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Results for dre-mir-222a

Gene Name Gene ID Reads Annotation
dre-mir-222a ENSDARG00000090347 131 dre-mir-222a [Source:miRBase;Acc:MI0001388]










Genes with expression patterns similar to dre-mir-222a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. dre-mir-222a ENSDARG00000090347 131 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 dre-mir-222a [Source:miRBase;Acc:MI0001388]
2. PARP4 ENSDARG00000069934 70 2.26 - 0.746 - - 0.727 - - 0.787 - poly (ADP-ribose) polymerase family, member 4 [Source:ZFIN;Acc:ZDB-GENE-070912-387]
3. rhbdl1 ENSDARG00000087040 23 1.659 - - 0.807 - - - 0.852 - - rhomboid, veinlet-like 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-120529-2]
4. vhl ENSDARG00000070617 663 1.642 - 0.942 - - - - 0.700 - - von Hippel-Lindau tumor suppressor [Source:ZFIN;Acc:ZDB-GENE-070112-1042]
5. zgc:173548 ENSDARG00000070048 558 1.619 - 0.823 - - - - 0.796 - - zgc:173548 [Source:ZFIN;Acc:ZDB-GENE-070928-39]
6. nle1 ENSDARG00000057105 522 1.57 - 0.850 - - - - 0.720 - - notchless homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-050522-321]
7. COL27A1 COL27A1 94 1.565 - - - - - 0.712 0.853 - -
8. nphp3 ENSDARG00000078261 110 1.562 - - 0.765 - - - - 0.797 - nephronophthisis 3 [Source:ZFIN;Acc:ZDB-GENE-091204-117]
9. vti1b ENSDARG00000039270 295 1.559 - 0.794 - - - - 0.765 - - vesicle transport through interaction with t-SNAREs 1B [Source:ZFIN;Acc:ZDB-GENE-040426-1148]
10. CABZ01083834.1 CABZ01083834.1 38 1.533 - - - - - - 0.722 0.811 -
11. si:dkeyp-110g5.4 ENSDARG00000092482 249 1.514 - 0.810 - - - - - 0.704 - si:dkeyp-110g5.4 [Source:ZFIN;Acc:ZDB-GENE-081104-452]
12. cyth3 cyth3 120 1.506 0.702 - - - - - 0.804 - -
13. mfsd6a ENSDARG00000032318 228 1.469 - 0.759 - - - - - 0.710 - major facilitator superfamily domain containing 6a [Source:ZFIN;Acc:ZDB-GENE-050208-335]
14. zgc:110843 ENSDARG00000073845 940 1.437 - 0.727 - - - 0.710 - - - zgc:110843 [Source:ZFIN;Acc:ZDB-GENE-050327-15]
15. CR354432.1 CR354432.1 424 0.982 - 0.982 - - - - - - -
16. CU855953.1 CU855953.1 137 0.982 - 0.982 - - - - - - -
17. rdh8a ENSDARG00000028048 334 0.98 - 0.980 - - - - - - - retinol dehydrogenase 8a [Source:ZFIN;Acc:ZDB-GENE-021115-3]
18. mettl6 ENSDARG00000070085 366 0.978 - 0.978 - - - - - - - methyltransferase like 6 [Source:ZFIN;Acc:ZDB-GENE-040426-926]
19. sdk1a ENSDARG00000078866 159 0.978 - 0.978 - - - - - - - sidekick cell adhesion molecule 1a [Source:ZFIN;Acc:ZDB-GENE-081104-374]
20. si:ch211-255g12.8 ENSDARG00000069627 22 0.977 - 0.977 - - - - - - - si:ch211-255g12.8 [Source:ZFIN;Acc:ZDB-GENE-081104-39]
21. TC2N ENSDARG00000095067 146 0.977 - 0.977 - - - - - - - tandem C2 domains, nuclear [Source:HGNC Symbol;Acc:HGNC:19859]
22. si:ch211-236p5.2 ENSDARG00000086256 8 0.977 - 0.977 - - - - - - - si:ch211-236p5.2 [Source:ZFIN;Acc:ZDB-GENE-081028-33]
23. zgc:112234_2 ENSDARG00000099514, ENSDARG00000102806, ENSDARG00000104588, ENSDARG00000105340, ENSDARG00000105393, ENSDARG00000105414, ENSDARG00000105468, ENSDARG00000105483, ENSDARG00000105507, ENSDARG00000111934 33 0.976 - 0.976 - - - - - - - zgc:112234 [Source:NCBI gene;Acc:554097]
24. dio2 ENSDARG00000094857 17 0.976 - 0.976 - - - - - - - iodothyronine deiodinase 2 [Source:ZFIN;Acc:ZDB-GENE-030327-4]
25. BX004816.4 BX004816.4 33 0.976 - 0.976 - - - - - - -
26. grip2b ENSDARG00000027618 9 0.976 - 0.976 - - - - - - - glutamate receptor interacting protein 2b [Source:ZFIN;Acc:ZDB-GENE-070705-172]
27. SNORA53 SNORA53 10 0.976 - 0.976 - - - - - - -
28. C17H2orf43 C17H2orf43 379 0.976 - 0.976 - - - - - - -
29. slc43a3b ENSDARG00000057949 194 0.976 - 0.976 - - - - - - - solute carrier family 43, member 3b [Source:ZFIN;Acc:ZDB-GENE-060312-28]
30. dpt ENSDARG00000056178 7 0.976 - 0.976 - - - - - - - dermatopontin [Source:ZFIN;Acc:ZDB-GENE-060312-9]
31. tirap ENSDARG00000074371 10 0.976 - 0.976 - - - - - - - toll-interleukin 1 receptor (TIR) domain containing adaptor protein [Source:ZFIN;Acc:ZDB-GENE-040219-4]
32. zgc:92326 zgc:92326 94 0.976 - 0.976 - - - - - - -
33. tmprss13a ENSDARG00000100969 84 0.976 - 0.976 - - - - - - - transmembrane serine protease 13a [Source:ZFIN;Acc:ZDB-GENE-090309-3]
34. GPR97 GPR97 9 0.976 - 0.976 - - - - - - -
35. si:dkey-192i18.3 si:dkey-192i18.3 47 0.976 - 0.976 - - - - - - -
36. si:ch211-284e13.4 ENSDARG00000060330 6 0.976 - 0.976 - - - - - - - si:ch211-284e13.4 [Source:ZFIN;Acc:ZDB-GENE-060526-161]
37. CABZ01081656.1 CABZ01081656.1 14 0.976 - 0.976 - - - - - - -
38. si:dkey-173l11.3 si:dkey-173l11.3 14 0.976 - 0.976 - - - - - - -
39. klhdc8b ENSDARG00000090787 33 0.976 - 0.976 - - - - - - - kelch domain containing 8B [Source:ZFIN;Acc:ZDB-GENE-090313-174]
40. zgc:112966_1 ENSDARG00000095369, ENSDARG00000099057, ENSDARG00000101612 16 0.976 - 0.976 - - - - - - - zgc:112966 [Source:ZFIN;Acc:ZDB-GENE-050320-137]
41. si:ch211-227e10.1 ENSDARG00000103197, ENSDARG00000104968 6 0.976 - 0.976 - - - - - - - si:ch211-227e10.1 [Source:ZFIN;Acc:ZDB-GENE-050420-221]
42. CU929163.1 CU929163.1 11 0.976 - 0.976 - - - - - - -
43. elavl2 ENSDARG00000040732 44 0.976 - 0.976 - - - - - - - ELAV like neuron-specific RNA binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-040704-9]
44. GFRAL ENSDARG00000089709 167 0.975 - 0.975 - - - - - - - GDNF family receptor alpha like [Source:ZFIN;Acc:ZDB-GENE-110607-2]
45. gng8 ENSDARG00000042970 117 0.974 - 0.974 - - - - - - - guanine nucleotide binding protein (G protein), gamma 8 [Source:ZFIN;Acc:ZDB-GENE-050522-312]
46. SLC22A15 ENSDARG00000055445 111 0.974 - 0.974 - - - - - - - solute carrier family 22, member 15 [Source:ZFIN;Acc:ZDB-GENE-070928-5]
47. itsn1 ENSDARG00000000086 684 0.974 - 0.974 - - - - - - - intersectin 1 (SH3 domain protein) [Source:ZFIN;Acc:ZDB-GENE-030616-226]
48. nkx2.2b ENSDARG00000101549 266 0.973 - 0.973 - - - - - - - NK2 homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-050217-3]
49. wdyhv1 ENSDARG00000070403 42 0.973 - 0.973 - - - - - - - WDYHV motif containing 1 [Source:ZFIN;Acc:ZDB-GENE-060503-848]
50. cry1b cry1b 152 0.973 - 0.973 - - - - - - -
51. si:dkeyp-52c3.2 ENSDARG00000070516 92 0.972 - 0.972 - - - - - - - si:dkeyp-52c3.2 [Source:ZFIN;Acc:ZDB-GENE-110411-46]
52. zgc:171779 ENSDARG00000016908 26 0.971 - 0.971 - - - - - - - zgc:171779 [Source:ZFIN;Acc:ZDB-GENE-071004-38]
53. samd10a ENSDARG00000079978, ENSDARG00000112138 430 0.971 - 0.971 - - - - - - - sterile alpha motif domain containing 10a [Source:ZFIN;Acc:ZDB-GENE-080204-53]
54. stk38l ENSDARG00000045482 266 0.97 - 0.970 - - - - - - - serine/threonine kinase 38 like [Source:ZFIN;Acc:ZDB-GENE-040426-798]
55. si:ch1073-228j22.1 ENSDARG00000095799 98 0.97 - 0.970 - - - - - - - si:ch1073-228j22.1 [Source:ZFIN;Acc:ZDB-GENE-110411-219]
56. sfmbt2 ENSDARG00000045519 251 0.97 - 0.970 - - - - - - - Scm like with four mbt domains 2 [Source:ZFIN;Acc:ZDB-GENE-041210-196]
57. slc6a13l 121 0.969 - 0.969 - - - - - - - solute carrier family 6 (neurotransmitter transporter, GABA), member 13 like, transcript variant X2
58. ccl25b ENSDARG00000070873 454 0.969 - 0.969 - - - - - - - chemokine (C-C motif) ligand 25b [Source:ZFIN;Acc:ZDB-GENE-110222-2]
59. si:ch211-279m15.1 si:ch211-279m15.1 67 0.969 - 0.969 - - - - - - -
60. cdx1a ENSDARG00000114554 28 0.968 - 0.968 - - - - - - - caudal type homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-050510-1]
61. btbd9 ENSDARG00000068983 356 0.968 - 0.968 - - - - - - - BTB (POZ) domain containing 9 [Source:ZFIN;Acc:ZDB-GENE-040704-39]
62. ddrgk1_1 ENSDARG00000037172 1563 0.968 - 0.968 - - - - - - - DDRGK domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1050]
63. six3a ENSDARG00000058008, ENSDARG00000114971 586 0.967 - 0.967 - - - - - - - SIX homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-990415-127]
64. entpd2a.2 ENSDARG00000033953 389 0.965 - 0.965 - - - - - - - ectonucleoside triphosphate diphosphohydrolase 2a, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-040724-67]
65. plekha7a ENSDARG00000060813 179 0.965 - 0.965 - - - - - - - pleckstrin homology domain containing, family A member 7a [Source:ZFIN;Acc:ZDB-GENE-050419-75]
66. irf2a ENSDARG00000007387 915 0.964 - 0.964 - - - - - - - interferon regulatory factor 2a [Source:ZFIN;Acc:ZDB-GENE-030131-4135]
67. abcb8 ENSDARG00000056672 589 0.964 - 0.964 - - - - - - - ATP-binding cassette, sub-family B (MDR/TAP), member 8 [Source:ZFIN;Acc:ZDB-GENE-050410-6]
68. fam83b ENSDARG00000078309 318 0.963 - 0.963 - - - - - - - family with sequence similarity 83, member B [Source:ZFIN;Acc:ZDB-GENE-030131-7066]
69. CR925758.1 CR925758.1 83 0.963 - 0.963 - - - - - - -
70. tctex1d2 ENSDARG00000054255 320 0.962 - 0.962 - - - - - - - Tctex1 domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-081104-219]
71. zgc:152938 ENSDARG00000102586 97 0.961 - 0.961 - - - - - - - zgc:152938 [Source:ZFIN;Acc:ZDB-GENE-061013-458]
72. MSI1 ENSDARG00000010710 478 0.961 - 0.961 - - - - - - - musashi RNA-binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050320-86]
73. si:dkey-162h11.3 41 0.96 - 0.960 - - - - - - - si:dkey-162h11.3, transcript variant X2
74. TNFRSF11B ENSDARG00000098377 98 0.96 - 0.960 - - - - - - - tumor necrosis factor receptor superfamily, member 11b [Source:ZFIN;Acc:ZDB-GENE-081104-76]
75. b3gnt3.4 ENSDARG00000058100 117 0.959 - 0.959 - - - - - - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3, tandem duplicate 4 [Source:ZFIN;Acc:ZDB-GENE-030131-8875]
76. ptpn3 ENSDARG00000055784 436 0.958 - 0.958 - - - - - - - protein tyrosine phosphatase, non-receptor type 3 [Source:ZFIN;Acc:ZDB-GENE-030131-2934]
77. THEM6_1 ENSDARG00000103914 469 0.958 - 0.958 - - - - - - - thioesterase superfamily member 6 [Source:HGNC Symbol;Acc:HGNC:29656]
78. ttpal ENSDARG00000070644, ENSDARG00000112925 471 0.957 - 0.957 - - - - - - - tocopherol (alpha) transfer protein-like [Source:ZFIN;Acc:ZDB-GENE-030131-296]
79. acaa1 ENSDARG00000004687 557 0.957 - 0.957 - - - - - - - acetyl-CoA acyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040704-48]
80. bmp7a ENSDARG00000018260 92 0.957 - 0.957 - - - - - - - bone morphogenetic protein 7a [Source:ZFIN;Acc:ZDB-GENE-000208-25]
81. CYP27B1 ENSDARG00000045015 119 0.956 - 0.956 - - - - - - - cytochrome P450, family 27, subfamily B, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-111005-2]
82. kat6a ENSDARG00000018907 250 0.955 - 0.955 - - - - - - - K(lysine) acetyltransferase 6A [Source:ZFIN;Acc:ZDB-GENE-021022-3]
83. dolpp1 ENSDARG00000036915 114 0.954 - 0.954 - - - - - - - dolichyldiphosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-041024-11]
84. si:ch211-214e3.5 ENSDARG00000074270 755 0.953 - 0.953 - - - - - - - si:ch211-214e3.5 [Source:ZFIN;Acc:ZDB-GENE-050208-19]
85. gpr173 ENSDARG00000042922 238 0.95 - 0.950 - - - - - - - G protein-coupled receptor 173 [Source:ZFIN;Acc:ZDB-GENE-000710-1]
86. rbm22 ENSDARG00000010238 523 0.948 - 0.948 - - - - - - - RNA binding motif protein 22 [Source:ZFIN;Acc:ZDB-GENE-040426-2298]
87. caprin2 ENSDARG00000020749 39 0.948 - 0.948 - - - - - - - caprin family member 2 [Source:ZFIN;Acc:ZDB-GENE-040812-2]
88. BX465203.2 BX465203.2 23 0.948 - 0.948 - - - - - - -
89. col12a1a ENSDARG00000078322 1833 0.948 - 0.948 - - - - - - - collagen, type XII, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-090728-1]
90. pdcd2l ENSDARG00000002754 417 0.947 - 0.947 - - - - - - - programmed cell death 2-like [Source:ZFIN;Acc:ZDB-GENE-040426-967]
91. pcdh1b ENSDARG00000036175 101 0.947 - 0.947 - - - - - - - protocadherin 1b [Source:ZFIN;Acc:ZDB-GENE-091015-2]
92. il13ra1 ENSDARG00000080020 443 0.946 - 0.946 - - - - - - - interleukin 13 receptor, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-060503-103]
93. rfng ENSDARG00000019746 627 0.946 - 0.946 - - - - - - - RFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:ZFIN;Acc:ZDB-GENE-030131-5418]
94. CABZ01071909.1_1 ENSDARG00000117524 86 0.945 - 0.945 - - - - - - -
95. mta3 ENSDARG00000054903, ENSDARG00000113436 353 0.945 - 0.945 - - - - - - - metastasis associated 1 family, member 3 [Source:ZFIN;Acc:ZDB-GENE-030131-6485]
96. si:dkey-52k20.13 si:dkey-52k20.13 428 0.944 - 0.944 - - - - - - -
97. rxrab ENSDARG00000035127 231 0.943 - 0.943 - - - - - - - retinoid x receptor, alpha b [Source:ZFIN;Acc:ZDB-GENE-990415-243]
98. plekha3 ENSDARG00000056601 213 0.942 - 0.942 - - - - - - - pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1252]
99. dguok ENSDARG00000075395, ENSDARG00000111034, ENSDARG00000114526 93 0.941 - 0.941 - - - - - - - deoxyguanosine kinase [Source:ZFIN;Acc:ZDB-GENE-040625-14]
100. arhgef18b ENSDARG00000042308 298 0.939 - 0.939 - - - - - - - rho/rac guanine nucleotide exchange factor (GEF) 18b [Source:ZFIN;Acc:ZDB-GENE-070705-462]

There are 828 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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