Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for efemp2b

Gene Name Gene ID Reads Annotation
efemp2b ENSDARG00000020811 116 EGF containing fibulin extracellular matrix protein 2b [Source:ZFIN;Acc:ZDB-GENE-030219-125]










Genes with expression patterns similar to efemp2b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. efemp2b ENSDARG00000020811 116 8 1.000 1.000 1.000 1.000 1.000 - 1.000 1.000 1.000 EGF containing fibulin extracellular matrix protein 2b [Source:ZFIN;Acc:ZDB-GENE-030219-125]
2. efcab2 ENSDARG00000074323 88 2.274 0.740 - - - - - 0.801 0.733 - EF-hand calcium binding domain 2 [Source:ZFIN;Acc:ZDB-GENE-070521-5]
3. SNORD18_2 SNORD18_2 7 2 1.000 - - - - - 1.000 - -
4. dyx1c1 dyx1c1 36 1.868 0.941 - - - - - 0.927 - -
5. si:ch211-250m6.8 si:ch211-250m6.8 51 1.86 0.860 - - - - - 1.000 - -
6. ttc12 ENSDARG00000056896 97 1.859 1.000 - - - - - 0.859 - - tetratricopeptide repeat domain 12 [Source:ZFIN;Acc:ZDB-GENE-071016-4]
7. esr2b ENSDARG00000034181 20 1.85 1.000 - - - - - 0.850 - - estrogen receptor 2b [Source:ZFIN;Acc:ZDB-GENE-030116-1]
8. si:ch211-244b2.3 ENSDARG00000069244 19 1.846 0.846 - - - - - 1.000 - - si:ch211-244b2.3 [Source:ZFIN;Acc:ZDB-GENE-030131-4737]
9. si:dkey-3h3.3 ENSDARG00000067718 225 1.834 1.000 - - - - - 0.834 - - si:dkey-3h3.3 [Source:ZFIN;Acc:ZDB-GENE-060526-299]
10. si:ch211-131e11.14 si:ch211-131e11.14 7 1.825 0.825 - - - - - 1.000 - -
11. ggh ENSDARG00000037176 9 1.825 0.825 - - - - - 1.000 - - gamma-glutamyl hydrolase (conjugase, folylpolygammaglutamyl hydrolase) [Source:ZFIN;Acc:ZDB-GENE-040426-2615]
12. wasb ENSDARG00000026350 139 1.812 0.812 - - - - - 1.000 - - Wiskott-Aldrich syndrome (eczema-thrombocytopenia) b [Source:ZFIN;Acc:ZDB-GENE-030131-7098]
13. pabpn1l ENSDARG00000087996, ENSDARG00000113382 40 1.796 1.000 - - - - - - - 0.796 poly(A) binding protein, nuclear 1-like (cytoplasmic) [Source:ZFIN;Acc:ZDB-GENE-080709-5]
14. tbx16 ENSDARG00000007329 255 1.778 - - - 0.897 - - 0.881 - - T-box 16 [Source:ZFIN;Acc:ZDB-GENE-990615-5]
15. CABZ01061549.1 CABZ01061549.1 17 1.778 1.000 0.778 - - - - - - -
16. fam207a ENSDARG00000071500 106 1.776 0.776 - - - - - 1.000 - - family with sequence similarity 207, member A [Source:ZFIN;Acc:ZDB-GENE-060825-113]
17. ntn1b ENSDARG00000022531 248 1.771 0.893 0.878 - - - - - - - netrin 1b [Source:ZFIN;Acc:ZDB-GENE-990415-168]
18. e2f5 ENSDARG00000038812 388 1.75 1.000 - - - - - - 0.750 - E2F transcription factor 5 [Source:ZFIN;Acc:ZDB-GENE-030828-3]
19. eva1bb ENSDARG00000100698 223 1.745 1.000 - - - - - - 0.745 - eva-1 homolog Bb (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-080204-108]
20. zgc:174698 ENSDARG00000075731, ENSDARG00000077266, ENSDARG00000098236 24 1.741 - - - - - - 1.000 0.741 - zgc:174698 [Source:ZFIN;Acc:ZDB-GENE-080204-74]
21. entpd2a.1 ENSDARG00000035506 14 1.714 0.860 - - - - - 0.854 - - ectonucleoside triphosphate diphosphohydrolase 2a, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-040724-187]
22. ggt1b ENSDARG00000018342 49 1.711 - 1.000 - - - - 0.711 - - gamma-glutamyltransferase 1b [Source:ZFIN;Acc:ZDB-GENE-110408-13]
23. mfsd4b ENSDARG00000079571 556 1.688 - 0.820 - - - - 0.868 - - major facilitator superfamily domain containing 4B [Source:ZFIN;Acc:ZDB-GENE-070410-26]
24. dph2 ENSDARG00000078077 36 1.688 - 0.854 - - - - 0.834 - - DPH2 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030219-100]
25. cdkl1 ENSDARG00000017329 3345 1.687 0.830 - - 0.857 - - - - - cyclin-dependent kinase-like 1 (CDC2-related kinase) [Source:ZFIN;Acc:ZDB-GENE-040808-34]
26. pih1d3 ENSDARG00000038612, ENSDARG00000116391, ENSDARG00000116607 57 1.673 0.860 - - - - - 0.813 - - PIH1 domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040722-2]
27. ace ENSDARG00000079166 54 1.668 - 0.849 - - - - 0.819 - - angiotensin I converting enzyme (peptidyl-dipeptidase A) 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1826]
28. bicc2 ENSDARG00000076557 77 1.668 0.959 - 0.709 - - - - - - bicaudal C homolog 2 [Source:ZFIN;Acc:ZDB-GENE-110110-3]
29. si:ch73-367f21.5 ENSDARG00000089503 55 1.667 - 0.810 - - - - 0.857 - - si:ch73-367f21.5 [Source:ZFIN;Acc:ZDB-GENE-120214-29]
30. ccdc113 ENSDARG00000006981 67 1.648 - - - - 0.756 - 0.892 - - coiled-coil domain containing 113 [Source:ZFIN;Acc:ZDB-GENE-041010-163]
31. adgb ENSDARG00000005595 118 1.633 - - - - - - 0.886 - 0.747 androglobin [Source:ZFIN;Acc:ZDB-GENE-041001-205]
32. rsph4a ENSDARG00000067606 132 1.633 - 0.734 - 0.899 - - - - - radial spoke head component 4A [Source:ZFIN;Acc:ZDB-GENE-030131-7437]
33. GALNT16 ENSDARG00000053190 250 1.617 - - - 0.819 - - - 0.798 - UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 16 [Source:ZFIN;Acc:ZDB-GENE-131120-189]
34. hoxa13a ENSDARG00000100312 543 1.613 - - 0.763 0.850 - - - - - homeobox A13a [Source:ZFIN;Acc:ZDB-GENE-990415-5]
35. si:dkey-114c15.5 ENSDARG00000095150 70 1.612 - 0.778 - - - - 0.834 - - si:dkey-114c15.5 [Source:ZFIN;Acc:ZDB-GENE-060531-72]
36. si:dkey-204f11.49p si:dkey-204f11.49p 97 1.604 - - - 0.778 - - 0.826 - -
37. emilin3a ENSDARG00000078052 1652 1.595 - 0.762 - - - - - 0.833 - elastin microfibril interfacer 3a [Source:ZFIN;Acc:ZDB-GENE-080612-2]
38. pdzk1ip1l pdzk1ip1l 171 1.58 - 0.864 - - - - 0.716 - -
39. efemp2b_1 ENSDARG00000020811 77 1.577 - 0.820 - - - - - - 0.757 EGF containing fibulin extracellular matrix protein 2b [Source:ZFIN;Acc:ZDB-GENE-030219-125]
40. det1 ENSDARG00000098247 250 1.56 - - - 0.815 - - 0.745 - - DET1, COP1 ubiquitin ligase partner [Source:ZFIN;Acc:ZDB-GENE-030131-2809]
41. dcaf17 ENSDARG00000074909 913 1.559 - - - 0.827 0.732 - - - - ddb1 and cul4 associated factor 17 [Source:ZFIN;Acc:ZDB-GENE-071008-1]
42. tmem237a ENSDARG00000041735 13 1.551 - - - - - - 0.834 - 0.717 transmembrane protein 237a [Source:ZFIN;Acc:ZDB-GENE-070402-3]
43. sp5l ENSDARG00000115868 361 1.545 - - - - 0.778 - - 0.767 - Sp5 transcription factor-like [Source:ZFIN;Acc:ZDB-GENE-030131-2981]
44. SLC28A2 SLC28A2 21 1.535 - 0.768 - - - - 0.767 - -
45. BX511121.1 ENSDARG00000029997 1774 1.531 - - - 0.806 - - - 0.725 -
46. THEM4 ENSDARG00000061621 364 1.531 0.705 - - 0.826 - - - - - thioesterase superfamily member 4 [Source:ZFIN;Acc:ZDB-GENE-070112-982]
47. APOLD1 APOLD1 56 1.526 - 0.762 - - - - 0.764 - -
48. COL13A1 1565 1.519 - - - 0.797 0.722 - - - - collagen, type XIII, alpha 1, transcript variant X1
49. SLC15A5 ENSDARG00000089974 18 1.516 - 0.759 - - - - - - 0.757 solute carrier family 15 member 5 [Source:HGNC Symbol;Acc:HGNC:33455]
50. nkx2.2a ENSDARG00000053298 747 1.51 0.763 0.747 - - - - - - - NK2 homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-980526-403]
51. C21H11orf70 C21H11orf70 83 1.495 0.724 - - - - - - 0.771 -
52. CABZ01074181.1 CABZ01074181.1 396 1.492 - 0.720 - - - - 0.772 - -
53. pkn3 ENSDARG00000079585 521 1.488 - - - 0.759 - - - 0.729 - protein kinase N3 [Source:ZFIN;Acc:ZDB-GENE-030131-1902]
54. RSPH1 289 1.487 - - - 0.769 - - 0.718 - - radial spoke head 1 homolog (Chlamydomonas), transcript variant X2
55. hoxc13a ENSDARG00000070353 4815 1.486 - - - 0.749 0.737 - - - - homeobox C13a [Source:ZFIN;Acc:ZDB-GENE-000822-4]
56. ankmy1 ENSDARG00000062702 52 1.484 - - - - - - 0.740 0.744 - ankyrin repeat and MYND domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050208-740]
57. dmd ENSDARG00000008487, ENSDARG00000115779 536 1.483 - 0.757 - 0.726 - - - - - dystrophin [Source:ZFIN;Acc:ZDB-GENE-010426-1]
58. fgf20a ENSDARG00000007356, ENSDARG00000114219 25 1.482 - 0.778 - - - - 0.704 - - fibroblast growth factor 20a [Source:ZFIN;Acc:ZDB-GENE-060110-1]
59. CU658147.1 CU658147.1 69 1.459 0.751 0.708 - - - - - - -
60. knstrn ENSDARG00000074379 374 1.445 - - - - - - 0.724 0.721 - kinetochore localized astrin (SPAG5) binding protein [Source:ZFIN;Acc:ZDB-GENE-081022-187]
61. sp9 ENSDARG00000099374 2266 1.439 - - - 0.730 0.709 - - - - sp9 transcription factor [Source:ZFIN;Acc:ZDB-GENE-040426-2313]
62. tfap2e ENSDARG00000008861 497 1.431 - 0.702 - - - - 0.729 - - transcription factor AP-2 epsilon [Source:ZFIN;Acc:ZDB-GENE-040426-1455]
63. eve1 ENSDARG00000056012 144 1.421 - - 0.721 - 0.700 - - - - even-skipped-like1 [Source:ZFIN;Acc:ZDB-GENE-980526-69]
64. wdr27_1 ENSDARG00000053386 1 1 - - - - - - 1.000 - - WD repeat domain 27 [Source:ZFIN;Acc:ZDB-GENE-051120-93]
65. PPHLN1 ENSDARG00000045692 4 1 - - - - - - 1.000 - - periphilin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1873]
66. si:ch211-188i4.4 5 1 1.000 - - - - - - - - si:ch211-188i4.4, transcript variant X3
67. bmp1b ENSDARG00000028053 25 1 1.000 - - - - - - - - bone morphogenetic protein 1b [Source:ZFIN;Acc:ZDB-GENE-060818-2]
68. CR339057.1 CR339057.1 7 1 - - - - - - 1.000 - -
69. si:dkey-179j5.5 ENSDARG00000074538, ENSDARG00000116016, ENSDARG00000116908 1 1 - - - - - - 1.000 - - si:dkey-179j5.5 [Source:ZFIN;Acc:ZDB-GENE-070705-320]
70. klc4_1 ENSDARG00000086985 22 1 - - - - - - 1.000 - - kinesin light chain 4 [Source:ZFIN;Acc:ZDB-GENE-050417-350]
71. tas1r3 ENSDARG00000006341 3 1 1.000 - - - - - - - - taste receptor, type 1, member 3 [Source:ZFIN;Acc:ZDB-GENE-070917-3]
72. 5S_rRNA_10 5S_rRNA_10 2 1 - - - - - - 1.000 - -
73. ucn3l ENSDARG00000087241 29 1 1.000 - - - - - - - - urocortin 3, like [Source:ZFIN;Acc:ZDB-GENE-060130-250]
74. taar19d ENSDARG00000115081 2 1 - - - - - - 1.000 - - trace amine associated receptor 19d [Source:ZFIN;Acc:ZDB-GENE-060413-18]
75. coch ENSDARG00000024032 7 1 - - - - - - 1.000 - - coagulation factor C homolog, cochlin (Limulus polyphemus) [Source:ZFIN;Acc:ZDB-GENE-030616-403]
76. BX465203.1 ENSDARG00000113985 8 1 1.000 - - - - - - - -
77. nipbla ENSDARG00000098272 26 1 1.000 - - - - - - - - nipped-B homolog a (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-060526-121]
78. CR381673.2 ENSDARG00000103241 7 1 - - - - - - 1.000 - -
79. CT025934.2 CT025934.2 22 1 - - - - - - 1.000 - -
80. lrp6 ENSDARG00000100143 1 1 - - - - - - 1.000 - - low density lipoprotein receptor-related protein 6 [Source:ZFIN;Acc:ZDB-GENE-090821-1]
81. cx28.9 ENSDARG00000041797 12 1 - - - - - - 1.000 - - connexin 28.9 [Source:ZFIN;Acc:ZDB-GENE-041114-200]
82. RBM11 ENSDARG00000090202 15 1 1.000 - - - - - - - - RNA binding motif protein 11 [Source:ZFIN;Acc:ZDB-GENE-091204-317]
83. alkbh7 ENSDARG00000037906 9 1 - - - - - - 1.000 - - alkB homolog 7 [Source:ZFIN;Acc:ZDB-GENE-050417-78]
84. cd74a ENSDARG00000009087 20 1 - - - - - - 1.000 - - CD74 molecule, major histocompatibility complex, class II invariant chain a [Source:ZFIN;Acc:ZDB-GENE-000901-1]
85. BX649498.2 BX649498.2 40 1 1.000 - - - - - - - -
86. si:ch211-160d14.9 8 1 - - - - - - 1.000 - - si:ch211-160d14.9, transcript variant X1
87. CR388152.1 CR388152.1 7 1 - - - - - - 1.000 - -
88. BX530067.1 BX530067.1 20 1 - - - - - - 1.000 - -
89. rdh1 ENSDARG00000017882 24 1 - - - - - - 1.000 - - retinol dehydrogenase 1 [Source:ZFIN;Acc:ZDB-GENE-030912-15]
90. FAM78A FAM78A 61 1 - 1.000 - - - - - - -
91. si:dkey-161j23.5 ENSDARG00000094441 11 1 1.000 - - - - - - - - si:dkey-161j23.5 [Source:ZFIN;Acc:ZDB-GENE-091204-373]
92. lars2 ENSDARG00000075337 31 1 1.000 - - - - - - - - leucyl-tRNA synthetase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-070928-3]
93. CABZ01112732.1 ENSDARG00000068453 4 1 - - - - - - 1.000 - - tripartite motif-containing protein 14-like [Source:NCBI gene;Acc:100329480]
94. fbxo16 ENSDARG00000033949 35 1 1.000 - - - - - - - - F-box protein 16 [Source:ZFIN;Acc:ZDB-GENE-041015-747]
95. ARMC6 ENSDARG00000103770 39 1 1.000 - - - - - - - - armadillo repeat containing 6 [Source:HGNC Symbol;Acc:HGNC:25049]
96. RGS14 RGS14 15 1 - - - - - - 1.000 - -
97. CABZ01066439.2 CABZ01066439.2 5 1 1.000 - - - - - - - -
98. gpr158 gpr158 52 1 - - - - - - 1.000 - -
99. si:dkeyp-75b4.10 ENSDARG00000079043 7 1 - - - - - - 1.000 - - si:dkeyp-75b4.10 [Source:ZFIN;Acc:ZDB-GENE-090313-394]
100. SOX8 SOX8 22 1 - - - - - - 1.000 - -

There are 1294 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA