Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for eif3d

Gene Name Gene ID Reads Annotation
eif3d ENSDARG00000021257 1524 eukaryotic translation initiation factor 3, subunit D [Source:ZFIN;Acc:ZDB-GENE-030131-8442]










Genes with expression patterns similar to eif3d

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. eif3d ENSDARG00000021257 1524 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 eukaryotic translation initiation factor 3, subunit D [Source:ZFIN;Acc:ZDB-GENE-030131-8442]
2. suv420h2 2186 1.88 - - - 0.894 0.986 - - - - suppressor of variegation 4-20 homolog 2 (Drosophila)
3. nkx2.3 ENSDARG00000039095, ENSDARG00000113490 493 1.857 - - - 0.861 0.996 - - - - NK2 homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-990415-178]
4. atp1b4 ENSDARG00000053262 1337 1.847 - - - 0.851 0.996 - - - - ATPase Na+/K+ transporting subunit beta 4 [Source:ZFIN;Acc:ZDB-GENE-070412-1]
5. exosc10 ENSDARG00000037708, ENSDARG00000115953 1121 1.8 - - - 0.804 0.996 - - - - exosome component 10 [Source:ZFIN;Acc:ZDB-GENE-040426-781]
6. znf280d ENSDARG00000077013 1387 1.779 - - - - 0.994 - 0.785 - - zinc finger protein 280D [Source:ZFIN;Acc:ZDB-GENE-030131-2260]
7. col11a1b ENSDARG00000009014 9998 1.742 - - - - 0.992 - 0.750 - - collagen, type XI, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-070912-607]
8. CXXC5 CXXC5 1332 1.738 - - - 0.855 - - 0.883 - -
9. mtor ENSDARG00000053196 2156 1.738 - - - 0.744 0.994 - - - - mechanistic target of rapamycin kinase [Source:ZFIN;Acc:ZDB-GENE-030131-2974]
10. BAZ1A ENSDARG00000063233, ENSDARG00000099745 1432 1.737 - - - - 0.992 - 0.745 - - bromodomain adjacent to zinc finger domain, 1A [Source:ZFIN;Acc:ZDB-GENE-030131-6105]
11. anapc7 ENSDARG00000063005 1139 1.729 - - - 0.890 - - - 0.839 - anaphase promoting complex subunit 7 [Source:ZFIN;Acc:ZDB-GENE-081104-113]
12. ube2a ENSDARG00000098466 12765 1.719 - - - - 0.925 - 0.794 - - ubiquitin-conjugating enzyme E2A (RAD6 homolog) [Source:ZFIN;Acc:ZDB-GENE-030616-72]
13. cuedc1b ENSDARG00000054748 1638 1.716 - - - 0.724 0.992 - - - - CUE domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-070424-29]
14. irf2bp2a ENSDARG00000004702 6719 1.709 - 0.761 - - 0.948 - - - - interferon regulatory factor 2 binding protein 2a [Source:ZFIN;Acc:ZDB-GENE-030131-7809]
15. slc20a1b ENSDARG00000010641 2564 1.704 - - - - 0.994 - 0.710 - - solute carrier family 20 (phosphate transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-030131-260]
16. si:dkey-251i10.2 ENSDARG00000093957 4424 1.698 - - - - 0.995 - 0.703 - - si:dkey-251i10.2 [Source:ZFIN;Acc:ZDB-GENE-050506-102]
17. fbxw2 ENSDARG00000009745 618 1.695 - - - 0.870 - - - 0.825 - F-box and WD repeat domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-050522-303]
18. ck2a1 ck2a1 3749 1.693 - - - - 0.981 0.712 - - -
19. vat1 ENSDARG00000056481, ENSDARG00000111382 7389 1.689 - - - - 0.978 - 0.711 - - vesicle amine transport 1 [Source:ZFIN;Acc:ZDB-GENE-030616-178]
20. inip ENSDARG00000028523 1925 1.675 - - - 0.910 - - 0.765 - - ints3 and nabp interacting protein [Source:ZFIN;Acc:ZDB-GENE-040426-961]
21. smc2 ENSDARG00000017744, ENSDARG00000114076 2271 1.666 - - - 0.856 - - 0.810 - - structural maintenance of chromosomes 2 [Source:ZFIN;Acc:ZDB-GENE-030131-105]
22. znf207a ENSDARG00000015538 2630 1.665 - 0.703 - - 0.962 - - - - zinc finger protein 207, a [Source:ZFIN;Acc:ZDB-GENE-040426-2273]
23. mdh2 ENSDARG00000043371 14485 1.659 - - - - 0.922 - 0.737 - - malate dehydrogenase 2, NAD (mitochondrial) [Source:ZFIN;Acc:ZDB-GENE-040426-2143]
24. hadhb ENSDARG00000102055 9700 1.637 - - - - 0.927 - 0.710 - - hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit beta [Source:ZFIN;Acc:ZDB-GENE-030131-8550]
25. znf292b ENSDARG00000043973 3791 1.621 - - - - 0.831 - 0.790 - - zinc finger protein 292b [Source:ZFIN;Acc:ZDB-GENE-030131-9559]
26. prrc2a ENSDARG00000031494 2217 1.62 - 0.834 - 0.786 - - - - - proline-rich coiled-coil 2A [Source:ZFIN;Acc:ZDB-GENE-010501-4]
27. dnajc18 ENSDARG00000056005 8084 1.612 - - - 0.863 - - 0.749 - - DnaJ (Hsp40) homolog, subfamily C, member 18 [Source:ZFIN;Acc:ZDB-GENE-030131-8019]
28. rprd2b ENSDARG00000074676 809 1.61 - 0.772 - 0.838 - - - - - regulation of nuclear pre-mRNA domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-110719-1]
29. si:dkey-219c3.2 ENSDARG00000075805 619 1.607 - - - 0.884 - - 0.723 - - si:dkey-219c3.2 [Source:ZFIN;Acc:ZDB-GENE-090313-238]
30. rrp15 ENSDARG00000013478 1126 1.603 - 0.753 - - - - - 0.850 - ribosomal RNA processing 15 homolog [Source:ZFIN;Acc:ZDB-GENE-030131-5261]
31. l3mbtl2 ENSDARG00000056079, ENSDARG00000116037 1645 1.601 - - - 0.878 - - - 0.723 - l(3)mbt-like 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-8713]
32. pcm1 ENSDARG00000062198, ENSDARG00000112178 2912 1.594 - - - - 0.839 0.755 - - - pericentriolar material 1 [Source:ZFIN;Acc:ZDB-GENE-030131-428]
33. scoca ENSDARG00000087333 1739 1.592 - - - 0.833 - - 0.759 - - short coiled-coil protein a [Source:ZFIN;Acc:ZDB-GENE-061013-114]
34. plagx ENSDARG00000036855 3768 1.59 - - - 0.861 - - 0.729 - - pleiomorphic adenoma gene X [Source:ZFIN;Acc:ZDB-GENE-030131-839]
35. pak2b ENSDARG00000018476 4331 1.582 - 0.782 - - - - 0.800 - - p21 protein (Cdc42/Rac)-activated kinase 2b [Source:ZFIN;Acc:ZDB-GENE-030131-3759]
36. pmpca ENSDARG00000102607 1024 1.579 - - - - - 0.815 0.764 - - peptidase (mitochondrial processing) alpha [Source:ZFIN;Acc:ZDB-GENE-030131-5809]
37. slc5a3b ENSDARG00000077812 153 1.578 - - - 0.877 - - 0.701 - - solute carrier family 5 (sodium/myo-inositol cotransporter), member 3b [Source:ZFIN;Acc:ZDB-GENE-070912-43]
38. CABZ01085858.1 CABZ01085858.1 355 1.578 - - - 0.851 - - - 0.727 -
39. dnajc5ab ENSDARG00000004836 2923 1.574 - 0.704 - 0.870 - - - - - DnaJ (Hsp40) homolog, subfamily C, member 5ab [Source:ZFIN;Acc:ZDB-GENE-081021-2]
40. samm50 ENSDARG00000045814 4511 1.567 - 0.768 - - - 0.799 - - - SAMM50 sorting and assembly machinery component [Source:ZFIN;Acc:ZDB-GENE-040426-806]
41. zeb1b ENSDARG00000013207, ENSDARG00000113922 2571 1.566 - 0.773 - - - - 0.793 - - zinc finger E-box binding homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-010621-1]
42. nr6a1b ENSDARG00000014480 575 1.552 - 0.744 - 0.808 - - - - - nuclear receptor subfamily 6, group A, member 1b [Source:ZFIN;Acc:ZDB-GENE-040724-202]
43. gnai1 ENSDARG00000021647 1548 1.55 - 0.793 - - - 0.757 - - - guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1310]
44. kpna5 ENSDARG00000042030 1643 1.548 - - - 0.773 - - 0.775 - - karyopherin alpha 5 (importin alpha 6) [Source:ZFIN;Acc:ZDB-GENE-050522-22]
45. pik3c3 ENSDARG00000054829 559 1.546 - - - 0.789 - - 0.757 - - phosphatidylinositol 3-kinase, catalytic subunit type 3 [Source:ZFIN;Acc:ZDB-GENE-050410-13]
46. u2af2a ENSDARG00000012505 2920 1.543 - 0.762 - 0.781 - - - - - U2 small nuclear RNA auxiliary factor 2a [Source:ZFIN;Acc:ZDB-GENE-050706-131]
47. mrps33 ENSDARG00000020015 3551 1.543 - - - 0.833 - - 0.710 - - mitochondrial ribosomal protein S33 [Source:ZFIN;Acc:ZDB-GENE-040715-6]
48. mrpl44 ENSDARG00000094277 1778 1.54 - - - 0.829 - - 0.711 - - mitochondrial ribosomal protein L44 [Source:ZFIN;Acc:ZDB-GENE-050913-59]
49. cul2 ENSDARG00000013965 1407 1.533 - 0.729 - - - - 0.804 - - cullin 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8032]
50. AL954696.1 ENSDARG00000078442 768 1.533 - - - 0.745 - - - 0.788 - NOP9 nucleolar protein [Source:NCBI gene;Acc:100332577]
51. znf865 ENSDARG00000036698 15532 1.527 - 0.808 - - - - 0.719 - - zinc finger protein 865 [Source:ZFIN;Acc:ZDB-GENE-060503-896]
52. zfand1 ENSDARG00000009178, ENSDARG00000114617 1192 1.525 - 0.748 - 0.777 - - - - - zinc finger, AN1-type domain 1 [Source:ZFIN;Acc:ZDB-GENE-040801-269]
53. ubr5 ENSDARG00000018192 9267 1.52 - 0.729 - - 0.791 - - - - ubiquitin protein ligase E3 component n-recognin 5 [Source:ZFIN;Acc:ZDB-GENE-030131-6559]
54. g3bp1 ENSDARG00000017741 7622 1.513 - 0.703 - - - - 0.810 - - GTPase activating protein (SH3 domain) binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7452]
55. RNF169 ENSDARG00000042825 727 1.511 - - - 0.779 - - 0.732 - - ring finger protein 169 [Source:ZFIN;Acc:ZDB-GENE-030131-4336]
56. dnaja3a ENSDARG00000058494, ENSDARG00000111151 2497 1.51 - 0.809 - - - - 0.701 - - DnaJ (Hsp40) homolog, subfamily A, member 3A [Source:ZFIN;Acc:ZDB-GENE-030131-7837]
57. MRPL52 ENSDARG00000090568 4402 1.508 - - - 0.783 - - 0.725 - - mitochondrial ribosomal protein L52 [Source:ZFIN;Acc:ZDB-GENE-110325-1]
58. sf3a3 ENSDARG00000100114 4511 1.503 - 0.745 - - - - 0.758 - - splicing factor 3a, subunit 3 [Source:ZFIN;Acc:ZDB-GENE-040908-1]
59. MRPS12_1 MRPS12_1 2714 1.496 - 0.707 - - - - 0.789 - -
60. tardbp ENSDARG00000040031, ENSDARG00000115667 13815 1.494 - - - 0.778 - - 0.716 - - TAR DNA binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-3777]
61. ndufa8 ENSDARG00000058041, ENSDARG00000111900 5493 1.48 - - - - - 0.771 0.709 - - NADH:ubiquinone oxidoreductase subunit A8 [Source:ZFIN;Acc:ZDB-GENE-040426-1688]
62. lypla2 ENSDARG00000053656 8971 1.48 - 0.752 - - - - 0.728 - - lysophospholipase II [Source:ZFIN;Acc:ZDB-GENE-040426-1715]
63. abcf2a ENSDARG00000038785 2065 1.479 - 0.727 - - - - 0.752 - - ATP-binding cassette, sub-family F (GCN20), member 2a [Source:ZFIN;Acc:ZDB-GENE-030131-8714]
64. txn2 ENSDARG00000034777 4071 1.478 - 0.729 - - - - 0.749 - - thioredoxin 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1795]
65. lbx2 ENSDARG00000025131 1388 1.477 - - - 0.744 - - 0.733 - - ladybird homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-001206-2]
66. timm10b ENSDARG00000043898 1233 1.477 - 0.719 - - - - - 0.758 - translocase of inner mitochondrial membrane 10 homolog B (yeast) [Source:ZFIN;Acc:ZDB-GENE-050417-370]
67. atp5h 18018 1.473 - 0.738 - - - 0.735 - - - ATP synthase, H+ transporting, mitochondrial Fo complex, subunit d, transcript variant X1
68. ubl3b ENSDARG00000021556 1210 1.473 - - - 0.760 - - 0.713 - - ubiquitin-like 3b [Source:ZFIN;Acc:ZDB-GENE-040630-4]
69. kpnb3 ENSDARG00000040245 7967 1.468 - 0.761 - - - - 0.707 - - karyopherin (importin) beta 3 [Source:ZFIN;Acc:ZDB-GENE-030424-2]
70. iars ENSDARG00000007955 1363 1.465 - 0.763 - 0.702 - - - - - isoleucyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-6325]
71. mcl1a ENSDARG00000009779 2058 1.458 - 0.756 - - - - - 0.702 - MCL1, BCL2 family apoptosis regulator a [Source:ZFIN;Acc:ZDB-GENE-000511-7]
72. aldh6a1 ENSDARG00000053485 7744 1.448 - 0.719 - 0.729 - - - - - aldehyde dehydrogenase 6 family, member A1 [Source:ZFIN;Acc:ZDB-GENE-030131-9192]
73. PTP4A3 ENSDARG00000039997 3814 1.444 - 0.709 - - - - 0.735 - - protein tyrosine phosphatase type IVA, member 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2220]
74. sulf1 ENSDARG00000038428 2748 1.444 - 0.723 - - - - 0.721 - - sulfatase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9242]
75. dnajc25 ENSDARG00000067613, ENSDARG00000111375 1435 1.444 - - - 0.731 - - - 0.713 - DnaJ (Hsp40) homolog, subfamily C , member 25 [Source:ZFIN;Acc:ZDB-GENE-081104-137]
76. trap1 ENSDARG00000024317, ENSDARG00000114173 2189 1.44 - - - - - 0.733 0.707 - - TNF receptor-associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4257]
77. asb12b ENSDARG00000037558, ENSDARG00000113049, ENSDARG00000116721 378 1.44 - - - - - - 0.715 0.725 - ankyrin repeat and SOCS box-containing 12b [Source:ZFIN;Acc:ZDB-GENE-040822-25]
78. puf60a ENSDARG00000032175 5618 1.437 - 0.734 - - - - 0.703 - - poly-U binding splicing factor a [Source:ZFIN;Acc:ZDB-GENE-030131-2891]
79. bcs1l ENSDARG00000012295 664 1.431 - - - 0.705 - - 0.726 - - BC1 (ubiquinol-cytochrome c reductase) synthesis-like [Source:ZFIN;Acc:ZDB-GENE-040426-938]
80. mrps16 ENSDARG00000098972, ENSDARG00000115452 2085 1.426 - 0.715 - - - 0.711 - - - mitochondrial ribosomal protein S16 [Source:ZFIN;Acc:ZDB-GENE-041010-123]
81. peli1b ENSDARG00000044083, ENSDARG00000112797 3801 1.421 - - - 0.702 - - 0.719 - - pellino E3 ubiquitin protein ligase 1b [Source:ZFIN;Acc:ZDB-GENE-061027-372]
82. sms ENSDARG00000008155 1192 1.41 - - - 0.703 - - 0.707 - - spermine synthase [Source:ZFIN;Acc:ZDB-GENE-040625-150]
83. ubr3 ENSDARG00000042508 738 1.41 - - - - - - 0.703 0.707 - ubiquitin protein ligase E3 component n-recognin 3 [Source:ZFIN;Acc:ZDB-GENE-030131-1473]
84. usp40 ENSDARG00000071197 825 0.996 - - - - 0.996 - - - - ubiquitin specific peptidase 40 [Source:ZFIN;Acc:ZDB-GENE-060518-5]
85. adcyap1b ENSDARG00000027740 1539 0.996 - - - - 0.996 - - - - adenylate cyclase activating polypeptide 1b [Source:ZFIN;Acc:ZDB-GENE-041010-89]
86. sptlc1 ENSDARG00000042995, ENSDARG00000112519 1291 0.996 - - - - 0.996 - - - - serine palmitoyltransferase, long chain base subunit 1 [Source:ZFIN;Acc:ZDB-GENE-050522-61]
87. il12rb2l ENSDARG00000074850 407 0.996 - - - - 0.996 - - - - interleukin 12 receptor, beta 2a, like [Source:ZFIN;Acc:ZDB-GENE-080107-6]
88. sh3bp5a ENSDARG00000100529 642 0.996 - - - - 0.996 - - - - SH3-domain binding protein 5a (BTK-associated) [Source:ZFIN;Acc:ZDB-GENE-111111-2]
89. SNORA70 SNORA70 511 0.996 - - - - 0.996 - - - -
90. CABZ01027552.1 CABZ01027552.1 760 0.996 - - - - 0.996 - - - -
91. USP2_1 USP2_1 544 0.996 - - - - 0.996 - - - -
92. armc9 ENSDARG00000087299 459 0.996 - - - - 0.996 - - - - armadillo repeat containing 9 [Source:ZFIN;Acc:ZDB-GENE-100922-67]
93. otx2 766 0.996 - - - - 0.996 - - - - orthodenticle homeobox 2, transcript variant X2
94. cdkn1a ENSDARG00000076554 591 0.995 - - - - 0.995 - - - - cyclin-dependent kinase inhibitor 1A [Source:ZFIN;Acc:ZDB-GENE-070705-7]
95. ccdc53 982 0.995 - - - - 0.995 - - - - coiled-coil domain containing 53
96. si:ch211-197h24.6 ENSDARG00000091631 1933 0.995 - - - - 0.995 - - - - si:ch211-197h24.6 [Source:ZFIN;Acc:ZDB-GENE-030131-1361]
97. ticrr ENSDARG00000045605 739 0.995 - - - - 0.995 - - - - TopBP1-interacting, checkpoint, and replication regulator [Source:ZFIN;Acc:ZDB-GENE-040728-1]
98. ESCO1 ENSDARG00000077057 1112 0.995 - - - - 0.995 - - - - establishment of sister chromatid cohesion N-acetyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-130530-818]
99. rnaseh1 ENSDARG00000042571 922 0.995 - - - - 0.995 - - - - ribonuclease H1 [Source:ZFIN;Acc:ZDB-GENE-040718-407]
100. thoc7 ENSDARG00000015394 3824 0.995 - - - - 0.995 - - - - THO complex 7 [Source:ZFIN;Acc:ZDB-GENE-040801-17]

There are 1401 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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