Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for ehd3

Gene Name Gene ID Reads Annotation
ehd3 ENSDARG00000007869 3238 EH-domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-041014-352]










Genes with expression patterns similar to ehd3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ehd3 ENSDARG00000007869 3238 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 EH-domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-041014-352]
2. flot2a ENSDARG00000004830 5276 2.68 0.848 0.939 - - 0.893 - - - - flotillin 2a [Source:ZFIN;Acc:ZDB-GENE-020430-3]
3. ufm1 ENSDARG00000043857 4152 2.64 - - - - 0.902 - - 0.846 0.892 ubiquitin-fold modifier 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2930]
4. arfrp1 ENSDARG00000057857 2840 2.471 0.784 - - - 0.873 - - 0.814 - ADP-ribosylation factor related protein 1 [Source:ZFIN;Acc:ZDB-GENE-050227-14]
5. ndufa4 ENSDARG00000056108, ENSDARG00000116304 2355 2.462 - - - - 0.939 0.773 0.750 - - NADH:ubiquinone oxidoreductase subunit A4 [Source:ZFIN;Acc:ZDB-GENE-040426-1962]
6. si:ch211-161h7.4 ENSDARG00000087238 4399 2.46 0.793 - - - 0.820 - - 0.847 - si:ch211-161h7.4 [Source:ZFIN;Acc:ZDB-GENE-091118-108]
7. grsf1 ENSDARG00000053021 2752 2.238 0.751 - - - - 0.721 0.766 - - G-rich RNA sequence binding factor 1 [Source:ZFIN;Acc:ZDB-GENE-060825-196]
8. cluh cluh 3851 2.221 0.752 - - - - 0.715 0.754 - -
9. cldn7b ENSDARG00000014047, ENSDARG00000114912 2960 1.89 - 0.950 - - - - - - 0.940 claudin 7b [Source:ZFIN;Acc:ZDB-GENE-001103-5]
10. gnao1b ENSDARG00000036058, ENSDARG00000112730 1951 1.888 - 0.964 - - 0.924 - - - - guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O, b [Source:ZFIN;Acc:ZDB-GENE-040426-1693]
11. vps53 ENSDARG00000069324, ENSDARG00000116674 1130 1.882 - 0.934 - - - - - - 0.948 vacuolar protein sorting 53 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-041114-199]
12. dusp11 ENSDARG00000038156 2490 1.876 - - - - 0.917 - - - 0.959 dual specificity phosphatase 11 (RNA/RNP complex 1-interacting) [Source:ZFIN;Acc:ZDB-GENE-050417-226]
13. eya3 ENSDARG00000036100 1965 1.862 - 0.952 - - 0.910 - - - - EYA transcriptional coactivator and phosphatase 3 [Source:ZFIN;Acc:ZDB-GENE-060503-864]
14. alg5 ENSDARG00000021938, ENSDARG00000061235 2279 1.859 - - - - 0.919 - - - 0.940 asparagine-linked glycosylation 5 (dolichyl-phosphate beta-glucosyltransferase) [Source:ZFIN;Acc:ZDB-GENE-030131-6586]
15. rnf7 ENSDARG00000055524 3390 1.856 - 0.961 - - - - - - 0.895 ring finger protein 7 [Source:ZFIN;Acc:ZDB-GENE-050220-12]
16. cnpy1 ENSDARG00000003757 1132 1.852 - - - - 0.942 - - - 0.910 canopy FGF signaling regulator 1 [Source:ZFIN;Acc:ZDB-GENE-060315-3]
17. arid1ab ENSDARG00000101891 1722 1.845 - 0.922 - - 0.923 - - - - AT rich interactive domain 1Ab (SWI-like) [Source:ZFIN;Acc:ZDB-GENE-030131-5725]
18. cdk11b ENSDARG00000102546 1579 1.839 - 0.932 - - - - - - 0.907 cyclin-dependent kinase 11B [Source:ZFIN;Acc:ZDB-GENE-041212-74]
19. pank1b ENSDARG00000010098 3202 1.816 - 0.935 - - - - - - 0.881 pantothenate kinase 1b [Source:ZFIN;Acc:ZDB-GENE-070209-259]
20. atf4b2 atf4b2 4734 1.808 - 0.948 - - - - - 0.860 -
21. utp3 ENSDARG00000056720 922 1.804 0.865 - - - 0.939 - - - - UTP3, small subunit (SSU) processome component, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040912-163]
22. uck2b ENSDARG00000022213 1542 1.8 0.867 - - - - - - - 0.933 uridine-cytidine kinase 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5265]
23. mfap2 ENSDARG00000059367 3774 1.768 - - - - 0.832 - - - 0.936 microfibril associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6710]
24. fbxl5 ENSDARG00000043046 1403 1.764 - - - - 0.908 - - 0.856 - F-box and leucine-rich repeat protein 5 [Source:ZFIN;Acc:ZDB-GENE-030131-900]
25. psma6b ENSDARG00000013966 4410 1.763 - 0.950 - - - - - 0.813 - proteasome subunit alpha 6b [Source:ZFIN;Acc:ZDB-GENE-040718-329]
26. eif2d ENSDARG00000012929 2624 1.749 - - - - 0.954 - - - 0.795 eukaryotic translation initiation factor 2D [Source:ZFIN;Acc:ZDB-GENE-040426-1226]
27. nucks1b ENSDARG00000012777 4468 1.744 - - - - - - - 0.811 0.933 nuclear casein kinase and cyclin-dependent kinase substrate 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4544]
28. arrb2b ENSDARG00000011545 3126 1.743 - - - - 0.905 - - 0.838 - arrestin, beta 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1332]
29. lrpprc ENSDARG00000043970 3847 1.724 - - - - - 0.796 - - 0.928 leucine-rich pentatricopeptide repeat containing [Source:ZFIN;Acc:ZDB-GENE-030131-7887]
30. vkorc1 ENSDARG00000086183 1212 1.723 0.792 - - - - - - - 0.931 vitamin K epoxide reductase complex, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2286]
31. ddx49 ENSDARG00000012899 1604 1.723 0.773 - - - 0.950 - - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 [Source:ZFIN;Acc:ZDB-GENE-031030-3]
32. sec14l1 ENSDARG00000098821, ENSDARG00000103991 1004 1.721 - - - - - 0.788 - - 0.933 SEC14-like lipid binding 1 [Source:ZFIN;Acc:ZDB-GENE-040426-801]
33. si:dkey-9i23.11 si:dkey-9i23.11 3818 1.712 0.750 0.962 - - - - - - -
34. CPEB4 CPEB4 3249 1.709 - - - - 0.935 - - 0.774 -
35. sec62 ENSDARG00000019951 3724 1.708 - - - - - - - 0.801 0.907 SEC62 homolog, preprotein translocation factor [Source:ZFIN;Acc:ZDB-GENE-050913-83]
36. snrpb ENSDARG00000011125 11729 1.7 - - - - 0.820 - - 0.880 - small nuclear ribonucleoprotein polypeptides B and B1 [Source:ZFIN;Acc:ZDB-GENE-040426-1819]
37. rnf2 ENSDARG00000010381 3427 1.699 - 0.954 - - - - 0.745 - - ring finger protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5243]
38. zgc:86811 ENSDARG00000035573 958 1.698 - - - - - - 0.762 - 0.936 zgc:86811 [Source:ZFIN;Acc:ZDB-GENE-040625-113]
39. hint1 ENSDARG00000103824, ENSDARG00000110789 8302 1.694 - 0.936 - - - - - - 0.758 histidine triad nucleotide binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040927-8]
40. gipc1 ENSDARG00000104483 2913 1.688 - - - - - - - 0.880 0.808 GIPC PDZ domain containing family, member 1 [Source:ZFIN;Acc:ZDB-GENE-060726-1]
41. ccm2 ENSDARG00000013705 3464 1.683 - 0.929 - - - - - 0.754 - CCM2 scaffold protein [Source:ZFIN;Acc:ZDB-GENE-040712-6]
42. slc1a2b ENSDARG00000102453 3136 1.68 - - - - 0.852 - - 0.828 - solute carrier family 1 (glial high affinity glutamate transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-030131-7779]
43. pole3 ENSDARG00000008551, ENSDARG00000111677, ENSDARG00000114995 485 1.679 - - - - 0.944 - 0.735 - - polymerase (DNA directed), epsilon 3 (p17 subunit) [Source:ZFIN;Acc:ZDB-GENE-040426-1773]
44. hspg2 ENSDARG00000076564 3440 1.677 - - - - 0.944 - 0.733 - - heparan sulfate proteoglycan 2 [Source:ZFIN;Acc:ZDB-GENE-080807-4]
45. taf11 ENSDARG00000037855 2624 1.676 - - - - 0.899 - - 0.777 - TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-040718-283]
46. BX682552.2 BX682552.2 1427 1.675 - - - - - - - 0.759 0.916
47. nob1 ENSDARG00000016080 2483 1.674 0.766 0.908 - - - - - - - NIN1 (RPN12) binding protein 1 homolog [Source:ZFIN;Acc:ZDB-GENE-030131-3112]
48. hmga2 ENSDARG00000069912 20402 1.671 - 0.735 - - 0.936 - - - - high mobility group AT-hook 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3148]
49. ndufs1 ENSDARG00000028546 5795 1.669 - 0.950 - - - - - - 0.719 NADH:ubiquinone oxidoreductase core subunit S1 [Source:ZFIN;Acc:ZDB-GENE-030131-478]
50. idh3a ENSDARG00000030278 2983 1.664 - - - - 0.929 - 0.735 - - isocitrate dehydrogenase 3 (NAD+) alpha [Source:ZFIN;Acc:ZDB-GENE-040426-1007]
51. rpa2 ENSDARG00000037188 4284 1.662 - - - - 0.805 - - - 0.857 replication protein A2 [Source:ZFIN;Acc:ZDB-GENE-010131-3]
52. hspa4a ENSDARG00000004754 3439 1.662 - - - - - - 0.750 - 0.912 heat shock protein 4a [Source:ZFIN;Acc:ZDB-GENE-040426-2832]
53. foxo3b ENSDARG00000042904 5046 1.661 - - - - 0.859 - 0.802 - - forkhead box O3b [Source:ZFIN;Acc:ZDB-GENE-990708-6]
54. arl4cb ENSDARG00000032708, ENSDARG00000110274 2769 1.661 0.750 - - - 0.911 - - - - ADP-ribosylation factor-like 4Cb [Source:ZFIN;Acc:ZDB-GENE-040426-2382]
55. ddx6 ENSDARG00000061338 2514 1.661 - - - - - - 0.712 - 0.949 DEAD (Asp-Glu-Ala-Asp) box helicase 6 [Source:ZFIN;Acc:ZDB-GENE-070912-83]
56. prdx3 ENSDARG00000032102, ENSDARG00000114240 10034 1.66 0.752 0.908 - - - - - - - peroxiredoxin 3 [Source:ZFIN;Acc:ZDB-GENE-030826-18]
57. ache ENSDARG00000031796 1985 1.659 0.809 - - - - - - 0.850 - acetylcholinesterase [Source:ZFIN;Acc:ZDB-GENE-010906-1]
58. atpif1a 6030 1.651 - 0.909 - - - 0.742 - - - ATPase inhibitory factor 1a
59. rrp7a ENSDARG00000098934 1123 1.649 0.851 - - - 0.798 - - - - ribosomal RNA processing 7 homolog A [Source:ZFIN;Acc:ZDB-GENE-050417-38]
60. tomm70a ENSDARG00000029639, ENSDARG00000112054 7715 1.648 - - - - - - - 0.806 0.842 translocase of outer mitochondrial membrane 70 homolog A (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-8173]
61. igsf9a ENSDARG00000075864 1870 1.646 - 0.940 - - - - 0.706 - - immunoglobulin superfamily, member 9a [Source:ZFIN;Acc:ZDB-GENE-060503-288]
62. cox7c ENSDARG00000104537 12169 1.644 - - - - - 0.786 - - 0.858 cytochrome c oxidase subunit 7C [Source:ZFIN;Acc:ZDB-GENE-030131-8062]
63. scoca ENSDARG00000087333 1739 1.643 - - - - - - 0.709 - 0.934 short coiled-coil protein a [Source:ZFIN;Acc:ZDB-GENE-061013-114]
64. kbp kbp 701 1.641 - - - - - - 0.705 - 0.936
65. polr1e ENSDARG00000006434, ENSDARG00000113920 770 1.64 - 0.924 - - - - 0.716 - - RNA polymerase I subunit E [Source:ZFIN;Acc:ZDB-GENE-050522-251]
66. GATAD2B ENSDARG00000005834 3855 1.64 0.766 - - - - - - 0.874 - GATA zinc finger domain containing 2B [Source:ZFIN;Acc:ZDB-GENE-060503-655]
67. pmela ENSDARG00000091298 5179 1.639 0.820 - - - 0.819 - - - - premelanosome protein a [Source:ZFIN;Acc:ZDB-GENE-030131-9818]
68. arhgef1b ENSDARG00000055837 2330 1.632 0.712 - - - 0.920 - - - - Rho guanine nucleotide exchange factor (GEF) 1b [Source:ZFIN;Acc:ZDB-GENE-060616-136]
69. agpat4 ENSDARG00000069044 4487 1.63 - - - - 0.784 - - 0.846 - 1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta) [Source:ZFIN;Acc:ZDB-GENE-040426-1924]
70. p4ha1b ENSDARG00000071082, ENSDARG00000112774 3198 1.622 0.738 - - - - - - - 0.884 prolyl 4-hydroxylase, alpha polypeptide I b [Source:ZFIN;Acc:ZDB-GENE-030131-4089]
71. zgc:162356 zgc:162356 5115 1.616 - - - - 0.782 - - - 0.834
72. CR354611.2 CR354611.2 2040 1.615 - - - - - - - 0.867 0.748
73. atp5ia 4773 1.614 - - - - - 0.718 - - 0.896 ATP synthase, H+ transporting, mitochondrial Fo complex, subunit Ea
74. fkbp7 ENSDARG00000010962 2986 1.611 0.730 - - - 0.881 - - - - FK506 binding protein 7 [Source:ZFIN;Acc:ZDB-GENE-030616-182]
75. anapc16 ENSDARG00000013822 5857 1.609 0.729 - - - - - - - 0.880 anaphase promoting complex subunit 16 [Source:ZFIN;Acc:ZDB-GENE-050417-430]
76. tpst1l ENSDARG00000044513 1339 1.606 0.809 - - - - - 0.797 - - tyrosylprotein sulfotransferase 1, like [Source:ZFIN;Acc:ZDB-GENE-040316-1]
77. THOP1 ENSDARG00000013776 2717 1.605 - - - - - - 0.837 - 0.768 thimet oligopeptidase 1 [Source:ZFIN;Acc:ZDB-GENE-040718-47]
78. CR387996.1 ENSDARG00000097774 3037 1.605 0.780 - - - - - - 0.825 -
79. si:dkey-147f3.4_1 ENSDARG00000071029, ENSDARG00000092077 2259 1.601 - - - - - - 0.721 - 0.880 si:dkey-147f3.4 [Source:ZFIN;Acc:ZDB-GENE-061009-29]
