Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for edc4

Gene Name Gene ID Reads Annotation
edc4 ENSDARG00000062266, ENSDARG00000114070 2505 enhancer of mRNA decapping 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5032]










Genes with expression patterns similar to edc4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. edc4 ENSDARG00000062266, ENSDARG00000114070 2505 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 enhancer of mRNA decapping 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5032]
2. prpf8 ENSDARG00000026180 7026 2.928 - - 0.713 0.745 - 0.714 - - 0.756 pre-mRNA processing factor 8 [Source:ZFIN;Acc:ZDB-GENE-030131-577]
3. ppig ENSDARG00000044431 3427 2.574 - - 0.788 0.822 - - - - 0.964 peptidylprolyl isomerase G (cyclophilin G) [Source:ZFIN;Acc:ZDB-GENE-040426-2822]
4. smn1 ENSDARG00000018494 1024 2.487 - - - 0.807 0.974 - 0.706 - - survival of motor neuron 1, telomeric [Source:ZFIN;Acc:ZDB-GENE-990715-16]
5. smo ENSDARG00000002952 6411 2.472 - - - 0.787 0.977 - 0.708 - - smoothened, frizzled class receptor [Source:ZFIN;Acc:ZDB-GENE-980526-89]
6. SENP1 SENP1 1122 2.459 - - 0.731 - 0.979 - 0.749 - -
7. zgc:85777 ENSDARG00000027009, ENSDARG00000112673 1499 2.413 - 0.731 - - - - 0.723 - 0.959 zgc:85777 [Source:ZFIN;Acc:ZDB-GENE-040426-2210]
8. ppp4ca ENSDARG00000070570 8395 2.409 - - 0.731 - 0.958 - 0.720 - - protein phosphatase 4, catalytic subunit a [Source:ZFIN;Acc:ZDB-GENE-030131-4433]
9. zgc:158343 ENSDARG00000099411, ENSDARG00000110524, ENSDARG00000110558, ENSDARG00000112808 1061 2.391 - - - 0.700 - 0.739 - - 0.952 zgc:158343 [Source:ZFIN;Acc:ZDB-GENE-061201-9]
10. si:ch211-51e12.7 ENSDARG00000045914 9598 2.273 - - - - 0.780 0.768 - - 0.725 si:ch211-51e12.7 [Source:ZFIN;Acc:ZDB-GENE-030131-8279]
11. babam1 ENSDARG00000077526 776 2.15 - 0.706 - 0.719 - 0.725 - - - BRISC and BRCA1 A complex member 1 [Source:ZFIN;Acc:ZDB-GENE-040808-6]
12. apc ENSDARG00000058868 2605 1.875 - - - - 0.951 - - - 0.924 adenomatous polyposis coli [Source:ZFIN;Acc:ZDB-GENE-031112-7]
13. CR759921.2 CR759921.2 583 1.853 - - - - 0.963 0.890 - - -
14. pan3 ENSDARG00000031637, ENSDARG00000111004 613 1.825 - - - - 0.962 0.863 - - - poly(A) specific ribonuclease subunit PAN3 [Source:ZFIN;Acc:ZDB-GENE-070928-13]
15. ccdc22 ENSDARG00000052379 2276 1.789 - 0.834 - - - - - - 0.955 coiled-coil domain containing 22 [Source:ZFIN;Acc:ZDB-GENE-050913-93]
16. rab5b ENSDARG00000016059, ENSDARG00000114966 1252 1.788 - - - - 0.954 0.834 - - - RAB5B, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-040426-2593]
17. abi1a ENSDARG00000010155 5631 1.786 - - - - 0.880 - - - 0.906 abl-interactor 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1701]
18. utp11l ENSDARG00000039958, ENSDARG00000109895 1509 1.782 - 0.821 - - - - - - 0.961 UTP11-like, U3 small nucleolar ribonucleoprotein (yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-8093]
19. ing5b ENSDARG00000068175 2502 1.771 - - - - 0.945 - 0.826 - - inhibitor of growth family, member 5b [Source:ZFIN;Acc:ZDB-GENE-030616-462]
20. MANBAL ENSDARG00000059853 636 1.766 - - - - 0.967 0.799 - - - mannosidase beta like [Source:ZFIN;Acc:ZDB-GENE-161222-1]
21. tom1l2 ENSDARG00000009217, ENSDARG00000111492 1639 1.765 - - - - 0.957 - 0.808 - - target of myb1 like 2 membrane trafficking protein [Source:ZFIN;Acc:ZDB-GENE-061013-3]
22. C18H12orf23 C18H12orf23 5362 1.764 - - - - 0.839 - - - 0.925
23. TUBB8P7_1 TUBB8P7_1 2722 1.758 - - - - 0.980 - - - 0.778
24. nup188 ENSDARG00000030022 2398 1.752 - - - 0.780 - - - - 0.972 nucleoporin 188 [Source:ZFIN;Acc:ZDB-GENE-030131-7184]
25. larp7 ENSDARG00000017315 1194 1.749 - - - 0.780 0.969 - - - - La ribonucleoprotein domain family, member 7 [Source:ZFIN;Acc:ZDB-GENE-030131-6896]
26. CR548630.1 CR548630.1 3301 1.747 - - - 0.787 0.960 - - - -
27. UBE2QL1 ENSDARG00000079276 3474 1.743 - - - 0.770 0.973 - - - - ubiquitin-conjugating enzyme E2Q family-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8137]
28. aatf ENSDARG00000025467, ENSDARG00000109548 796 1.736 - - - - 0.977 0.759 - - - apoptosis antagonizing transcription factor [Source:ZFIN;Acc:ZDB-GENE-030131-9654]
29. phf10 ENSDARG00000070084 1210 1.735 - - - 0.814 - 0.921 - - - PHD finger protein 10 [Source:ZFIN;Acc:ZDB-GENE-040426-1573]
30. adprhl2 ENSDARG00000019338, ENSDARG00000110712 652 1.729 - - - 0.763 - - - - 0.966 ADP-ribosylhydrolase like 2 [Source:ZFIN;Acc:ZDB-GENE-040912-85]
31. exoc3l4 ENSDARG00000058180 923 1.728 - 0.763 - - 0.965 - - - - exocyst complex component 3-like 4 [Source:ZFIN;Acc:ZDB-GENE-081028-71]
32. myl12.2 ENSDARG00000025326 1887 1.725 - 0.760 - - - - - - 0.965 myosin, light chain 12, genome duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9028]
33. FAM114A2 ENSDARG00000079508 1226 1.72 - - - 0.757 - - - - 0.963 family with sequence similarity 114, member A2 [Source:ZFIN;Acc:ZDB-GENE-030131-6308]
34. tbl1x ENSDARG00000060438 1386 1.719 - - - - 0.965 - 0.754 - - transducin beta like 1 X-linked [Source:ZFIN;Acc:ZDB-GENE-070209-131]
35. rhogd ENSDARG00000030608, ENSDARG00000112157 599 1.714 - 0.757 - - - - - - 0.957 ras homolog gene family, member Gd [Source:ZFIN;Acc:ZDB-GENE-040426-1504]
36. UNKL ENSDARG00000037838 1086 1.711 - - - - 0.934 0.777 - - - unkempt family zinc finger-like [Source:ZFIN;Acc:ZDB-GENE-131120-196]
37. rhogc ENSDARG00000028401 2671 1.711 - - - 0.757 0.954 - - - - ras homolog gene family, member Gc [Source:ZFIN;Acc:ZDB-GENE-030131-3402]
38. TRIO TRIO 1601 1.709 - - 0.741 - - - - - 0.968
39. gatad2ab ENSDARG00000006192 2461 1.709 - - - 0.735 0.974 - - - - GATA zinc finger domain containing 2Ab [Source:ZFIN;Acc:ZDB-GENE-040426-2372]
40. srpk1b ENSDARG00000031560 2079 1.709 - - - - 0.966 0.743 - - - SRSF protein kinase 1b [Source:ZFIN;Acc:ZDB-GENE-070112-2292]
41. dopey1 438 1.707 - - - - 0.964 0.743 - - - dopey family member 1, transcript variant X4
42. usp36 ENSDARG00000032327 1884 1.706 - 0.743 - - 0.963 - - - - ubiquitin specific peptidase 36 [Source:ZFIN;Acc:ZDB-GENE-030131-5450]
43. ube2e2 ENSDARG00000034670 5918 1.702 - - - 0.845 0.857 - - - - ubiquitin-conjugating enzyme E2E 2 [Source:ZFIN;Acc:ZDB-GENE-040801-237]
44. marcksa ENSDARG00000004049 2518 1.701 - - - 0.766 0.935 - - - - myristoylated alanine-rich protein kinase C substrate a [Source:ZFIN;Acc:ZDB-GENE-050522-145]
45. kif22 ENSDARG00000102624 3694 1.701 - 0.750 - - 0.951 - - - - kinesin family member 22 [Source:ZFIN;Acc:ZDB-GENE-080204-34]
46. ddx1 ENSDARG00000032117 1295 1.699 0.744 - - - 0.955 - - - - DEAD (Asp-Glu-Ala-Asp) box helicase 1 [Source:ZFIN;Acc:ZDB-GENE-041001-215]
47. nuf2 ENSDARG00000034624 2252 1.694 - - - 0.719 0.975 - - - - NUF2, NDC80 kinetochore complex component, homolog [Source:ZFIN;Acc:ZDB-GENE-040426-1121]
48. tmem50a ENSDARG00000015757 3244 1.692 - 0.750 - - 0.942 - - - - transmembrane protein 50A [Source:ZFIN;Acc:ZDB-GENE-040426-2937]
49. C24H17orf96 C24H17orf96 1538 1.692 - - 0.730 - 0.962 - - - -
50. C9H2orf47 C9H2orf47 2036 1.69 - - - - 0.970 - 0.720 - -
51. itpr3 ENSDARG00000061741, ENSDARG00000112936 707 1.69 - - - - - 0.737 - - 0.953 inositol 1,4,5-trisphosphate receptor, type 3 [Source:ZFIN;Acc:ZDB-GENE-070605-1]
52. med13b ENSDARG00000003910 1143 1.682 - - - - 0.964 0.718 - - - mediator complex subunit 13b [Source:ZFIN;Acc:ZDB-GENE-030131-3529]
53. BRK1 ENSDARG00000041974 6430 1.676 - 0.750 - - - - - - 0.926 BRICK1, SCAR/WAVE actin-nucleating complex subunit [Source:ZFIN;Acc:ZDB-GENE-040625-77]
54. hnrnpk ENSDARG00000018914 8841 1.676 - - - 0.744 - - - - 0.932 heterogeneous nuclear ribonucleoprotein K [Source:ZFIN;Acc:ZDB-GENE-040426-1926]
55. ube2g1a ENSDARG00000015292, ENSDARG00000112281 3207 1.676 0.729 - - - 0.947 - - - - ubiquitin-conjugating enzyme E2G 1a (UBC7 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-6065]
56. ptpn23a ENSDARG00000070124 1206 1.675 - - - 0.717 - - - - 0.958 protein tyrosine phosphatase, non-receptor type 23, a [Source:ZFIN;Acc:ZDB-GENE-100921-24]
57. nxf1 ENSDARG00000055076 3251 1.673 - - - 0.715 0.958 - - - - nuclear RNA export factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2585]
58. epb41l5 ENSDARG00000032324, ENSDARG00000114579 1610 1.669 - - - - - 0.710 - - 0.959 erythrocyte membrane protein band 4.1 like 5 [Source:ZFIN;Acc:ZDB-GENE-030616-450]
59. rbm15b ENSDARG00000078966, ENSDARG00000112832 1888 1.668 - - - - 0.962 - 0.706 - - RNA binding motif protein 15B [Source:ZFIN;Acc:ZDB-GENE-080204-91]
60. G3BP2 ENSDARG00000014790 9380 1.653 - 0.712 - - 0.941 - - - - GTPase activating protein (SH3 domain) binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-070112-1972]
61. znf592 ENSDARG00000060885 776 1.649 - - - - - 0.817 0.832 - - zinc finger protein 592 [Source:ZFIN;Acc:ZDB-GENE-030131-9613]
62. hexim1 ENSDARG00000036482 4317 1.646 - - - - 0.913 - - 0.733 - hexamethylene bis-acetamide inducible 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4637]
63. nckap1 ENSDARG00000060853 3540 1.644 - - 0.713 - 0.931 - - - - NCK-associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4426]
64. fam107b ENSDARG00000026865, ENSDARG00000113209, ENSDARG00000116517 861 1.642 - - - - - - - 0.742 0.900 family with sequence similarity 107, member B [Source:ZFIN;Acc:ZDB-GENE-031030-12]
65. sas sas 1783 1.635 - 0.732 - - - 0.903 - - -
66. sf3b2 ENSDARG00000018049 4675 1.625 - - - - 0.925 0.700 - - - splicing factor 3b, subunit 2 [Source:ZFIN;Acc:ZDB-GENE-070928-1]
67. fscn1a ENSDARG00000059680 3999 1.625 - 0.774 - - - 0.851 - - - fascin actin-bundling protein 1a [Source:ZFIN;Acc:ZDB-GENE-031009-1]
68. ttyh2 ENSDARG00000016934 1868 1.622 - - - - 0.885 0.737 - - - tweety family member 2 [Source:ZFIN;Acc:ZDB-GENE-040718-193]
69. ndufab1b ENSDARG00000014915 12796 1.615 - - - - 0.730 - - - 0.885 NADH:ubiquinone oxidoreductase subunit AB1b [Source:ZFIN;Acc:ZDB-GENE-030131-4437]
70. dr1 ENSDARG00000105098, ENSDARG00000113528 5263 1.614 - 0.725 - - 0.889 - - - - down-regulator of transcription 1 [Source:ZFIN;Acc:ZDB-GENE-061013-797]
71. CABZ01085888.1 CABZ01085888.1 868 1.612 - 0.802 - 0.810 - - - - -
72. pygo2 ENSDARG00000036772 2510 1.611 - - - - 0.889 - - 0.722 - pygopus homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-050809-108]
73. snapc5 ENSDARG00000062476 1024 1.607 - 0.805 - - - - 0.802 - - small nuclear RNA activating complex, polypeptide 5 [Source:ZFIN;Acc:ZDB-GENE-041111-50]
74. zc4h2 ENSDARG00000015314, ENSDARG00000112180 5141 1.606 - - - - - - - 0.724 0.882 zinc finger, C4H2 domain containing [Source:ZFIN;Acc:ZDB-GENE-030131-2207]
75. tspan2 tspan2 948 1.604 - 0.739 - - - 0.865 - - -
76. ptch1 ENSDARG00000016404, ENSDARG00000095859, ENSDARG00000116142 1113 1.602 - - - 0.767 - - - - 0.835 patched 1 [Source:ZFIN;Acc:ZDB-GENE-980526-196]
77. srsf2b ENSDARG00000103893 1437 1.597 - 0.856 - - - - - 0.741 - serine/arginine-rich splicing factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-2420]
78. zgc:171775 ENSDARG00000058381, ENSDARG00000114470 5760 1.597 - 0.716 - - - - - - 0.881 zgc:171775 [Source:ZFIN;Acc:ZDB-GENE-030131-4309]
79. tm9sf2 ENSDARG00000003866, ENSDARG00000115213 3888 1.592 - 0.711 - - - - - - 0.881 transmembrane 9 superfamily member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6302]
80. dhx9 ENSDARG00000079725 1241 1.587 - - - 0.830 - - - 0.757 - DEAH (Asp-Glu-Ala-His) box helicase 9 [Source:ZFIN;Acc:ZDB-GENE-070912-171]
81. actr10 ENSDARG00000038432 1598 1.585 - - - 0.745 - 0.840 - - - ARP10 actin related protein 10 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-768]
82. ppp1caa ENSDARG00000003486, ENSDARG00000115977 5931 1.582 - - 0.773 - - - 0.809 - - protein phosphatase 1, catalytic subunit, alpha isozyme a [Source:ZFIN;Acc:ZDB-GENE-040516-3]
83. si:ch211-282j22.3 ENSDARG00000010524 1007 1.579 - - - 0.794 - - 0.785 - - si:ch211-282j22.3 [Source:ZFIN;Acc:ZDB-GENE-091113-49]
84. ergic1 ENSDARG00000100047 814 1.565 - 0.797 - - - 0.768 - - - endoplasmic reticulum-golgi intermediate compartment 1 [Source:ZFIN;Acc:ZDB-GENE-050913-75]
85. cdk9 ENSDARG00000044811, ENSDARG00000111590 2524 1.564 - - - - - - 0.722 - 0.842 cyclin-dependent kinase 9 (CDC2-related kinase) [Source:ZFIN;Acc:ZDB-GENE-030131-321]
86. ginm1 ENSDARG00000021975 1393 1.556 - 0.769 - - - 0.787 - - - glycoprotein integral membrane 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5900]
87. rangap1a ENSDARG00000041317 1456 1.555 - 0.784 - - - 0.771 - - - RAN GTPase activating protein 1a [Source:ZFIN;Acc:ZDB-GENE-060929-492]
88. cnot11 ENSDARG00000068596 829 1.553 - - - 0.847 - 0.706 - - - CCR4-NOT transcription complex, subunit 11 [Source:ZFIN;Acc:ZDB-GENE-030131-8068]
89. boc ENSDARG00000074335 4832 1.552 - - - 0.758 - - - - 0.794 BOC cell adhesion associated, oncogene regulated [Source:ZFIN;Acc:ZDB-GENE-030131-6560]
90. C8H1orf106 C8H1orf106 2690 1.549 - - 0.734 0.815 - - - - -
91. sgce ENSDARG00000012138 912 1.545 - - - 0.794 - - - 0.751 - sarcoglycan, epsilon [Source:ZFIN;Acc:ZDB-GENE-030724-1]
92. pom121 ENSDARG00000055113 1063 1.544 - - - 0.704 - 0.840 - - - POM121 transmembrane nucleoporin [Source:ZFIN;Acc:ZDB-GENE-030131-6557]
93. crk ENSDARG00000055635, ENSDARG00000109497, ENSDARG00000115801 5105 1.544 - - - 0.811 - - - 0.733 - v-crk avian sarcoma virus CT10 oncogene homolog [Source:ZFIN;Acc:ZDB-GENE-040801-148]
94. arhgef9b ENSDARG00000078624, ENSDARG00000110276 595 1.543 - - - - - 0.809 0.734 - - Cdc42 guanine nucleotide exchange factor (GEF) 9b [Source:ZFIN;Acc:ZDB-GENE-030131-7745]
95. atp6ap1a ENSDARG00000041417 898 1.542 - - - 0.812 - 0.730 - - - ATPase H+ transporting accessory protein 1a [Source:ZFIN;Acc:ZDB-GENE-090312-136]
96. WDR89 ENSDARG00000077265 322 1.539 - - - 0.753 - - 0.786 - - WD repeat domain 89 [Source:ZFIN;Acc:ZDB-GENE-090319-3]
97. cox16 ENSDARG00000039136 1066 1.539 - - - 0.743 - 0.796 - - - cytochrome c oxidase assembly factor COX16 [Source:ZFIN;Acc:ZDB-GENE-050417-60]
98. taf1 ENSDARG00000035330 912 1.538 - - - 0.786 - - 0.752 - - TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-030131-5576]
99. MAPT MAPT 4680 1.537 - - - - 0.837 0.700 - - -
100. suv39h1b ENSDARG00000055753 1540 1.537 - - - 0.801 - - - 0.736 - suppressor of variegation 3-9 homolog 1b [Source:ZFIN;Acc:ZDB-GENE-030131-5105]

There are 1850 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA