Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for dr1

Gene Name Gene ID Reads Annotation
dr1 ENSDARG00000105098, ENSDARG00000113528 5263 down-regulator of transcription 1 [Source:ZFIN;Acc:ZDB-GENE-061013-797]










Genes with expression patterns similar to dr1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. dr1 ENSDARG00000105098, ENSDARG00000113528 5263 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 down-regulator of transcription 1 [Source:ZFIN;Acc:ZDB-GENE-061013-797]
2. kif22 ENSDARG00000102624 3694 3.493 - - 0.838 - 0.935 - - 0.891 0.829 kinesin family member 22 [Source:ZFIN;Acc:ZDB-GENE-080204-34]
3. naa40 ENSDARG00000024109, ENSDARG00000090570 4759 3.263 - - - - 0.934 0.813 - 0.771 0.745 N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050417-105]
4. myef2 ENSDARG00000059398 6050 3.002 - 0.721 - - - - 0.739 0.826 0.716 myelin expression factor 2 [Source:ZFIN;Acc:ZDB-GENE-051120-114]
5. tgif1 ENSDARG00000059337 4020 2.927 - - 0.743 - - 0.701 0.730 - 0.753 TGFB-induced factor homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-030131-475]
6. tomm70a ENSDARG00000029639, ENSDARG00000112054 7715 2.576 - - - 0.998 - 0.722 - 0.856 - translocase of outer mitochondrial membrane 70 homolog A (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-8173]
7. ewsr1a ENSDARG00000020258, ENSDARG00000113252 11221 2.558 - - - 0.996 - - 0.739 - 0.823 EWS RNA-binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2317]
8. top2a ENSDARG00000024488 4273 2.543 - - - - - - 0.755 0.956 0.832 DNA topoisomerase II alpha [Source:ZFIN;Acc:ZDB-GENE-030131-2453]
9. cenpe ENSDARG00000063385 4428 2.464 - - - - 0.891 - 0.748 - 0.825 centromere protein E [Source:ZFIN;Acc:ZDB-GENE-060929-860]
10. rrm2_1 ENSDARG00000020711, ENSDARG00000078069 11634 2.458 - - 0.743 0.988 - 0.727 - - - ribonucleotide reductase M2 polypeptide [Source:ZFIN;Acc:ZDB-GENE-990415-25]
11. fzd3a ENSDARG00000021664 1958 2.437 - - 0.801 - - - - 0.925 0.711 frizzled class receptor 3a [Source:ZFIN;Acc:ZDB-GENE-990415-225]
12. ncalda ENSDARG00000070688 5069 2.437 - - - - - 0.794 0.719 0.924 - neurocalcin delta a [Source:ZFIN;Acc:ZDB-GENE-080220-28]
13. ube2e2 ENSDARG00000034670 5918 2.433 - - - - 0.914 0.732 0.787 - - ubiquitin-conjugating enzyme E2E 2 [Source:ZFIN;Acc:ZDB-GENE-040801-237]
14. ube2g1a ENSDARG00000015292, ENSDARG00000112281 3207 2.384 0.768 - - - 0.863 - - - 0.753 ubiquitin-conjugating enzyme E2G 1a (UBC7 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-6065]
15. fen1 ENSDARG00000011404 3358 2.351 - - 0.756 - 0.879 - - - 0.716 flap structure-specific endonuclease 1 [Source:ZFIN;Acc:ZDB-GENE-031112-11]
16. max ENSDARG00000024844 6035 2.347 - - - - - - 0.755 0.852 0.740 myc associated factor X [Source:ZFIN;Acc:ZDB-GENE-990415-152]
17. rbm8a ENSDARG00000016516 8789 2.347 - - - - 0.762 - 0.712 0.873 - RNA binding motif protein 8A [Source:ZFIN;Acc:ZDB-GENE-050306-51]
18. tmpob ENSDARG00000022978 8121 2.344 - - 0.777 - - 0.762 - - 0.805 thymopoietin b [Source:ZFIN;Acc:ZDB-GENE-050522-8]
19. CU571336.2 CU571336.2 2690 2.317 - 0.818 - - - - 0.787 - 0.712
20. her4.2_1 ENSDARG00000056729, ENSDARG00000094426 2383 2.31 - - 0.739 - - - - 0.860 0.711 hairy-related 4, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060815-1]
21. Sep-03 Sep-03 1124 2.294 - - 0.726 - - - - 0.839 0.729
22. stmn1a ENSDARG00000004169 21169 2.284 - 0.746 0.764 - - - - - 0.774 stathmin 1a [Source:ZFIN;Acc:ZDB-GENE-031006-14]
23. rrm1 ENSDARG00000014017 7296 2.238 - - - - - - 0.730 0.798 0.710 ribonucleotide reductase M1 polypeptide [Source:ZFIN;Acc:ZDB-GENE-990415-247]
24. fgfr2 ENSDARG00000058115 6743 2.229 - - 0.736 - - 0.749 - - 0.744 fibroblast growth factor receptor 2 [Source:ZFIN;Acc:ZDB-GENE-030323-1]
25. ewsr1b ENSDARG00000020465, ENSDARG00000117011 10260 2.223 - - 0.776 - - 0.737 0.710 - - EWS RNA-binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-030131-1600]
26. CWC15 ENSDARG00000013382 8969 1.827 - 0.834 - 0.993 - - - - - CWC15 spliceosome-associated protein homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040625-10]
27. tcf3b ENSDARG00000099999, ENSDARG00000112646 3589 1.81 - - - - - 0.857 - 0.953 - transcription factor 3b [Source:ZFIN;Acc:ZDB-GENE-051113-64]
28. sf3a1 ENSDARG00000041887 6702 1.804 - - - 0.999 - - - - 0.805 splicing factor 3a, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-030616-156]
29. brms1la ENSDARG00000006235 2011 1.797 - - - - 0.871 - - 0.926 - BRMS1 like transcriptional repressor a [Source:ZFIN;Acc:ZDB-GENE-050913-49]
30. luc7l3 ENSDARG00000014366 4416 1.774 - - - 0.999 - - - - 0.775 LUC7-like 3 pre-mRNA splicing factor [Source:ZFIN;Acc:ZDB-GENE-060616-375]
31. c1d ENSDARG00000021112 2839 1.769 - 0.825 - - - - - 0.944 - C1D nuclear receptor corepressor [Source:ZFIN;Acc:ZDB-GENE-041024-8]
32. ywhae1 ENSDARG00000006399, ENSDARG00000109636, ENSDARG00000109789 13364 1.756 - - - - - 0.864 - 0.892 - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030131-779]
33. utp11l ENSDARG00000039958, ENSDARG00000109895 1509 1.752 - 0.829 - - - - - 0.923 - UTP11-like, U3 small nucleolar ribonucleoprotein (yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-8093]
34. cdc14b ENSDARG00000021483 4958 1.749 - - - 0.997 - - - - 0.752 cell division cycle 14B [Source:ZFIN;Acc:ZDB-GENE-040426-820]
35. ranbp1 ENSDARG00000014817 3371 1.745 - - - 0.999 - - - - 0.746 RAN binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2548]
36. zgc:55461 ENSDARG00000116706, ENSDARG00000117112 2835 1.742 - - - - 0.868 - - 0.874 - zgc:55461 [Source:ZFIN;Acc:ZDB-GENE-040426-2879]
37. prdx3 ENSDARG00000032102, ENSDARG00000114240 10034 1.732 - - - 0.997 - - - 0.735 - peroxiredoxin 3 [Source:ZFIN;Acc:ZDB-GENE-030826-18]
38. prdm16 prdm16 1346 1.73 - - - - 0.873 - - 0.857 -
39. snrpd3l ENSDARG00000076283 7655 1.728 - - - - 0.884 - - - 0.844 small nuclear ribonucleoprotein D3 polypeptide, like [Source:ZFIN;Acc:ZDB-GENE-030131-5219]
40. srsf3a ENSDARG00000025397, ENSDARG00000100815 11622 1.726 - - - 0.996 - - 0.730 - - serine/arginine-rich splicing factor 3a [Source:ZFIN;Acc:ZDB-GENE-030616-631]
41. ncoa5 ENSDARG00000016345 5765 1.725 - - - 0.998 - - - - 0.727 nuclear receptor coactivator 5 [Source:ZFIN;Acc:ZDB-GENE-040912-155]
42. msi1 ENSDARG00000010710 2634 1.724 - - 0.777 - 0.947 - - - - musashi RNA-binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050320-86]
43. rbm4.2 ENSDARG00000055080 5241 1.723 - - - - 0.819 - - 0.904 - RNA binding motif protein 4.2 [Source:ZFIN;Acc:ZDB-GENE-030131-3019]
44. sirt2 ENSDARG00000011488 5389 1.721 - 0.723 - 0.998 - - - - - sirtuin 2 (silent mating type information regulation 2, homolog) 2 (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-1028]
45. pgam5 ENSDARG00000035608 4044 1.704 - - - - - - 0.829 0.875 - PGAM family member 5, serine/threonine protein phosphatase, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-030131-683]
46. srgap1 srgap1 2320 1.697 - - - - 0.875 - 0.822 - -
47. nr2f1a ENSDARG00000052695 5037 1.694 - - - - 0.925 - - - 0.769 nuclear receptor subfamily 2, group F, member 1a [Source:ZFIN;Acc:ZDB-GENE-980526-115]
48. marcksa ENSDARG00000004049 2518 1.686 - - - - 0.866 - - - 0.820 myristoylated alanine-rich protein kinase C substrate a [Source:ZFIN;Acc:ZDB-GENE-050522-145]
49. cnot1 ENSDARG00000004174, ENSDARG00000109411 4625 1.683 - - - - - 0.788 - 0.895 - CCR4-NOT transcription complex, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-040915-1]
50. dnaja2l ENSDARG00000010745 2367 1.68 - - - - - - - 0.919 0.761 DnaJ (Hsp40) homolog, subfamily A, member 2, like [Source:ZFIN;Acc:ZDB-GENE-030131-2884]
51. si:ch211-79l20.4 1305 1.68 - - - - - - - 0.924 0.756 si:ch211-79l20.4, transcript variant X3
52. GATAD2B ENSDARG00000005834 3855 1.676 - - - - - - - 0.903 0.773 GATA zinc finger domain containing 2B [Source:ZFIN;Acc:ZDB-GENE-060503-655]
53. ube2kb ENSDARG00000013505, ENSDARG00000114039 3968 1.675 - 0.766 - - - - - 0.909 - ubiquitin-conjugating enzyme E2Kb (UBC1 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-980605-9]
54. C12H10orf118 C12H10orf118 964 1.674 - - - - - 0.768 - 0.906 -
55. smndc1 ENSDARG00000056235, ENSDARG00000117084 3509 1.67 - - - - 0.924 - - - 0.746 survival motor neuron domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-614]
56. usp36 ENSDARG00000032327 1884 1.666 - 0.802 - - 0.864 - - - - ubiquitin specific peptidase 36 [Source:ZFIN;Acc:ZDB-GENE-030131-5450]
57. FAM168B ENSDARG00000101733, ENSDARG00000113953, ENSDARG00000115746 2175 1.664 - - - - 0.894 - - - 0.770 family with sequence similarity 168, member B [Source:ZFIN;Acc:ZDB-GENE-060929-180]
58. xpot ENSDARG00000099652 3026 1.664 - 0.885 - - - 0.779 - - - exportin, tRNA (nuclear export receptor for tRNAs) [Source:ZFIN;Acc:ZDB-GENE-041210-4]
59. hmgb1a ENSDARG00000099175, ENSDARG00000114353 17231 1.661 - - - - 0.825 - - - 0.836 high mobility group box 1a [Source:ZFIN;Acc:ZDB-GENE-030131-341]
60. puf60b ENSDARG00000001241 13827 1.659 - - - - - - - 0.929 0.730 poly-U binding splicing factor b [Source:ZFIN;Acc:ZDB-GENE-040625-116]
61. hmg20a ENSDARG00000031198 1763 1.658 - - - - 0.934 - - - 0.724 high mobility group 20A [Source:ZFIN;Acc:ZDB-GENE-030131-5107]
62. arih2 ENSDARG00000012848 7087 1.657 - - - - - - 0.727 0.930 - ariadne homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040426-2158]
63. psmb6 ENSDARG00000002240 8015 1.654 - - - - 0.861 - - - 0.793 proteasome subunit beta 6 [Source:ZFIN;Acc:ZDB-GENE-990415-216]
64. skp2 ENSDARG00000004937, ENSDARG00000114929 1584 1.653 - - - - - - - 0.936 0.717 S-phase kinase-associated protein 2, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-030219-158]
65. tmem50a ENSDARG00000015757 3244 1.653 - - - - 0.831 0.822 - - - transmembrane protein 50A [Source:ZFIN;Acc:ZDB-GENE-040426-2937]
66. sipa1l2 ENSDARG00000061640 4545 1.652 - - - - - - - 0.934 0.718 signal-induced proliferation-associated 1 like 2 [Source:ZFIN;Acc:ZDB-GENE-050208-66]
67. setbp1 ENSDARG00000093799 4499 1.651 - - - - - - - 0.902 0.749 SET binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-060526-72]
68. LDLRAD4 LDLRAD4 1237 1.65 - - - - - - - 0.918 0.732
69. hmgn3 ENSDARG00000036754, ENSDARG00000116728 11573 1.649 - - - - - - - 0.851 0.798 high mobility group nucleosomal binding domain 3 [Source:ZFIN;Acc:ZDB-GENE-041114-180]
70. arfrp1 ENSDARG00000057857 2840 1.649 - 0.784 - - - - - 0.865 - ADP-ribosylation factor related protein 1 [Source:ZFIN;Acc:ZDB-GENE-050227-14]
71. tmem35 ENSDARG00000052567 5685 1.648 - - - - 0.890 - - - 0.758 transmembrane protein 35 [Source:ZFIN;Acc:ZDB-GENE-030815-1]
72. sin3b ENSDARG00000062472 2025 1.647 - - - - 0.879 - - - 0.768 SIN3 transcription regulator family member B [Source:ZFIN;Acc:ZDB-GENE-030131-8264]
73. gipc1 ENSDARG00000104483 2913 1.646 - - 0.734 - - - - 0.912 - GIPC PDZ domain containing family, member 1 [Source:ZFIN;Acc:ZDB-GENE-060726-1]
74. prps1b ENSDARG00000037506, ENSDARG00000110507 4170 1.644 - - - - - - - 0.903 0.741 phosphoribosyl pyrophosphate synthetase 1B [Source:ZFIN;Acc:ZDB-GENE-030131-4011]
75. Sep-06 Sep-06 5465 1.643 - - - - - - 0.714 0.929 -
76. fbxl14a ENSDARG00000034497, ENSDARG00000110327 3132 1.643 - - - - 0.872 - 0.771 - - F-box and leucine-rich repeat protein 14a [Source:ZFIN;Acc:ZDB-GENE-030131-5920]
77. igf2bp3 ENSDARG00000010266 5789 1.641 - - - - 0.801 - - 0.840 - insulin-like growth factor 2 mRNA binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-000308-1]
78. hnrnpub ENSDARG00000004735 16496 1.639 - - - - - 0.790 - - 0.849 heterogeneous nuclear ribonucleoprotein Ub [Source:ZFIN;Acc:ZDB-GENE-030131-6422]
79. cyfip2 ENSDARG00000036375, ENSDARG00000110155, ENSDARG00000114426 2788 1.638 - - - - 0.894 - - - 0.744 cytoplasmic FMR1 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080724-2]
80. atrx ENSDARG00000042236, ENSDARG00000112921, ENSDARG00000116878 7922 1.638 - - - - - - 0.768 0.870 - alpha thalassemia/mental retardation syndrome X-linked homolog (human) [Source:ZFIN;Acc:ZDB-GENE-030912-11]
81. clasp2 ENSDARG00000020345 3382 1.636 - 0.723 - - - - - 0.913 - cytoplasmic linker associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2343]
82. nae1 ENSDARG00000011301, ENSDARG00000111542 1505 1.635 - - - - - - - 0.914 0.721 nedd8 activating enzyme E1 subunit 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1552]
83. cdk2 ENSDARG00000026577 2835 1.633 - 0.793 - - - - - - 0.840 cyclin-dependent kinase 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2741]
84. hmgb3a ENSDARG00000056725 15668 1.632 - - - - - - - 0.895 0.737 high mobility group box 3a [Source:ZFIN;Acc:ZDB-GENE-050428-1]
85. hnrnpa0b ENSDARG00000036162, ENSDARG00000112653 27740 1.632 - - - - - - - 0.827 0.805 heterogeneous nuclear ribonucleoprotein A0b [Source:ZFIN;Acc:ZDB-GENE-030131-6154]
86. dnajc5aa ENSDARG00000042948 2885 1.631 0.706 - - - - - - 0.925 - DnaJ (Hsp40) homolog, subfamily C, member 5aa [Source:ZFIN;Acc:ZDB-GENE-031113-20]
87. rbm15b ENSDARG00000078966, ENSDARG00000112832 1888 1.63 - 0.758 - - 0.872 - - - - RNA binding motif protein 15B [Source:ZFIN;Acc:ZDB-GENE-080204-91]
88. AP3B2 1874 1.629 - - - - - - - 0.919 0.710 adaptor related protein complex 3 beta 2 subunit, transcript variant X2
89. ssrp1a ENSDARG00000037397, ENSDARG00000116441 3999 1.627 - - - - - - - 0.848 0.779 structure specific recognition protein 1a [Source:ZFIN;Acc:ZDB-GENE-031118-9]
90. xkr6 xkr6 286 1.626 - - - - - 0.712 - 0.914 -
91. si:dkey-67c22.2 ENSDARG00000055389 6410 1.624 - 0.869 - - - - 0.755 - - si:dkey-67c22.2 [Source:ZFIN;Acc:ZDB-GENE-030131-5845]
92. acadvl ENSDARG00000016687 5329 1.621 - - - - 0.867 - - 0.754 - acyl-CoA dehydrogenase very long chain [Source:ZFIN;Acc:ZDB-GENE-030131-899]
93. foxp1b ENSDARG00000014181 2594 1.62 - - - - - - - 0.879 0.741 forkhead box P1b [Source:ZFIN;Acc:ZDB-GENE-041203-1]
94. srpk1b ENSDARG00000031560 2079 1.62 - - - - 0.883 - - - 0.737 SRSF protein kinase 1b [Source:ZFIN;Acc:ZDB-GENE-070112-2292]
95. si:ch211-194k22.8 ENSDARG00000096711 1318 1.62 - - - - - - - 0.913 0.707 si:ch211-194k22.8 [Source:ZFIN;Acc:ZDB-GENE-030131-1820]
96. FP245444.1 FP245444.1 1922 1.619 0.743 - - - 0.876 - - - -
97. C24H17orf96 C24H17orf96 1538 1.616 - - - - 0.893 - - - 0.723
98. pcif1 ENSDARG00000099084 2851 1.616 - - - - - - - 0.913 0.703 PDX1 C-terminal inhibiting factor 1 [Source:ZFIN;Acc:ZDB-GENE-120920-2]
99. edc4 ENSDARG00000062266, ENSDARG00000114070 2505 1.614 - 0.725 - - 0.889 - - - - enhancer of mRNA decapping 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5032]
100. psma2 ENSDARG00000040121 2504 1.614 - - - - - - 0.719 0.895 - proteasome subunit alpha 2 [Source:ZFIN;Acc:ZDB-GENE-050522-479]

There are 1444 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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