80. pold3 ENSDARG00000076169 694 1.594 0.720 - - - - - - 0.874 - polymerase (DNA-directed), delta 3, accessory subunit [Source:ZFIN;Acc:ZDB-GENE-060512-59]
81. rbm25 rbm25 3629 1.592 0.844 - - - - - 0.748 - -
82. ndufs6 ENSDARG00000056583 7220 1.589 - - - - - 0.796 0.793 - - NADH:ubiquinone oxidoreductase subunit S6 [Source:ZFIN;Acc:ZDB-GENE-040912-86]
83. C25H12orf73 C25H12orf73 2031 1.587 0.877 - - - - - 0.710 - -
84. hprt1 ENSDARG00000008884, ENSDARG00000117138 2486 1.583 0.858 - - - - - - 0.725 - hypoxanthine phosphoribosyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1918]
85. C8H9orf64 C8H9orf64 640 1.573 0.836 - - - - - 0.737 - -
86. aco2 ENSDARG00000007294, ENSDARG00000111879 5162 1.571 - - - - - - 0.821 - 0.750 aconitase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-030131-1390]
87. TSSC4 ENSDARG00000036144 1994 1.566 - - - - - 0.731 - 0.835 - tumor suppressing subtransferable candidate 4 [Source:ZFIN;Acc:ZDB-GENE-060825-263]
88. cdkl1 ENSDARG00000017329 3345 1.563 - - - - - - - 0.805 0.758 cyclin-dependent kinase-like 1 (CDC2-related kinase) [Source:ZFIN;Acc:ZDB-GENE-040808-34]
89. tufm ENSDARG00000104173 9292 1.562 - - - - - - 0.782 - 0.780 Tu translation elongation factor, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-050320-73]
90. plod1a ENSDARG00000059746 3364 1.548 0.776 - - - - - 0.772 - - procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3165]
91. ndufv1 ENSDARG00000036438 8437 1.547 - - - - - 0.706 - - 0.841 NADH:ubiquinone oxidoreductase core subunit V1 [Source:ZFIN;Acc:ZDB-GENE-040808-73]
92. emc2 ENSDARG00000003308, ENSDARG00000114541 7141 1.546 - - - - 0.837 - - 0.709 - ER membrane protein complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-040625-82]
93. acadm ENSDARG00000038900 2319 1.545 - - - - - 0.797 0.748 - - acyl-CoA dehydrogenase medium chain [Source:ZFIN;Acc:ZDB-GENE-040426-1945]
94. diabloa ENSDARG00000104172 2192 1.545 - 0.803 - - - - - 0.742 - diablo, IAP-binding mitochondrial protein a [Source:ZFIN;Acc:ZDB-GENE-040426-1303]
95. nutf2l ENSDARG00000014499 3927 1.544 0.769 - - - - - - - 0.775 nuclear transport factor 2, like [Source:ZFIN;Acc:ZDB-GENE-020416-1]
96. chchd3 chchd3 4139 1.527 - - - - - 0.747 0.780 - -
97. bcl2l13 ENSDARG00000062370, ENSDARG00000111116 3206 1.515 0.789 - - - - - 0.726 - - BCL2 like 13 [Source:ZFIN;Acc:ZDB-GENE-050419-215]
98. gas1a ENSDARG00000077298 10891 1.514 - 0.758 - - 0.756 - - - - growth arrest-specific 1a [Source:ZFIN;Acc:ZDB-GENE-050302-155]
99. ST7 ENSDARG00000039960, ENSDARG00000112691 2020 1.512 0.711 - - - - - 0.801 - - suppression of tumorigenicity 7 [Source:ZFIN;Acc:ZDB-GENE-060421-2807]
100. mccc1 ENSDARG00000102538, ENSDARG00000115996 2069 1.507 - - - - - 0.774 0.733 - - methylcrotonoyl-CoA carboxylase 1 (alpha) [Source:ZFIN;Acc:ZDB-GENE-050208-450]

There are 1583 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA