Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for efnb1

Gene Name Gene ID Reads Annotation
efnb1 ENSDARG00000007723, ENSDARG00000116351 1595 ephrin-B1 [Source:ZFIN;Acc:ZDB-GENE-010618-2]










Genes with expression patterns similar to efnb1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. efnb1 ENSDARG00000007723, ENSDARG00000116351 1595 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ephrin-B1 [Source:ZFIN;Acc:ZDB-GENE-010618-2]
2. brd1b ENSDARG00000051798 1712 2.309 - - - 0.776 - 0.828 - - 0.705 bromodomain containing 1b [Source:ZFIN;Acc:ZDB-GENE-070209-98]
3. lsm14aa ENSDARG00000006600 2298 2.25 0.716 - - 0.786 - 0.748 - - - LSM14A mRNA processing body assembly factor a [Source:ZFIN;Acc:ZDB-GENE-040426-1567]
4. fkbp2 ENSDARG00000044540 1615 1.663 - - - 0.758 - 0.905 - - - FK506 binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-040912-126]
5. brd4 ENSDARG00000078904 5367 1.65 - - - 0.754 - 0.896 - - - bromodomain containing 4 [Source:ZFIN;Acc:ZDB-GENE-030131-267]
6. rwdd ENSDARG00000068256 964 1.647 - 0.790 - - - 0.857 - - - RWD domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-041010-61]
7. gid8b ENSDARG00000037589 2121 1.635 - - - 0.762 - 0.873 - - - GID complex subunit 8 homolog b (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030515-4]
8. tsen34 ENSDARG00000061370, ENSDARG00000115749 814 1.631 - - - 0.781 - 0.850 - - - TSEN34 tRNA splicing endonuclease subunit [Source:ZFIN;Acc:ZDB-GENE-050419-115]
9. bcas2 ENSDARG00000043631 1971 1.63 - - - - - 0.877 - - 0.753 BCAS2, pre-mRNA processing factor [Source:ZFIN;Acc:ZDB-GENE-030408-5]
10. med22 ENSDARG00000014148 1307 1.625 - - - 0.817 - - 0.808 - - mediator complex subunit 22 [Source:ZFIN;Acc:ZDB-GENE-040625-156]
11. si:ch211-210c8.6 ENSDARG00000017811 908 1.617 - - - - - 0.864 0.753 - - si:ch211-210c8.6 [Source:ZFIN;Acc:ZDB-GENE-030131-3630]
12. csnk1g2a ENSDARG00000005458 2917 1.604 - - - - - 0.872 0.732 - - casein kinase 1, gamma 2a [Source:ZFIN;Acc:ZDB-GENE-030131-6445]
13. tgm1l4 ENSDARG00000101407 800 1.603 - - - - - 0.813 0.790 - - transglutaminase 1 like 4 [Source:ZFIN;Acc:ZDB-GENE-050913-29]
14. tmem101 ENSDARG00000114508 494 1.603 - - - 0.755 - 0.848 - - - transmembrane protein 101 [Source:ZFIN;Acc:ZDB-GENE-121214-289]
15. C17H15orf57 C17H15orf57 1366 1.598 - 0.708 - - - 0.890 - - -
16. safb ENSDARG00000020467 5608 1.597 - - - - - 0.857 - - 0.740 scaffold attachment factor B [Source:ZFIN;Acc:ZDB-GENE-030131-698]
17. cnot8 ENSDARG00000020043 866 1.596 - - - - - 0.868 - 0.728 - CCR4-NOT transcription complex, subunit 8 [Source:ZFIN;Acc:ZDB-GENE-040426-2845]
18. prdm4 ENSDARG00000017366 454 1.593 - - - 0.758 - 0.835 - - - PR domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-041210-131]
19. sp4 ENSDARG00000005186 2904 1.584 - - - - - 0.835 - - 0.749 sp4 transcription factor [Source:ZFIN;Acc:ZDB-GENE-031202-3]
20. ZNF710 ZNF710 766 1.583 - 0.813 - 0.770 - - - - -
21. rassf9 ENSDARG00000074721 448 1.581 0.773 - - - - 0.808 - - - Ras association (RalGDS/AF-6) domain family (N-terminal) member 9 [Source:ZFIN;Acc:ZDB-GENE-091204-470]
22. ctcf ENSDARG00000056621, ENSDARG00000113285 1750 1.575 - - - - - 0.846 - - 0.729 CCCTC-binding factor (zinc finger protein) [Source:ZFIN;Acc:ZDB-GENE-040624-5]
23. gtf2e2 ENSDARG00000012672, ENSDARG00000109689, ENSDARG00000115211 1677 1.571 - - - - - 0.835 0.736 - - general transcription factor IIE, polypeptide 2, beta [Source:ZFIN;Acc:ZDB-GENE-030131-6794]
24. CABZ01005777.1 CABZ01005777.1 505 1.568 - - - 0.782 - 0.786 - - -
25. atg4a ENSDARG00000014531 481 1.559 - - - 0.755 - - 0.804 - - autophagy related 4A, cysteine peptidase [Source:ZFIN;Acc:ZDB-GENE-050522-430]
26. cobl_1 ENSDARG00000091006 293 1.559 0.740 - - - - 0.819 - - - cordon-bleu WH2 repeat protein [Source:ZFIN;Acc:ZDB-GENE-091020-11]
27. si:ch211-183d21.1 ENSDARG00000092499 1071 1.554 - - - - - 0.845 0.709 - - si:ch211-183d21.1 [Source:ZFIN;Acc:ZDB-GENE-030131-8516]
28. znf750 ENSDARG00000102267 327 1.553 - 0.729 - - - 0.824 - - - zinc finger protein 750 [Source:ZFIN;Acc:ZDB-GENE-050417-313]
29. gtf2e1 ENSDARG00000000542, ENSDARG00000115244 899 1.548 - - - - - 0.838 - - 0.710 general transcription factor IIE, polypeptide 1, alpha [Source:ZFIN;Acc:ZDB-GENE-041210-221]
30. rbm14a ENSDARG00000012723, ENSDARG00000114603 3802 1.545 - - - - - - 0.790 - 0.755 RNA binding motif protein 14a [Source:ZFIN;Acc:ZDB-GENE-050522-496]
31. si:ch211-86h15.1 ENSDARG00000074098 354 1.539 - - - - - 0.838 0.701 - - si:ch211-86h15.1 [Source:ZFIN;Acc:ZDB-GENE-081107-38]
32. mesdc2 776 1.537 - 0.718 - - - 0.819 - - - mesoderm development candidate 2, transcript variant X2
33. setd8b 2528 1.534 - - - 0.769 - 0.765 - - - SET domain containing (lysine methyltransferase) 8b
34. fmnl3 ENSDARG00000004372 821 1.532 - - - 0.720 - - 0.812 - - formin-like 3 [Source:ZFIN;Acc:ZDB-GENE-030131-1571]
35. s100z ENSDARG00000038729 442 1.531 - - - 0.762 - 0.769 - - - S100 calcium binding protein Z [Source:ZFIN;Acc:ZDB-GENE-050522-69]
36. g2e3 ENSDARG00000001313 1485 1.531 - - - 0.727 - 0.804 - - - G2/M-phase specific E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-030616-400]
37. klf2a ENSDARG00000042667, ENSDARG00000113441 588 1.519 - - - 0.715 - 0.804 - - - Kruppel-like factor 2a [Source:ZFIN;Acc:ZDB-GENE-011109-1]
38. CR387996.2 CR387996.2 1272 1.516 - - - 0.703 - - 0.813 - -
39. rfwd2 740 1.515 - - - 0.765 - - 0.750 - - ring finger and WD repeat domain 2, transcript variant X1
40. CEP85 ENSDARG00000060215 537 1.514 - - - - - 0.780 0.734 - - centrosomal protein 85 [Source:ZFIN;Acc:ZDB-GENE-030131-1998]
41. cdk6 ENSDARG00000070228 1778 1.51 - - - - - - 0.795 - 0.715 cyclin-dependent kinase 6 [Source:ZFIN;Acc:ZDB-GENE-060503-786]
42. CABZ01067868.1 CABZ01067868.1 235 1.5 - 0.791 - 0.709 - - - - -
43. rab11fip1b ENSDARG00000036462 466 1.494 - 0.712 - - - 0.782 - - - RAB11 family interacting protein 1 (class I) b [Source:ZFIN;Acc:ZDB-GENE-091204-322]
44. klhl23 ENSDARG00000078475 92 1.489 - 0.716 - 0.773 - - - - - kelch-like family member 23 [Source:ZFIN;Acc:ZDB-GENE-081104-458]
45. PRSS23 ENSDARG00000055786 564 1.487 - - - 0.710 - 0.777 - - - serine protease 23 [Source:ZFIN;Acc:ZDB-GENE-030131-9149]
46. itpkca ENSDARG00000002994 710 1.487 - 0.725 - - - 0.762 - - - inositol-trisphosphate 3-kinase Ca [Source:ZFIN;Acc:ZDB-GENE-030131-6009]
47. matr3l1.1_1 ENSDARG00000000394, ENSDARG00000001162 1860 1.483 - - - - - 0.773 - - 0.710 matrin 3-like 1.1 [Source:ZFIN;Acc:ZDB-GENE-030616-40]
48. cnot1 ENSDARG00000004174, ENSDARG00000109411 4625 1.47 - - - - - 0.703 0.767 - - CCR4-NOT transcription complex, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-040915-1]
49. rif1 ENSDARG00000062650, ENSDARG00000110568 1751 1.47 - 0.725 - - - 0.745 - - - replication timing regulatory factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3406]
50. apopt1 ENSDARG00000092473 682 1.469 - 0.762 - 0.707 - - - - - apoptogenic 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-090313-66]
51. fhl3b ENSDARG00000104315 359 1.469 0.723 0.746 - - - - - - - four and a half LIM domains 3b [Source:ZFIN;Acc:ZDB-GENE-030131-8356]
52. lxn ENSDARG00000043102 415 1.467 - - - - - 0.765 0.702 - - latexin [Source:ZFIN;Acc:ZDB-GENE-041212-18]
53. lppr3a lppr3a 1294 1.462 - 0.732 - - - - - - 0.730
54. serinc1 ENSDARG00000009106 10571 1.461 - - - 0.736 - - - - 0.725 serine incorporator 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4415]
55. rhot2 ENSDARG00000056328 1123 1.45 - - - 0.737 - 0.713 - - - ras homolog family member T2 [Source:ZFIN;Acc:ZDB-GENE-051120-96]
56. tnpo2 ENSDARG00000038239 2469 1.449 - - - - - 0.736 0.713 - - transportin 2 (importin 3, karyopherin beta 2b) [Source:ZFIN;Acc:ZDB-GENE-040822-16]
57. npm1a ENSDARG00000014329, ENSDARG00000113199 31910 1.448 - - - - - - 0.732 - 0.716 nucleophosmin 1a [Source:ZFIN;Acc:ZDB-GENE-021028-1]
58. dynlt1 ENSDARG00000045909 2451 1.443 - 0.710 - - - - 0.733 - - dynein, light chain, Tctex-type 1 [Source:ZFIN;Acc:ZDB-GENE-041210-9]
59. si:dkeyp-44a8.2 ENSDARG00000092493 8308 1.433 - - - - - - 0.719 - 0.714 si:dkeyp-44a8.2 [Source:ZFIN;Acc:ZDB-GENE-070705-542]
60. zgc:158614 zgc:158614 312 1.427 - 0.722 - - - 0.705 - - -
61. rad54l2 ENSDARG00000063031 821 1.421 - - - 0.709 - - 0.712 - - RAD54 like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3097]
62. ccdc25 ENSDARG00000021753 3837 0.904 - - - - - 0.904 - - - coiled-coil domain containing 25 [Source:ZFIN;Acc:ZDB-GENE-040426-1389]
63. sec61g ENSDARG00000018637, ENSDARG00000117172 4899 0.902 - - - - - 0.902 - - - Sec61 translocon gamma subunit [Source:ZFIN;Acc:ZDB-GENE-040718-203]
64. pik3r2 ENSDARG00000018060, ENSDARG00000112255 3899 0.902 - - - - - 0.902 - - - phosphoinositide-3-kinase, regulatory subunit 2 (beta) [Source:ZFIN;Acc:ZDB-GENE-040309-1]
65. lin52 ENSDARG00000070833 2271 0.9 - - - - - 0.900 - - - lin-52 DREAM MuvB core complex component [Source:ZFIN;Acc:ZDB-GENE-061110-82]
66. lamtor5 ENSDARG00000090194, ENSDARG00000115255 2539 0.898 - - - - - 0.898 - - - late endosomal/lysosomal adaptor, MAPK and MTOR activator 5 [Source:ZFIN;Acc:ZDB-GENE-110411-193]
67. ddx23 ENSDARG00000021945, ENSDARG00000116153 2265 0.897 - - - - - 0.897 - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [Source:ZFIN;Acc:ZDB-GENE-030131-6215]
68. ccnk ENSDARG00000034146 1255 0.896 - - - - - 0.896 - - - cyclin K [Source:ZFIN;Acc:ZDB-GENE-030131-5126]
69. psmb6 ENSDARG00000002240 8015 0.896 - - - - - 0.896 - - - proteasome subunit beta 6 [Source:ZFIN;Acc:ZDB-GENE-990415-216]
70. si:ch211-282j22.3 ENSDARG00000010524 1007 0.896 - - - - - - 0.896 - - si:ch211-282j22.3 [Source:ZFIN;Acc:ZDB-GENE-091113-49]
71. oafa ENSDARG00000075851 2015 0.895 - - - - - 0.895 - - - OAF homolog a (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-090917-1]
72. tefb ENSDARG00000098103 370 0.89 - - - - - 0.890 - - - thyrotrophic embryonic factor b [Source:ZFIN;Acc:ZDB-GENE-050522-224]
73. arl4aa ENSDARG00000099918 1391 0.889 - - - - - 0.889 - - - ADP-ribosylation factor-like 4aa [Source:ZFIN;Acc:ZDB-GENE-040426-1878]
74. snrpd3 ENSDARG00000013800, ENSDARG00000112203 3334 0.884 - - - - - 0.884 - - - small nuclear ribonucleoprotein D3 polypeptide [Source:ZFIN;Acc:ZDB-GENE-040625-55]
75. dnajc5ga ENSDARG00000041896 1478 0.884 - - - - - 0.884 - - - DnaJ (Hsp40) homolog, subfamily C, member 5 gamma a [Source:ZFIN;Acc:ZDB-GENE-030131-1583]
76. rbm34 ENSDARG00000101877 1573 0.884 - - - - - 0.884 - - - RNA binding motif protein 34 [Source:ZFIN;Acc:ZDB-GENE-040718-77]
77. wnt9b ENSDARG00000037889 768 0.883 - - - - - 0.883 - - - wingless-type MMTV integration site family, member 9B [Source:ZFIN;Acc:ZDB-GENE-080201-1]
78. tsn ENSDARG00000041830, ENSDARG00000111147 1268 0.883 - - - - - - 0.883 - - translin [Source:ZFIN;Acc:ZDB-GENE-030131-6039]
79. C6H2orf40 C6H2orf40 4224 0.883 - - - - - 0.883 - - -
80. NFATC3 NFATC3 1712 0.882 - - - - - 0.882 - - -
81. ccnb1 ENSDARG00000051923 3226 0.882 - - - - - 0.882 - - - cyclin B1 [Source:ZFIN;Acc:ZDB-GENE-000406-10]
82. actr2a ENSDARG00000052438 5838 0.881 - - - - - 0.881 - - - ARP2 actin related protein 2a homolog [Source:ZFIN;Acc:ZDB-GENE-040426-2894]
83. si:ch211-193k19.1 ENSDARG00000035660 636 0.881 - - - - - 0.881 - - - si:ch211-193k19.1 [Source:ZFIN;Acc:ZDB-GENE-060503-110]
84. gro2 gro2 1404 0.88 - - - - - - 0.880 - -
85. mrpl24 ENSDARG00000019222 798 0.879 - - - - - 0.879 - - - mitochondrial ribosomal protein L24 [Source:ZFIN;Acc:ZDB-GENE-040718-98]
86. rab35 rab35 1287 0.879 - - - - - 0.879 - - -
87. nus1 ENSDARG00000027813 1417 0.877 - - - - - 0.877 - - - NUS1, dehydrodolichyl diphosphate synthase subunit [Source:ZFIN;Acc:ZDB-GENE-040718-48]
88. si:ch211-191j22.3 ENSDARG00000095459 959 0.876 - - - - - 0.876 - - - si:ch211-191j22.3 [Source:ZFIN;Acc:ZDB-GENE-030131-4242]
89. fam91a1 ENSDARG00000003320, ENSDARG00000116699 1566 0.875 - - - - - 0.875 - - - family with sequence similarity 91, member A1 [Source:ZFIN;Acc:ZDB-GENE-040426-1187]
90. st3gal5 ENSDARG00000037556, ENSDARG00000109884 662 0.873 - - - - - - 0.873 - - ST3 beta-galactoside alpha-2,3-sialyltransferase 5 [Source:ZFIN;Acc:ZDB-GENE-060322-1]
91. C2H6orf52 C2H6orf52 2847 0.873 - - - - - 0.873 - - -
92. nod2 ENSDARG00000010756 294 0.872 - - - - - 0.872 - - - nucleotide-binding oligomerization domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-061108-4]
93. cdc20 ENSDARG00000100741 3264 0.872 - - - - - 0.872 - - - cell division cycle 20 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-2044]
94. faf1 ENSDARG00000022418 2922 0.872 - - - - - 0.872 - - - Fas (TNFRSF6) associated factor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2863]
95. FP103059.1 FP103059.1 750 0.871 - - - - - 0.871 - - -
96. rfx1b ENSDARG00000075904 1175 0.871 - - - - - 0.871 - - - regulatory factor X, 1b (influences HLA class II expression) [Source:ZFIN;Acc:ZDB-GENE-041008-101]
97. ppt1 ENSDARG00000039980 1599 0.871 - - - - - 0.871 - - - palmitoyl-protein thioesterase 1 (ceroid-lipofuscinosis, neuronal 1, infantile) [Source:ZFIN;Acc:ZDB-GENE-040426-2653]
98. klhl11 ENSDARG00000045130 800 0.87 - - - - - 0.870 - - - kelch-like family member 11 [Source:ZFIN;Acc:ZDB-GENE-030131-5524]
99. mmaa ENSDARG00000060383, ENSDARG00000110058, ENSDARG00000115228 317 0.87 - - - - - - 0.870 - - methylmalonic aciduria (cobalamin deficiency) cblA type [Source:ZFIN;Acc:ZDB-GENE-070928-15]
100. zmym4 ENSDARG00000035823 347 0.87 - - - - - 0.870 - - - zinc finger, MYM-type 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5459]

There are 1358 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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