Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for efnb3b

Gene Name Gene ID Reads Annotation
efnb3b ENSDARG00000042277 5823 ephrin-B3b [Source:ZFIN;Acc:ZDB-GENE-010618-3]










Genes with expression patterns similar to efnb3b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. efnb3b ENSDARG00000042277 5823 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ephrin-B3b [Source:ZFIN;Acc:ZDB-GENE-010618-3]
2. fzr1 fzr1 2984 3.327 - 0.738 0.935 0.935 - 0.719 - - -
3. mrpl11 ENSDARG00000013075 2927 2.795 - - 0.928 0.927 0.940 - - - - mitochondrial ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040718-294]
4. pcm1 ENSDARG00000062198, ENSDARG00000112178 2912 2.687 - - - - 0.955 - 0.741 - 0.991 pericentriolar material 1 [Source:ZFIN;Acc:ZDB-GENE-030131-428]
5. znf292b ENSDARG00000043973 3791 2.672 - - 0.951 - 0.954 0.767 - - - zinc finger protein 292b [Source:ZFIN;Acc:ZDB-GENE-030131-9559]
6. ATL2 ENSDARG00000057719, ENSDARG00000113378, ENSDARG00000113487 1987 2.667 - - 0.942 - - 0.732 - - 0.993 atlastin GTPase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6505]
7. arpp19b ENSDARG00000039880 4823 2.567 - - 0.926 0.930 - - 0.711 - - cAMP-regulated phosphoprotein 19b [Source:ZFIN;Acc:ZDB-GENE-040426-930]
8. nmt1a ENSDARG00000052966 5918 2.559 - - - 0.915 0.943 - - 0.701 - N-myristoyltransferase 1a [Source:ZFIN;Acc:ZDB-GENE-050522-477]
9. cuedc1b ENSDARG00000054748 1638 2.511 - 0.717 - - 0.946 - - 0.848 - CUE domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-070424-29]
10. pes ENSDARG00000018902 3286 2.508 - 0.813 0.866 - - - - 0.829 - pescadillo [Source:ZFIN;Acc:ZDB-GENE-990415-206]
11. clgn ENSDARG00000009315 993 2.501 - - - - 0.942 0.836 0.723 - - calmegin [Source:ZFIN;Acc:ZDB-GENE-060929-708]
12. IM:7163548 IM:7163548 6540 2.493 - - - - 0.894 0.818 0.781 - -
13. ube2a ENSDARG00000098466 12765 2.475 - - 0.765 - 0.870 - - 0.840 - ubiquitin-conjugating enzyme E2A (RAD6 homolog) [Source:ZFIN;Acc:ZDB-GENE-030616-72]
14. qars ENSDARG00000010316 2715 2.472 - 0.728 0.915 - - - - 0.829 - glutaminyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-040426-1011]
15. actr1 ENSDARG00000011611 3879 2.451 - 0.793 - - 0.904 - 0.754 - - ARP1 actin related protein 1, centractin [Source:ZFIN;Acc:ZDB-GENE-040426-2695]
16. ssbp3b ENSDARG00000030155 7163 2.438 - - 0.897 - 0.748 - 0.793 - - single stranded DNA binding protein 3b [Source:ZFIN;Acc:ZDB-GENE-040426-2801]
17. tardbpl ENSDARG00000004452, ENSDARG00000116205 12160 2.437 - - - - - 0.728 0.725 - 0.984 TAR DNA binding protein, like [Source:ZFIN;Acc:ZDB-GENE-031030-1]
18. tjp1a ENSDARG00000077506 2658 2.409 - 0.742 - 0.931 - - 0.736 - - tight junction protein 1a [Source:ZFIN;Acc:ZDB-GENE-031001-2]
19. ctbp1 ENSDARG00000057007, ENSDARG00000115804 5795 2.395 - - - - 0.917 0.771 0.707 - - C-terminal binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-010130-1]
20. mcm5 ENSDARG00000019507 6407 2.387 - 0.762 0.847 - 0.778 - - - - minichromosome maintenance complex component 5 [Source:ZFIN;Acc:ZDB-GENE-021209-1]
21. hmgb3a ENSDARG00000056725 15668 2.37 - - - 0.912 - 0.732 0.726 - - high mobility group box 3a [Source:ZFIN;Acc:ZDB-GENE-050428-1]
22. onecut1 ENSDARG00000007982, ENSDARG00000112251 6307 2.357 - 0.716 0.934 - - 0.707 - - - one cut homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1469]
23. plk1 ENSDARG00000058471, ENSDARG00000111745 7020 2.306 - - 0.815 - - 0.740 0.751 - - polo-like kinase 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-021115-7]
24. ubr5 ENSDARG00000018192 9267 2.23 - 0.753 - - 0.761 - 0.716 - - ubiquitin protein ligase E3 component n-recognin 5 [Source:ZFIN;Acc:ZDB-GENE-030131-6559]
25. eftud2 ENSDARG00000012261 3081 1.937 - - 0.962 0.975 - - - - - elongation factor Tu GTP binding domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1569]
26. arl8bb ENSDARG00000070318 1428 1.922 - - 0.931 - - - - - 0.991 ADP-ribosylation factor-like 8Bb [Source:ZFIN;Acc:ZDB-GENE-080516-10]
27. tcf3b ENSDARG00000099999, ENSDARG00000112646 3589 1.91 - - 0.963 0.947 - - - - - transcription factor 3b [Source:ZFIN;Acc:ZDB-GENE-051113-64]
28. ncalda ENSDARG00000070688 5069 1.888 - - 0.946 0.942 - - - - - neurocalcin delta a [Source:ZFIN;Acc:ZDB-GENE-080220-28]
29. fbxw11b ENSDARG00000017230, ENSDARG00000112841 2593 1.886 - - 0.946 - 0.940 - - - - F-box and WD repeat domain containing 11b [Source:ZFIN;Acc:ZDB-GENE-040426-2903]
30. SLC7A5 ENSDARG00000099265, ENSDARG00000115845 2319 1.881 - - - 0.933 0.948 - - - - solute carrier family 7 (amino acid transporter light chain, L system), member 5 [Source:ZFIN;Acc:ZDB-GENE-080818-4]
31. snrnp27 ENSDARG00000035625 9080 1.881 - - - - 0.888 - - - 0.993 small nuclear ribonucleoprotein 27 (U4/U6.U5) [Source:ZFIN;Acc:ZDB-GENE-040718-457]
32. CABZ01055343.2 CABZ01055343.2 10312 1.875 - - - 0.935 0.940 - - - -
33. kdm6bb ENSDARG00000056929 4807 1.874 - - - 0.933 0.941 - - - - lysine (K)-specific demethylase 6B, b [Source:ZFIN;Acc:ZDB-GENE-040724-166]
34. emc3 ENSDARG00000020607 3406 1.865 - - 0.929 0.936 - - - - - ER membrane protein complex subunit 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2904]
35. znf207a ENSDARG00000015538 2630 1.865 - - 0.948 - 0.917 - - - - zinc finger protein 207, a [Source:ZFIN;Acc:ZDB-GENE-040426-2273]
36. rab5c ENSDARG00000026712 4733 1.855 - - 0.937 0.918 - - - - - RAB5C, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-031118-30]
37. CABZ01070258.1 ENSDARG00000105687 3643 1.845 - - - 0.937 0.908 - - - -
38. si:dkey-67c22.2 ENSDARG00000055389 6410 1.84 - - - - - - 0.844 - 0.996 si:dkey-67c22.2 [Source:ZFIN;Acc:ZDB-GENE-030131-5845]
39. xpo1a ENSDARG00000078041 3544 1.837 - - 0.943 - - - - 0.894 - exportin 1 (CRM1 homolog, yeast) a [Source:ZFIN;Acc:ZDB-GENE-050309-201]
40. snrpe ENSDARG00000033175 7462 1.82 - - - 0.938 - 0.882 - - - small nuclear ribonucleoprotein polypeptide E [Source:ZFIN;Acc:ZDB-GENE-040426-1112]
41. SSBP4 ENSDARG00000056483 5156 1.814 - - - 0.942 - - - 0.872 - single stranded DNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-469]
42. dag1 ENSDARG00000016153 10886 1.812 - - - 0.934 0.878 - - - - dystroglycan 1 [Source:ZFIN;Acc:ZDB-GENE-021223-1]
43. gpx4b ENSDARG00000076836 8085 1.808 - - - - - - - 0.820 0.988 glutathione peroxidase 4b [Source:ZFIN;Acc:ZDB-GENE-030410-3]
44. nusap1 ENSDARG00000002403 6953 1.804 - - - 0.935 - 0.869 - - - nucleolar and spindle associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-030827-5]
45. ubap2 ubap2 4167 1.803 - - - 0.955 - 0.848 - - -
46. coro7 ENSDARG00000089616 2141 1.793 - - 0.940 - - - - 0.853 - coronin 7 [Source:ZFIN;Acc:ZDB-GENE-050706-137]
47. polr2j ENSDARG00000035146 1493 1.793 - - 0.952 - - 0.841 - - - polymerase (RNA) II (DNA directed) polypeptide J [Source:ZFIN;Acc:ZDB-GENE-050522-120]
48. rufy3 ENSDARG00000029692 3031 1.791 - - - - - 0.797 - - 0.994 RUN and FYVE domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-050327-58]
49. ipo4 ENSDARG00000041493 1578 1.789 - 0.847 - - 0.942 - - - - importin 4 [Source:ZFIN;Acc:ZDB-GENE-041014-307]
50. ppp3ccb ENSDARG00000057456, ENSDARG00000116250 6265 1.785 - - 0.885 0.900 - - - - - protein phosphatase 3, catalytic subunit, gamma isozyme, b [Source:ZFIN;Acc:ZDB-GENE-070112-1102]
51. mcm4 ENSDARG00000040041 7971 1.785 - - 0.826 0.959 - - - - - minichromosome maintenance complex component 4 [Source:ZFIN;Acc:ZDB-GENE-030131-9544]
52. meaf6 ENSDARG00000101216 6865 1.784 - - - - - - 0.789 - 0.995 MYST/Esa1-associated factor 6 [Source:ZFIN;Acc:ZDB-GENE-040808-12]
53. sulf2l sulf2l 4980 1.781 - - - 0.932 - - 0.849 - -
54. srsf5b ENSDARG00000027734 6996 1.77 - - 0.941 - - 0.829 - - - serine/arginine-rich splicing factor 5b [Source:ZFIN;Acc:ZDB-GENE-040718-354]
55. tra2a ENSDARG00000007863 4449 1.77 - - - - 0.929 0.841 - - - transformer 2 alpha homolog [Source:ZFIN;Acc:ZDB-GENE-040426-1391]
56. si:ch211-197h24.6 ENSDARG00000091631 1933 1.767 - 0.822 - - 0.945 - - - - si:ch211-197h24.6 [Source:ZFIN;Acc:ZDB-GENE-030131-1361]
57. fam135a ENSDARG00000059843 2352 1.767 - - 0.941 - - - - 0.826 - family with sequence similarity 135, member A [Source:ZFIN;Acc:ZDB-GENE-080130-1]
58. zgc:77086 ENSDARG00000014015 4908 1.759 - 0.782 - - - - - - 0.977 zgc:77086 [Source:ZFIN;Acc:ZDB-GENE-040426-2238]
59. srsf11 ENSDARG00000098574 12801 1.759 - - - 0.934 - - - 0.825 - serine/arginine-rich splicing factor 11 [Source:ZFIN;Acc:ZDB-GENE-030131-605]
60. KDM6B KDM6B 10265 1.757 - - - 0.920 0.837 - - - -
61. exosc10 ENSDARG00000037708, ENSDARG00000115953 1121 1.755 - 0.807 - - 0.948 - - - - exosome component 10 [Source:ZFIN;Acc:ZDB-GENE-040426-781]
62. sepw2a 8597 1.752 - - - 0.928 - 0.824 - - - selenoprotein W, 2a
63. supt5h ENSDARG00000042724, ENSDARG00000111598 6419 1.748 - - - 0.920 - - - 0.828 - SPT5 homolog, DSIF elongation factor subunit [Source:ZFIN;Acc:ZDB-GENE-001207-1]
64. syn1 ENSDARG00000060368, ENSDARG00000111164 397 1.744 - - 0.932 - - 0.812 - - - synapsin I [Source:ZFIN;Acc:ZDB-GENE-081105-93]
65. atp1b3a ENSDARG00000015790 12310 1.742 - - 0.780 - - - - - 0.962 ATPase Na+/K+ transporting subunit beta 3a [Source:ZFIN;Acc:ZDB-GENE-990415-167]
66. sf3b2 ENSDARG00000018049 4675 1.738 - - 0.957 - - 0.781 - - - splicing factor 3b, subunit 2 [Source:ZFIN;Acc:ZDB-GENE-070928-1]
67. pcdh1gc5 ENSDARG00000104826 10052 1.731 - - - - - 0.765 - - 0.966 protocadherin 1 gamma c 5 [Source:ZFIN;Acc:ZDB-GENE-041118-16]
68. ube2h ENSDARG00000000019 9900 1.731 - - 0.845 0.886 - - - - - ubiquitin-conjugating enzyme E2H (UBC8 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-030616-67]
69. cdkal1 ENSDARG00000104848 2102 1.728 - 0.803 - 0.925 - - - - - CDK5 regulatory subunit associated protein 1-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1443]
70. cdc25 cdc25 3913 1.727 - - - - - - 0.733 - 0.994
71. anp32b ENSDARG00000023330 25013 1.726 - - - 0.938 - - 0.788 - - acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:ZFIN;Acc:ZDB-GENE-030131-719]
72. rbms2b ENSDARG00000056150, ENSDARG00000115483 2104 1.721 - 0.729 - - - - - - 0.992 RNA binding motif, single stranded interacting protein 2b [Source:ZFIN;Acc:ZDB-GENE-040801-51]
73. adnp2b ENSDARG00000028431 4683 1.717 - - - - - - 0.740 - 0.977 ADNP homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5930]
74. palld ENSDARG00000040009 2381 1.716 - 0.726 - - - - - - 0.990 palladin, cytoskeletal associated protein [Source:ZFIN;Acc:ZDB-GENE-041014-252]
75. zbtb18 ENSDARG00000028228 3653 1.716 - - 0.965 - - 0.751 - - - zinc finger and BTB domain containing 18 [Source:ZFIN;Acc:ZDB-GENE-050419-73]
76. brd7 ENSDARG00000008380 3654 1.715 - - - 0.944 - - 0.771 - - bromodomain containing 7 [Source:ZFIN;Acc:ZDB-GENE-040426-2687]
77. rbbp6 ENSDARG00000037919 4813 1.715 - - - 0.977 - - 0.738 - - retinoblastoma binding protein 6 [Source:ZFIN;Acc:ZDB-GENE-040930-5]
78. MAP4K4 ENSDARG00000098670 4665 1.712 - - - - 0.901 0.811 - - - mitogen-activated protein kinase kinase kinase kinase 4 [Source:ZFIN;Acc:ZDB-GENE-030131-6722]
79. si:dkey-19e4.5 ENSDARG00000089886 2562 1.71 - - 0.948 - - 0.762 - - - si:dkey-19e4.5 [Source:ZFIN;Acc:ZDB-GENE-030131-1852]
80. mrpl12 ENSDARG00000038768 5539 1.708 - 0.717 - - - - - - 0.991 mitochondrial ribosomal protein L12 [Source:ZFIN;Acc:ZDB-GENE-050417-187]
81. pa2g4b ENSDARG00000070657 7999 1.707 - 0.778 - 0.929 - - - - - proliferation-associated 2G4, b [Source:ZFIN;Acc:ZDB-GENE-030131-2182]
82. polr1a ENSDARG00000098375 1224 1.706 - 0.769 - 0.937 - - - - - RNA polymerase I subunit A [Source:ZFIN;Acc:ZDB-GENE-030131-5286]
83. ddx49 ENSDARG00000012899 1604 1.705 - 0.790 0.915 - - - - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 [Source:ZFIN;Acc:ZDB-GENE-031030-3]
84. rfc1 ENSDARG00000054799 1416 1.703 - 0.771 0.932 - - - - - - replication factor C (activator 1) 1 [Source:ZFIN;Acc:ZDB-GENE-070410-99]
85. syt11a ENSDARG00000057913 1145 1.702 - - 0.941 - - 0.761 - - - synaptotagmin XIa [Source:ZFIN;Acc:ZDB-GENE-040426-2815]
86. gfap ENSDARG00000025301 5584 1.7 - - 0.959 - - 0.741 - - - glial fibrillary acidic protein [Source:ZFIN;Acc:ZDB-GENE-990914-3]
87. bxdc2 ENSDARG00000098935 1348 1.698 - 0.760 0.938 - - - - - - brix domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060518-1]
88. IDH2 ENSDARG00000003795 18659 1.697 - - - 0.900 - - - - 0.797 isocitrate dehydrogenase 2 (NADP+), mitochondrial [Source:ZFIN;Acc:ZDB-GENE-031118-95]
89. si:ch211-11k18.4 ENSDARG00000087869 3298 1.693 - - - 0.939 - - - 0.754 - si:ch211-11k18.4 [Source:ZFIN;Acc:ZDB-GENE-070912-22]
90. ddx39aa ENSDARG00000006225, ENSDARG00000116665 6675 1.692 - - - - 0.893 - - 0.799 - DEAD (Asp-Glu-Ala-Asp) box polypeptide 39Aa [Source:ZFIN;Acc:ZDB-GENE-030131-4275]
91. pdlim1 ENSDARG00000019845 5765 1.688 - - 0.772 - 0.916 - - - - PDZ and LIM domain 1 (elfin) [Source:ZFIN;Acc:ZDB-GENE-030131-5227]
92. caprin1a ENSDARG00000009346, ENSDARG00000112212 9675 1.688 - - - 0.923 - 0.765 - - - cell cycle associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-040801-226]
93. histh1l ENSDARG00000035519 12293 1.688 - - - - - 0.725 - - 0.963 histone H1 like [Source:ZFIN;Acc:ZDB-GENE-050417-145]
94. atp1b4 ENSDARG00000053262 1337 1.688 - - - - 0.949 0.739 - - - ATPase Na+/K+ transporting subunit beta 4 [Source:ZFIN;Acc:ZDB-GENE-070412-1]
95. ciao1 ENSDARG00000059212 1222 1.687 - 0.752 0.935 - - - - - - cytosolic iron-sulfur assembly component 1 [Source:ZFIN;Acc:ZDB-GENE-040426-839]
96. coe2 coe2 1633 1.687 - - 0.961 - - 0.726 - - -
97. AL844567.1 AL844567.1 1605 1.687 - - 0.957 - - 0.730 - - -
98. rqcd1 2301 1.686 - - 0.952 - - 0.734 - - - RCD1 required for cell differentiation1 homolog (S. pombe)
99. zic4 ENSDARG00000031307 1228 1.686 - - - 0.941 - 0.745 - - - zic family member 4 [Source:ZFIN;Acc:ZDB-GENE-040622-4]
100. zgc:56095 ENSDARG00000018461 3360 1.685 - - 0.866 - - - - 0.819 - zgc:56095 [Source:ZFIN;Acc:ZDB-GENE-040426-1948]

There are 1840 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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