Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for echs1

Gene Name Gene ID Reads Annotation
echs1 ENSDARG00000001578 3733 enoyl CoA hydratase, short chain, 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-030616-617]










Genes with expression patterns similar to echs1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. echs1 ENSDARG00000001578 3733 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 enoyl CoA hydratase, short chain, 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-030616-617]
2. cox6b2 ENSDARG00000037860 33134 3.278 - - - - 0.776 0.802 0.761 - 0.939 cytochrome c oxidase subunit 6B2 [Source:ZFIN;Acc:ZDB-GENE-040426-1566]
3. c1galt1b ENSDARG00000055561, ENSDARG00000113870 1795 1.847 - 0.864 - - - - - - 0.983 core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1b [Source:ZFIN;Acc:ZDB-GENE-030131-9075]
4. rac1 rac1 7341 1.767 - - - - - - 0.790 - 0.977
5. add1 ENSDARG00000103962 4938 1.742 - - - - - 0.751 - - 0.991 adducin 1 (alpha) [Source:ZFIN;Acc:ZDB-GENE-030909-2]
6. snrpb ENSDARG00000011125 11729 1.677 - - - - - 0.701 - - 0.976 small nuclear ribonucleoprotein polypeptides B and B1 [Source:ZFIN;Acc:ZDB-GENE-040426-1819]
7. slc25a5 ENSDARG00000092553 626 1.665 - 0.906 - - - - 0.759 - - solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 5 [Source:ZFIN;Acc:ZDB-GENE-020419-9]
8. rps26 ENSDARG00000037071 40061 1.626 - - - - - 0.746 - - 0.880 ribosomal protein S26 [Source:ZFIN;Acc:ZDB-GENE-030131-8606]
9. acap3a ENSDARG00000075990 9652 1.615 - - 0.913 - - - 0.702 - - ArfGAP with coiled-coil, ankyrin repeat and PH domains 3a [Source:ZFIN;Acc:ZDB-GENE-030131-1711]
10. si:ch211-198b3.1 si:ch211-198b3.1 765 1.603 - 0.897 - - - 0.706 - - -
11. si:ch211-149b19.3 ENSDARG00000076011 306 1.594 - 0.860 - - - - 0.734 - - si:ch211-149b19.3 [Source:ZFIN;Acc:ZDB-GENE-110411-37]
12. eif3m ENSDARG00000013931 8117 1.593 - - 0.891 - - - 0.702 - - eukaryotic translation initiation factor 3, subunit M [Source:ZFIN;Acc:ZDB-GENE-040426-2643]
13. cdk16 ENSDARG00000032072 1993 1.589 - 0.785 - - - - 0.804 - - cyclin-dependent kinase 16 [Source:ZFIN;Acc:ZDB-GENE-030131-2939]
14. ywhae2 ENSDARG00000017014 5105 1.578 - 0.847 - - - 0.731 - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-050306-44]
15. nbr1 nbr1 1161 1.574 - 0.844 - - - - 0.730 - -
16. arhgap11a ENSDARG00000100019 1642 1.547 - 0.836 - - 0.711 - - - - Rho GTPase activating protein 11A [Source:ZFIN;Acc:ZDB-GENE-040426-2562]
17. sf3b3_1 ENSDARG00000103553 1191 1.529 - 0.820 - - 0.709 - - - - splicing factor 3b, subunit 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2901]
18. nsfl1c ENSDARG00000087640 2226 1.528 - 0.825 - - 0.703 - - - - NSFL1 (p97) cofactor (p47) [Source:ZFIN;Acc:ZDB-GENE-041114-160]
19. eif3i ENSDARG00000017445 21149 1.521 - - - - 0.788 - 0.733 - - eukaryotic translation initiation factor 3, subunit I [Source:ZFIN;Acc:ZDB-GENE-040426-1922]
20. zgc:162944 ENSDARG00000069846, ENSDARG00000112524 3898 1.514 - 0.796 - - - - 0.718 - - zgc:162944 [Source:ZFIN;Acc:ZDB-GENE-070424-75]
21. lamtor5 ENSDARG00000090194, ENSDARG00000115255 2539 1.506 - 0.804 - - 0.702 - - - - late endosomal/lysosomal adaptor, MAPK and MTOR activator 5 [Source:ZFIN;Acc:ZDB-GENE-110411-193]
22. calub ENSDARG00000005115 1478 1.469 - 0.750 - - - - - 0.719 - calumenin b [Source:ZFIN;Acc:ZDB-GENE-040426-1251]
23. rps28 ENSDARG00000035860 34765 1.453 - - - - 0.741 - 0.712 - - ribosomal protein S28 [Source:ZFIN;Acc:ZDB-GENE-030131-2022]
24. spry4 ENSDARG00000068732 2091 1.437 - 0.733 - - 0.704 - - - - sprouty homolog 4 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-010803-2]
25. cry4 ENSDARG00000011890 980 1.429 - - - - - - 0.703 0.726 - cryptochrome circadian clock 4 [Source:ZFIN;Acc:ZDB-GENE-010426-7]
26. cox6c ENSDARG00000038577 16845 1.421 - - - - - 0.719 0.702 - - cytochrome c oxidase subunit 6C [Source:ZFIN;Acc:ZDB-GENE-040724-95]
27. mrpl1 ENSDARG00000054606, ENSDARG00000114027 1457 1.419 - 0.711 - - 0.708 - - - - mitochondrial ribosomal protein L1 [Source:ZFIN;Acc:ZDB-GENE-060526-311]
28. ttc13 ENSDARG00000063242 1360 1.416 - 0.705 - - 0.711 - - - - tetratricopeptide repeat domain 13 [Source:ZFIN;Acc:ZDB-GENE-080722-25]
29. col11a1b ENSDARG00000009014 9998 1.41 - - - - 0.704 - 0.706 - - collagen, type XI, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-070912-607]
30. msxd msxd 1750 0.999 - - - - - - - - 0.999
31. rbm39a ENSDARG00000011613 4520 0.998 - - - - - - - - 0.998 RNA binding motif protein 39a [Source:ZFIN;Acc:ZDB-GENE-040426-2852]
32. C3H16orf72 C3H16orf72 2059 0.995 - - - - - - - - 0.995
33. taok2b_1 ENSDARG00000100620 2082 0.995 - - - - - - - - 0.995 TAO kinase 2b [Source:ZFIN;Acc:ZDB-GENE-110603-3]
34. znf410 ENSDARG00000008218 1807 0.995 - - - - - - - - 0.995 zinc finger protein 410 [Source:ZFIN;Acc:ZDB-GENE-040426-1817]
35. rnd1 rnd1 1086 0.995 - - - - - - - - 0.995
36. fbxo18 ENSDARG00000062983, ENSDARG00000113423 1458 0.995 - - - - - - - - 0.995 F-box protein helicase 1 [Source:ZFIN;Acc:ZDB-GENE-041210-99]
37. smad4 smad4 2519 0.995 - - - - - - - - 0.995
38. gnl3l ENSDARG00000020595, ENSDARG00000109309 3582 0.995 - - - - - - - - 0.995 guanine nucleotide binding protein-like 3 (nucleolar)-like [Source:ZFIN;Acc:ZDB-GENE-040723-1]
39. iars2 ENSDARG00000044134 1990 0.995 - - - - - - - - 0.995 isoleucyl-tRNA synthetase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-030616-608]
40. tulp4 tulp4 1520 0.995 - - - - - - - - 0.995
41. oxnad1 ENSDARG00000062664 2684 0.995 - - - - - - - - 0.995 oxidoreductase NAD-binding domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060503-199]
42. haus1 ENSDARG00000058968 1336 0.995 - - - - - - - - 0.995 HAUS augmin-like complex, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-091204-387]
43. chodl ENSDARG00000034528, ENSDARG00000109583, ENSDARG00000111154 1306 0.995 - - - - - - - - 0.995 chondrolectin [Source:ZFIN;Acc:ZDB-GENE-050417-36]
44. FAM210B ENSDARG00000052638 1755 0.995 - - - - - - - - 0.995 family with sequence similarity 210, member B [Source:ZFIN;Acc:ZDB-GENE-050913-122]
45. rbm24b ENSDARG00000031809, ENSDARG00000110167 2404 0.995 - - - - - - - - 0.995 RNA binding motif protein 24b [Source:ZFIN;Acc:ZDB-GENE-060312-43]
46. KCNAB1 KCNAB1 918 0.995 - - - - - - - - 0.995
47. sfi1 ENSDARG00000053992 1075 0.995 - - - - - - - - 0.995 SFI1 centrin binding protein [Source:ZFIN;Acc:ZDB-GENE-080206-4]
48. CCDC150 CCDC150 991 0.995 - - - - - - - - 0.995
49. glrx3 ENSDARG00000098785 4138 0.994 - - - - - - - - 0.994 glutaredoxin 3 [Source:ZFIN;Acc:ZDB-GENE-041010-22]
50. rab14 ENSDARG00000074246 4084 0.993 - - - - - - - - 0.993 RAB14, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-030826-20]
51. gabarapa ENSDARG00000035557, ENSDARG00000110690 6723 0.993 - - - - - - - - 0.993 GABA(A) receptor-associated protein a [Source:ZFIN;Acc:ZDB-GENE-030131-5174]
52. fbxw11a ENSDARG00000104806 1815 0.993 - - - - - - - - 0.993 F-box and WD repeat domain containing 11a [Source:ZFIN;Acc:ZDB-GENE-030131-6305]
53. rhag ENSDARG00000019253 2974 0.993 - - - - - - - - 0.993 Rh associated glycoprotein [Source:ZFIN;Acc:ZDB-GENE-030131-8229]
54. HMGXB4_1 HMGXB4_1 1122 0.993 - - - - - - - - 0.993
55. ube2a ENSDARG00000098466 12765 0.993 - - - - - - - - 0.993 ubiquitin-conjugating enzyme E2A (RAD6 homolog) [Source:ZFIN;Acc:ZDB-GENE-030616-72]
56. stat5.1 stat5.1 3337 0.992 - - - - - - - - 0.992
57. pex19 ENSDARG00000004891 2317 0.992 - - - - 0.992 - - - - peroxisomal biogenesis factor 19 [Source:ZFIN;Acc:ZDB-GENE-050417-424]
58. zmiz1a ENSDARG00000074502 3920 0.991 - - - - - - - - 0.991 zinc finger, MIZ-type containing 1a [Source:ZFIN;Acc:ZDB-GENE-080220-27]
59. ndufa7 ENSDARG00000036684 6051 0.99 - - - - - - - - 0.990 NADH:ubiquinone oxidoreductase subunit A7 [Source:ZFIN;Acc:ZDB-GENE-040801-169]
60. atp1b1b ENSDARG00000076833 10324 0.99 - - - - - - - - 0.990 ATPase Na+/K+ transporting subunit beta 1b [Source:ZFIN;Acc:ZDB-GENE-001127-4]
61. si:ch211-152c2.3 ENSDARG00000045898 3448 0.989 - - - - - - - - 0.989 si:ch211-152c2.3 [Source:ZFIN;Acc:ZDB-GENE-030131-9914]
62. blcap ENSDARG00000052073 8646 0.988 - - - - - - - - 0.988 bladder cancer associated protein [Source:ZFIN;Acc:ZDB-GENE-000330-7]
63. tmem47 ENSDARG00000057322 4691 0.987 - - - - 0.987 - - - - transmembrane protein 47 [Source:ZFIN;Acc:ZDB-GENE-040426-2644]
64. SSBP4 ENSDARG00000056483 5156 0.986 - - - - - - - - 0.986 single stranded DNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-469]
65. alas2 ENSDARG00000038643, ENSDARG00000113125 4935 0.984 - - - - - - - - 0.984 aminolevulinate, delta-, synthase 2 [Source:ZFIN;Acc:ZDB-GENE-001229-1]
66. prkab1b ENSDARG00000046143 8640 0.983 - - - - - - - - 0.983 protein kinase, AMP-activated, beta 1 non-catalytic subunit, b [Source:ZFIN;Acc:ZDB-GENE-030131-7172]
67. alcamb ENSDARG00000058538 5672 0.982 - - - - 0.982 - - - - activated leukocyte cell adhesion molecule b [Source:ZFIN;Acc:ZDB-GENE-030131-1768]
68. lgals1l1 ENSDARG00000088711 4515 0.981 - - - - - - - - 0.981 lectin, galactoside-binding, soluble, 1 (galectin 1)-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4905]
69. arhgef12b ENSDARG00000100913 1358 0.979 - - - - - - - - 0.979 Rho guanine nucleotide exchange factor (GEF) 12b [Source:ZFIN;Acc:ZDB-GENE-070705-36]
70. sf3a3 ENSDARG00000100114 4511 0.978 - - - - - - - - 0.978 splicing factor 3a, subunit 3 [Source:ZFIN;Acc:ZDB-GENE-040908-1]
71. Sep-02 Sep-02 10074 0.978 - - - - - - - - 0.978
72. tuba1b ENSDARG00000045367 8485 0.977 - - - - - - - - 0.977 tubulin, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-030822-1]
73. lasp1 ENSDARG00000057867 18721 0.977 - - - - - - - - 0.977 LIM and SH3 protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1936]
74. LENG8 ENSDARG00000076805, ENSDARG00000113326 4021 0.976 - - - - - - - - 0.976 leukocyte receptor cluster (LRC) member 8 [Source:ZFIN;Acc:ZDB-GENE-070410-6]
75. gstp1 ENSDARG00000104068 12698 0.976 - - - - - - - - 0.976 glutathione S-transferase pi 1 [Source:ZFIN;Acc:ZDB-GENE-020806-4]
76. ENDOD1_5 ENDOD1_5 8723 0.973 - - - - - - - - 0.973
77. ahnak ENSDARG00000061764 25962 0.971 - - - - - - - - 0.971 AHNAK nucleoprotein [Source:ZFIN;Acc:ZDB-GENE-030131-8719]
78. clasp2 ENSDARG00000020345 3382 0.968 - - 0.968 - - - - - - cytoplasmic linker associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2343]
79. bud31 ENSDARG00000017084 3892 0.962 - - 0.962 - - - - - - BUD31 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040720-3]
80. rpl22l1 ENSDARG00000010244 36262 0.961 - - - - - - - - 0.961 ribosomal protein L22-like 1 [Source:ZFIN;Acc:ZDB-GENE-060804-3]
81. si:ch1073-286c18.5 ENSDARG00000098567 7391 0.96 - - - - - - - - 0.960 si:ch1073-286c18.5 [Source:ZFIN;Acc:ZDB-GENE-121214-240]
82. smarce1 ENSDARG00000016871 9628 0.96 - - - - - - - - 0.960 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-967]
83. kpna3 ENSDARG00000052641 5347 0.959 - - 0.959 - - - - - - karyopherin alpha 3 (importin alpha 4) [Source:ZFIN;Acc:ZDB-GENE-030616-541]
84. pak2b ENSDARG00000018476 4331 0.951 - - 0.951 - - - - - - p21 protein (Cdc42/Rac)-activated kinase 2b [Source:ZFIN;Acc:ZDB-GENE-030131-3759]
85. dcbld2 ENSDARG00000062177, ENSDARG00000112201 3795 0.95 - - 0.950 - - - - - - discoidin, CUB and LCCL domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-070112-1822]
86. pfn2l ENSDARG00000012682 21690 0.95 - - - - - - - - 0.950 profilin 2 like [Source:ZFIN;Acc:ZDB-GENE-030131-34]
87. nono ENSDARG00000020482, ENSDARG00000115783 12482 0.948 - - 0.948 - - - - - - non-POU domain containing, octamer-binding [Source:ZFIN;Acc:ZDB-GENE-030131-713]
88. fahd1 ENSDARG00000031657 521 0.943 - 0.943 - - - - - - - fumarylacetoacetate hydrolase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050522-448]
89. srpx ENSDARG00000010318 946 0.942 - 0.942 - - - - - - - sushi-repeat containing protein X-linked [Source:ZFIN;Acc:ZDB-GENE-050327-43]
90. mllt10 ENSDARG00000045401 7557 0.936 - - 0.936 - - - - - - MLLT10, histone lysine methyltransferase DOT1L cofactor [Source:ZFIN;Acc:ZDB-GENE-041114-176]
91. msna ENSDARG00000058128, ENSDARG00000114614 23727 0.936 - - - - - - - - 0.936 moesin a [Source:ZFIN;Acc:ZDB-GENE-021211-2]
92. aimp1 ENSDARG00000060036 5343 0.935 - - 0.935 - - - - - - aminoacyl tRNA synthetase complex-interacting multifunctional protein 1 [Source:ZFIN;Acc:ZDB-GENE-060825-144]
93. cstf3 ENSDARG00000018904 6111 0.935 - - 0.935 - - - - - - cleavage stimulation factor, 3' pre-RNA, subunit 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1997]
94. CABZ01092303.1 CABZ01092303.1 8825 0.934 - - - - 0.934 - - - -
95. cx43.4 ENSDARG00000007099 16369 0.934 - - - - - - - - 0.934 connexin 43.4 [Source:ZFIN;Acc:ZDB-GENE-990415-38]
96. hnrpdl 14288 0.931 - - - - - - - - 0.931 heterogeneous nuclear ribonucleoprotein D-like, transcript variant X2
97. dmrt2a ENSDARG00000015072, ENSDARG00000113160 895 0.927 - 0.927 - - - - - - - doublesex and mab-3 related transcription factor 2a [Source:ZFIN;Acc:ZDB-GENE-990621-7]
98. syne2b ENSDARG00000053484 9225 0.925 - - - - 0.925 - - - - spectrin repeat containing, nuclear envelope 2b [Source:ZFIN;Acc:ZDB-GENE-071218-5]
99. COL4A3BP COL4A3BP 3288 0.925 - 0.925 - - - - - - -
100. cdc14b ENSDARG00000021483 4958 0.924 - - 0.924 - - - - - - cell division cycle 14B [Source:ZFIN;Acc:ZDB-GENE-040426-820]

There are 842 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA