Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for ebf1a

Gene Name Gene ID Reads Annotation
ebf1a 733 early B-cell factor 1a, transcript variant X4










Genes with expression patterns similar to ebf1a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ebf1a 733 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 early B-cell factor 1a, transcript variant X4
2. parp2 ENSDARG00000079202, ENSDARG00000111737 878 2.271 0.744 - - - - 0.778 - - 0.749 poly (ADP-ribose) polymerase 2 [Source:ZFIN;Acc:ZDB-GENE-031113-6]
3. coe2 coe2 1633 2.267 - - - 0.741 - - 0.792 - 0.734
4. nhlh2 ENSDARG00000025495 1860 2.194 - - - 0.720 - 0.741 - - 0.733 nescient helix loop helix 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1809]
5. kirrel3l ENSDARG00000104665 499 2.194 0.736 - - - - 0.721 - - 0.737 kirre like nephrin family adhesion molecule 3, like [Source:ZFIN;Acc:ZDB-GENE-070831-1]
6. cyp26b1 ENSDARG00000077121 1364 2.192 - 0.701 - 0.756 - - - - 0.735 cytochrome P450, family 26, subfamily b, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2908]
7. nbeaa ENSDARG00000070080 862 2.165 - - - 0.741 - 0.723 - - 0.701 neurobeachin a [Source:ZFIN;Acc:ZDB-GENE-050320-68]
8. rbm4.1 ENSDARG00000036386 625 1.636 - - - - - 0.814 - - 0.822 RNA binding motif protein 4.1 [Source:ZFIN;Acc:ZDB-GENE-030131-3902]
9. PPP1R9B PPP1R9B 855 1.615 - 0.724 - - - 0.891 - - -
10. evx2 ENSDARG00000059255 317 1.596 - - - - - 0.814 - - 0.782 even-skipped homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-980526-215]
11. ABTB1 ENSDARG00000063354 383 1.59 0.843 - - - - - 0.747 - - ankyrin repeat and BTB (POZ) domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-141212-241]
12. CBFA2T3 ENSDARG00000079012 6799 1.586 - - - - - 0.820 0.766 - - core-binding factor, runt domain, alpha subunit 2; translocated to, 3 [Source:ZFIN;Acc:ZDB-GENE-070209-2]
13. cdk5r1b ENSDARG00000045087 2075 1.571 - - - - - 0.715 - 0.856 - cyclin-dependent kinase 5, regulatory subunit 1b (p35) [Source:ZFIN;Acc:ZDB-GENE-040718-220]
14. ANK1_1 ANK1_1 507 1.559 - - - - - 0.841 0.718 - -
15. sh3bp5lb 1090 1.556 - 0.825 - - - 0.731 - - - SH3-binding domain protein 5-like, b
16. ank2b ENSDARG00000043313 3065 1.553 - - - - - 0.706 0.847 - - ankyrin 2b, neuronal [Source:ZFIN;Acc:ZDB-GENE-041010-165]
17. si:ch211-11c15.3 si:ch211-11c15.3 1279 1.546 - - - - - - - 0.815 0.731
18. SYNDIG1 ENSDARG00000100751 165 1.535 0.761 - - - - 0.774 - - - synapse differentiation inducing 1 [Source:HGNC Symbol;Acc:HGNC:15885]
19. iffo1b ENSDARG00000062108 192 1.534 - - - - - 0.728 0.806 - - intermediate filament family orphan 1b [Source:ZFIN;Acc:ZDB-GENE-050208-308]
20. CR385063.1 CR385063.1 590 1.533 - 0.806 - - - - 0.727 - -
21. ccdc6b ENSDARG00000017595 828 1.53 - - - - - 0.781 - - 0.749 coiled-coil domain containing 6b [Source:ZFIN;Acc:ZDB-GENE-040426-869]
22. ELOVL4 ELOVL4 3026 1.529 - - - - - - - 0.760 0.769
23. zfr ENSDARG00000027109, ENSDARG00000116459 4171 1.525 0.812 - - - - - 0.713 - - zinc finger RNA binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-378]
24. gas1b ENSDARG00000067984 1748 1.521 - - - - - 0.800 0.721 - - growth arrest-specific 1b [Source:ZFIN;Acc:ZDB-GENE-050302-79]
25. klhl32 ENSDARG00000003576 99 1.521 - - - - - 0.772 0.749 - - kelch-like family member 32 [Source:ZFIN;Acc:ZDB-GENE-070209-47]
26. ache ENSDARG00000031796 1985 1.519 - - - - - 0.774 0.745 - - acetylcholinesterase [Source:ZFIN;Acc:ZDB-GENE-010906-1]
27. si:ch211-197l9.2 ENSDARG00000078244 655 1.518 - 0.816 - - - - 0.702 - - si:ch211-197l9.2 [Source:ZFIN;Acc:ZDB-GENE-091204-369]
28. ino80e ENSDARG00000022939, ENSDARG00000101892 216 1.517 - 0.770 - - - 0.747 - - - INO80 complex subunit E [Source:ZFIN;Acc:ZDB-GENE-040426-1818]
29. ccdc136b ENSDARG00000057921, ENSDARG00000075513 387 1.515 0.725 - - - - 0.790 - - - coiled-coil domain containing 136b [Source:ZFIN;Acc:ZDB-GENE-081104-244]
30. epha7 ENSDARG00000004635, ENSDARG00000112305 1373 1.509 - - - - - - 0.722 - 0.787 eph receptor A7 [Source:ZFIN;Acc:ZDB-GENE-030131-3745]
31. clstn1 ENSDARG00000031720 5286 1.508 - - - 0.724 - 0.784 - - - calsyntenin 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1064]
32. dpysl5b ENSDARG00000059311 600 1.506 - 0.711 - - - 0.795 - - - dihydropyrimidinase-like 5b [Source:ZFIN;Acc:ZDB-GENE-050720-4]
33. pou3f3a ENSDARG00000042032 2835 1.504 - - - - - 0.771 - - 0.733 POU class 3 homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-980526-220]
34. magi1a ENSDARG00000070145 547 1.501 - 0.729 - - - 0.772 - - - membrane associated guanylate kinase, WW and PDZ domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-081105-13]
35. zgc:77415 zgc:77415 383 1.496 0.710 0.786 - - - - - - -
36. dpysl3 ENSDARG00000002587 4381 1.496 - - - - - 0.743 - - 0.753 dihydropyrimidinase-like 3 [Source:ZFIN;Acc:ZDB-GENE-050720-2]
37. LPHN2 LPHN2 1971 1.492 - - - - - - - 0.748 0.744
38. ubac1 ENSDARG00000059722, ENSDARG00000113910 1375 1.486 - 0.716 - - - - 0.770 - - UBA domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9372]
39. cd248b ENSDARG00000077938 2561 1.484 - 0.761 - - - - 0.723 - - CD248 molecule, endosialin b [Source:ZFIN;Acc:ZDB-GENE-050309-46]
40. smek1 ENSDARG00000042187 3509 1.483 - - - - - - - 0.765 0.718 SMEK homolog 1, suppressor of mek1 (Dictyostelium) [Source:ZFIN;Acc:ZDB-GENE-030131-3958]
41. fam217b ENSDARG00000088505 104 1.48 0.704 - - - - - - - 0.776 family with sequence similarity 217, member B [Source:ZFIN;Acc:ZDB-GENE-090313-236]
42. amer2 ENSDARG00000075222 594 1.48 - - - 0.706 - 0.774 - - - APC membrane recruitment protein 2 [Source:ZFIN;Acc:ZDB-GENE-070719-5]
43. FAM53C FAM53C 769 1.478 - 0.744 - - - - 0.734 - -
44. gcfc2 ENSDARG00000079020 479 1.477 0.740 - - - - 0.737 - - - GC-rich sequence DNA-binding factor 2 [Source:ZFIN;Acc:ZDB-GENE-080204-19]
45. KLF16 KLF16 3773 1.47 - - - - - 0.712 - 0.758 -
46. tal1 ENSDARG00000019930 523 1.468 - 0.742 - - - 0.726 - - - T-cell acute lymphocytic leukemia 1 [Source:ZFIN;Acc:ZDB-GENE-980526-501]
47. pou6f2 ENSDARG00000086362 135 1.467 - - - - - - - 0.757 0.710 POU class 6 homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-091118-71]
48. hoxa9a ENSDARG00000105013 1509 1.466 0.735 0.731 - - - - - - - homeobox A9a [Source:ZFIN;Acc:ZDB-GENE-000823-1]
49. fxr1 ENSDARG00000022968 2831 1.465 - - - - - 0.732 0.733 - - fragile X mental retardation, autosomal homolog 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5431]
50. penka ENSDARG00000004869 161 1.463 - - - - - 0.747 0.716 - - proenkephalin a [Source:ZFIN;Acc:ZDB-GENE-030729-31]
51. CASKIN1 ENSDARG00000046107 201 1.46 - - - - - 0.718 0.742 - - CASK interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-071115-3]
52. eya1 ENSDARG00000014259, ENSDARG00000116267 5111 1.457 0.715 - - - - - 0.742 - - EYA transcriptional coactivator and phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-990712-18]
53. smarca5 ENSDARG00000052348 15433 1.456 - - - - - 0.722 - - 0.734 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 [Source:ZFIN;Acc:ZDB-GENE-021125-1]
54. CYTH2 ENSDARG00000028800 2349 1.454 - - - 0.720 - - - - 0.734 cytohesin 2 [Source:HGNC Symbol;Acc:HGNC:9502]
55. syt11b ENSDARG00000056105 578 1.453 - - - - - 0.745 - - 0.708 synaptotagmin XIb [Source:ZFIN;Acc:ZDB-GENE-090601-7]
56. znf292a ENSDARG00000016763 2253 1.451 - - - - - - 0.714 - 0.737 zinc finger protein 292a [Source:ZFIN;Acc:ZDB-GENE-071004-18]
57. PAOX PAOX 251 1.45 - - - - - 0.711 0.739 - -
58. CR749741.2 CR749741.2 15 1.45 0.703 - - - - 0.747 - - -
59. gdf11 ENSDARG00000044924 534 1.448 - - - - - 0.745 - - 0.703 growth differentiation factor 11 [Source:ZFIN;Acc:ZDB-GENE-040427-2]
60. foxk2 ENSDARG00000030583 2982 1.446 - - - - - - 0.715 - 0.731 forkhead box K2 [Source:ZFIN;Acc:ZDB-GENE-030131-2861]
61. epha4b ENSDARG00000011600 3110 1.445 - - - - - 0.734 - - 0.711 eph receptor A4b [Source:ZFIN;Acc:ZDB-GENE-030826-6]
62. PCDH9 ENSDARG00000063264 1309 1.443 - - - - - - - 0.701 0.742 protocadherin 9 [Source:ZFIN;Acc:ZDB-GENE-091015-1]
63. MYOM1 MYOM1 3870 1.437 - 0.713 - - - - 0.724 - -
64. si:ch1073-181h11.4 ENSDARG00000098347 86 1.437 - 0.735 - - - - 0.702 - - si:ch1073-181h11.4 [Source:ZFIN;Acc:ZDB-GENE-091204-426]
65. sptb ENSDARG00000030490 7128 1.436 - 0.728 - - - - 0.708 - - spectrin, beta, erythrocytic [Source:ZFIN;Acc:ZDB-GENE-000906-1]
66. CABZ01111990.1 CABZ01111990.1 4374 1.435 - 0.721 - - - 0.714 - - -
67. fitm1 ENSDARG00000056464 1759 1.428 - 0.701 - - - - 0.727 - - fat storage-inducing transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-050306-28]
68. pou3f2a ENSDARG00000070220 817 1.428 - - - - - 0.726 - - 0.702 POU class 3 homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-980526-139]
69. sh2d3ca ENSDARG00000028099 1037 1.426 - - - - - - - 0.700 0.726 SH2 domain containing 3Ca [Source:ZFIN;Acc:ZDB-GENE-080102-1]
70. fzd8b ENSDARG00000038569, ENSDARG00000110687 52 1.418 - - - - - 0.704 - - 0.714 frizzled class receptor 8b [Source:ZFIN;Acc:ZDB-GENE-000328-4]
71. si:dkey-65j6.2 ENSDARG00000103586 533 1.416 - 0.709 - - - - 0.707 - - si:dkey-65j6.2 [Source:ZFIN;Acc:ZDB-GENE-090313-319]
72. tmem41ab ENSDARG00000026771, ENSDARG00000114061, ENSDARG00000116237 641 1.412 - 0.706 - - - - 0.706 - - transmembrane protein 41ab [Source:ZFIN;Acc:ZDB-GENE-040426-2050]
73. cbfb ENSDARG00000040917 1422 1.409 - - 0.708 - - - - - 0.701 core-binding factor, beta subunit [Source:ZFIN;Acc:ZDB-GENE-980526-440]
74. trim44 ENSDARG00000051761 509 0.924 - - - - - - 0.924 - - tripartite motif containing 44 [Source:ZFIN;Acc:ZDB-GENE-050522-37]
75. AGAP1 ENSDARG00000062123, ENSDARG00000113863 2842 0.898 0.898 - - - - - - - - ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 [Source:ZFIN;Acc:ZDB-GENE-130405-1]
76. zufsp ENSDARG00000059983 261 0.883 - - - - - 0.883 - - - zinc finger containing ubiquitin peptidase 1 [Source:ZFIN;Acc:ZDB-GENE-070209-211]
77. myct1 myct1 217 0.879 - 0.879 - - - - - - -
78. nol9 ENSDARG00000077751 2471 0.874 - - - - - - - 0.874 - nucleolar protein 9 [Source:ZFIN;Acc:ZDB-GENE-070629-1]
79. asb2b ENSDARG00000102490 311 0.868 - - - - - - 0.868 - - ankyrin repeat and SOCS box containing 2b [Source:ZFIN;Acc:ZDB-GENE-040426-20]
80. ITGB1BP2 ENSDARG00000030176 2472 0.862 - - - - - - 0.862 - - integrin subunit beta 1 binding protein 2 [Source:HGNC Symbol;Acc:HGNC:6154]
81. METTL18 ENSDARG00000074588 918 0.858 - 0.858 - - - - - - - methyltransferase like 18 [Source:HGNC Symbol;Acc:HGNC:28793]
82. foxc1b ENSDARG00000055398 1499 0.856 0.856 - - - - - - - - forkhead box C1b [Source:ZFIN;Acc:ZDB-GENE-010302-2]
83. NPBWR2 NPBWR2 132 0.856 - - - - - 0.856 - - -
84. armc5 ENSDARG00000078083 114 0.855 - - - - - 0.855 - - - armadillo repeat containing 5 [Source:ZFIN;Acc:ZDB-GENE-030131-7382]
85. reps1 ENSDARG00000002877 962 0.854 - 0.854 - - - - - - - RALBP1 associated Eps domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9536]
86. trim109 ENSDARG00000062429 321 0.854 - - - - - 0.854 - - - tripartite motif containing 109 [Source:ZFIN;Acc:ZDB-GENE-060616-101]
87. C17H15orf52 244 0.852 - - - - - - 0.852 - - chromosome 17 C15orf52 homolog, transcript variant X3
88. nrcam nrcam 397 0.851 0.851 - - - - - - - -
89. C20H1orf112 C20H1orf112 316 0.85 - - - - - - 0.850 - -
90. nudt1 ENSDARG00000030573 268 0.848 - - - - - 0.848 - - - nudix (nucleoside diphosphate linked moiety X)-type motif 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2757]
91. sh3tc2 ENSDARG00000089917 415 0.846 - 0.846 - - - - - - - SH3 domain and tetratricopeptide repeats 2 [Source:ZFIN;Acc:ZDB-GENE-081104-347]
92. sirt3 ENSDARG00000035819 101 0.845 - 0.845 - - - - - - - sirtuin 3 [Source:ZFIN;Acc:ZDB-GENE-070112-1762]
93. uqcrb ENSDARG00000011146 183 0.845 - - - - - - 0.845 - - ubiquinol-cytochrome c reductase binding protein [Source:ZFIN;Acc:ZDB-GENE-050522-542]
94. snrnp48 ENSDARG00000039989, ENSDARG00000112516 237 0.841 0.841 - - - - - - - - small nuclear ribonucleoprotein 48 (U11/U12) [Source:ZFIN;Acc:ZDB-GENE-030131-4482]
95. col19a1 ENSDARG00000076163, ENSDARG00000096073 356 0.841 - - - - - - 0.841 - - collagen, type XIX, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-090312-196]
96. IGFALS ENSDARG00000037836 133 0.839 0.839 - - - - - - - - insulin-like growth factor binding protein, acid labile subunit [Source:ZFIN;Acc:ZDB-GENE-061009-25]
97. arvcfb ENSDARG00000061688 2388 0.838 - - - - - - 0.838 - - ARVCF, delta catenin family member b [Source:ZFIN;Acc:ZDB-GENE-060526-60]
98. CAMKK2 CAMKK2 184 0.837 - - - - - 0.837 - - -
99. smurf2 ENSDARG00000038067 2057 0.837 0.837 - - - - - - - - SMAD specific E3 ubiquitin protein ligase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1830]
100. synpo2b ENSDARG00000077157 1009 0.837 - - - - - - 0.837 - - synaptopodin 2b [Source:ZFIN;Acc:ZDB-GENE-101230-1]

There are 1281 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA