irx5a ENSDARG00000034043 1694 1.761 - - - - 0.807 - - 0.954 - iroquois homeobox 5a [Source:ZFIN;Acc:ZDB-GENE-010716-2]
60. spen ENSDARG00000074245, ENSDARG00000116696 3054 1.761 - - - - - 0.764 0.997 - - spen family transcriptional repressor [Source:ZFIN;Acc:ZDB-GENE-050309-70]
61. hoxa5a ENSDARG00000102501 1667 1.751 - 0.967 - - - 0.784 - - - homeobox A5a [Source:ZFIN;Acc:ZDB-GENE-000823-9]
62. sipa1l2 ENSDARG00000061640 4545 1.745 - - - - - 0.748 0.997 - - signal-induced proliferation-associated 1 like 2 [Source:ZFIN;Acc:ZDB-GENE-050208-66]
63. pmp22a ENSDARG00000105223, ENSDARG00000115339 9849 1.743 - - - - 0.767 - 0.976 - - peripheral myelin protein 22a [Source:ZFIN;Acc:ZDB-GENE-030131-6757]
64. dido1 ENSDARG00000057940 3819 1.743 - 0.979 - - 0.764 - - - - death inducer-obliterator 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6117]
65. glrx5 ENSDARG00000043665 2687 1.742 - 0.981 - - - - - - 0.761 glutaredoxin 5 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-1957]
66. mapk6 ENSDARG00000032103 6422 1.736 - - - - - 0.829 - 0.907 - mitogen-activated protein kinase 6 [Source:ZFIN;Acc:ZDB-GENE-050420-7]
67. eif4g2a ENSDARG00000020377, ENSDARG00000112658 6895 1.735 - 0.975 - - - 0.760 - - - eukaryotic translation initiation factor 4, gamma 2a [Source:ZFIN;Acc:ZDB-GENE-030131-2173]
68. xylt1 ENSDARG00000061248 2357 1.734 - - - - - - - 0.921 0.813 xylosyltransferase I [Source:ZFIN;Acc:ZDB-GENE-111017-2]
69. khsrp ENSDARG00000026489 15738 1.73 - - - - - 0.889 - 0.841 - KH-type splicing regulatory protein [Source:ZFIN;Acc:ZDB-GENE-030131-4357]
70. chaf1a ENSDARG00000062152, ENSDARG00000114749 5342 1.722 - - - 0.972 - 0.750 - - - chromatin assembly factor 1, subunit A (p150) [Source:ZFIN;Acc:ZDB-GENE-030131-5366]
71. basp1 ENSDARG00000053358, ENSDARG00000110677 2590 1.72 - - - - - 0.823 - 0.897 - brain abundant, membrane attached signal protein 1 [Source:ZFIN;Acc:ZDB-GENE-070424-158]
72. ep300b ENSDARG00000061108 5173 1.718 - - - - - 0.770 - 0.948 - E1A binding protein p300 b [Source:ZFIN;Acc:ZDB-GENE-080403-15]
73. SH3BGRL ENSDARG00000058302 4525 1.718 - - - 0.947 0.771 - - - - SH3 domain binding glutamate-rich protein like [Source:ZFIN;Acc:ZDB-GENE-040426-1376]
74. oaz1b ENSDARG00000104782 37623 1.714 - 0.857 - - - - 0.857 - - ornithine decarboxylase antizyme 1b [Source:ZFIN;Acc:ZDB-GENE-020731-5]
75. sdcbp2 ENSDARG00000012513, ENSDARG00000113289, ENSDARG00000115159 6359 1.711 - - - 0.961 - 0.750 - - - syndecan binding protein (syntenin) 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3727]
76. cbx5 ENSDARG00000061187 24026 1.71 - 0.936 - - - 0.774 - - - chromobox homolog 5 (HP1 alpha homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-5553]
77. psmb3 ENSDARG00000013938 10744 1.708 - - - - - 0.709 0.999 - - proteasome subunit beta 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2682]
78. eif4e1c ENSDARG00000012274, ENSDARG00000116158 4768 1.707 - - - 0.958 - 0.749 - - - eukaryotic translation initiation factor 4E family member 1c [Source:ZFIN;Acc:ZDB-GENE-050417-398]
79. arrdc3b ENSDARG00000036028 3157 1.706 - 0.966 - - - 0.740 - - - arrestin domain containing 3b [Source:ZFIN;Acc:ZDB-GENE-040912-182]
80. rps11 ENSDARG00000053058 16233 1.706 - - - - 0.713 - 0.993 - - ribosomal protein S11 [Source:ZFIN;Acc:ZDB-GENE-040426-2701]
81. ddx39ab ENSDARG00000015111 11619 1.705 - - - - - 0.825 - 0.880 - DEAD (Asp-Glu-Ala-Asp) box polypeptide 39Ab [Source:ZFIN;Acc:ZDB-GENE-040426-2902]
82. rbm8a ENSDARG00000016516 8789 1.704 - 0.903 - - - - - - 0.801 RNA binding motif protein 8A [Source:ZFIN;Acc:ZDB-GENE-050306-51]
83. NAT16 ENSDARG00000086222 4682 1.703 - - - - - 0.784 - 0.919 - N-acetyltransferase 16 [Source:ZFIN;Acc:ZDB-GENE-030219-43]
84. mapre1b ENSDARG00000002659 9119 1.701 - - - 0.948 - 0.753 - - - microtubule-associated protein, RP/EB family, member 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2256]
85. onecutl ENSDARG00000040253 2143 1.701 - - - - - 0.763 - 0.938 - one cut domain, family member, like [Source:ZFIN;Acc:ZDB-GENE-020531-1]
86. pacsin1b ENSDARG00000042128 1051 1.699 - - - - - 0.749 - 0.950 - protein kinase C and casein kinase substrate in neurons 1b [Source:ZFIN;Acc:ZDB-GENE-050913-35]
87. sncb ENSDARG00000104945 8197 1.699 - - - 0.958 - 0.741 - - - synuclein, beta [Source:ZFIN;Acc:ZDB-GENE-040426-1615]
88. ube2v1 ENSDARG00000041875 5739 1.699 - 0.982 - - - - - - 0.717 ubiquitin-conjugating enzyme E2 variant 1 [Source:ZFIN;Acc:ZDB-GENE-051030-102]
89. tra2a ENSDARG00000007863 4449 1.69 - 0.967 - - - - - 0.723 - transformer 2 alpha homolog [Source:ZFIN;Acc:ZDB-GENE-040426-1391]
90. tet3 ENSDARG00000062646 6672 1.688 - - - - - - - 0.935 0.753 tet methylcytosine dioxygenase 3 [Source:ZFIN;Acc:ZDB-GENE-060526-109]
91. zgc:158409 zgc:158409 21963 1.686 - - - - - 0.816 - 0.870 -
92. prss35 ENSDARG00000100691, ENSDARG00000109353 2333 1.684 - - - 0.950 - 0.734 - - - protease, serine, 35 [Source:ZFIN;Acc:ZDB-GENE-040704-55]
93. ddx19 ENSDARG00000005699 4602 1.682 - - 0.776 - - 0.906 - - - DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 19 (DBP5 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-020419-30]
94. btg3 ENSDARG00000069065, ENSDARG00000115730 1632 1.682 - - - - - 0.740 - 0.942 - B-cell translocation gene 3 [Source:ZFIN;Acc:ZDB-GENE-031113-19]
95. meis3 ENSDARG00000002795 2509 1.676 - - - 0.946 - 0.730 - - - myeloid ecotropic viral integration site 3 [Source:ZFIN;Acc:ZDB-GENE-010406-2]
96. CYTH2 ENSDARG00000028800 2349 1.674 - - - - - 0.710 - 0.964 - cytohesin 2 [Source:HGNC Symbol;Acc:HGNC:9502]
97. dpf2l ENSDARG00000037291, ENSDARG00000112198 2353 1.673 - - 0.713 - - - - 0.960 - D4, zinc and double PHD fingers family 2, like [Source:ZFIN;Acc:ZDB-GENE-030131-5132]
98. cse1l ENSDARG00000006963 3261 1.66 - - 0.754 - - - - 0.906 - CSE1 chromosome segregation 1-like (yeast) [Source:ZFIN;Acc:ZDB-GENE-990603-1]
99. itgb1bp1 ENSDARG00000007169 2723 1.657 - 0.891 - - 0.766 - - - - integrin beta 1 binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-051113-264]
100. zfand3 ENSDARG00000052833 2682 1.656 - - - - - 0.767 - - 0.889 zinc finger, AN1-type domain 3 [Source:ZFIN;Acc:ZDB-GENE-050706-134]

There are 1455 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA