Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for dnmt3b

Gene Name Gene ID Reads Annotation
dnmt3b dnmt3b 2522










Genes with expression patterns similar to dnmt3b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. dnmt3b dnmt3b 2522 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. arid1aa ENSDARG00000101710 3644 2.983 - 0.806 0.703 - - - - 0.715 0.759 AT rich interactive domain 1Aa (SWI-like) [Source:ZFIN;Acc:ZDB-GENE-080220-35]
3. smc1al ENSDARG00000058203 8838 2.976 - 0.707 0.759 - - 0.726 - - 0.784 structural maintenance of chromosomes 1A, like [Source:ZFIN;Acc:ZDB-GENE-040426-57]
4. ilf3a ENSDARG00000058660, ENSDARG00000116860 3760 2.402 - 0.929 0.762 - - - 0.711 - - interleukin enhancer binding factor 3a [Source:ZFIN;Acc:ZDB-GENE-030131-3151]
5. pcnp ENSDARG00000037713 2754 2.378 - 0.815 - 0.852 - 0.711 - - - PEST proteolytic signal containing nuclear protein [Source:ZFIN;Acc:ZDB-GENE-041010-130]
6. ldb1a ENSDARG00000010137 3035 2.305 - 0.737 - - - 0.845 - - 0.723 LIM domain binding 1a [Source:ZFIN;Acc:ZDB-GENE-990415-138]
7. psmc5 ENSDARG00000015315 8458 2.289 - 0.771 - 0.742 - - 0.776 - - proteasome 26S subunit, ATPase 5 [Source:ZFIN;Acc:ZDB-GENE-030131-6547]
8. polr2a ENSDARG00000099966 5706 2.285 - 0.811 0.739 - - - - 0.735 - polymerase (RNA) II (DNA directed) polypeptide A [Source:ZFIN;Acc:ZDB-GENE-041008-78]
9. cpsf6 ENSDARG00000018618 3923 2.232 - 0.738 - - - - 0.737 - 0.757 cleavage and polyadenylation specific factor 6 [Source:ZFIN;Acc:ZDB-GENE-030131-5277]
10. u2af2b ENSDARG00000011740 6946 2.213 - - 0.716 - 0.722 0.775 - - - U2 small nuclear RNA auxiliary factor 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1881]
11. sumo3b ENSDARG00000035993 3414 2.181 - 0.743 0.729 - - - 0.709 - - small ubiquitin-like modifier 3b [Source:ZFIN;Acc:ZDB-GENE-040718-426]
12. srsf7a ENSDARG00000035325, ENSDARG00000110705 11788 2.178 - - 0.727 - - - - 0.742 0.709 serine/arginine-rich splicing factor 7a [Source:ZFIN;Acc:ZDB-GENE-040426-1798]
13. cdk6 ENSDARG00000070228 1778 2.168 - - 0.701 - - 0.759 0.708 - - cyclin-dependent kinase 6 [Source:ZFIN;Acc:ZDB-GENE-060503-786]
14. Sep-07 Sep-07 1827 1.653 - 0.894 - - - 0.759 - - -
15. naa40 ENSDARG00000024109, ENSDARG00000090570 4759 1.618 - 0.806 - - - - - - 0.812 N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050417-105]
16. nop58 ENSDARG00000104353 8497 1.612 - - - - - - 0.786 - 0.826 NOP58 ribonucleoprotein homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-2140]
17. sub1b ENSDARG00000007720, ENSDARG00000112010 2258 1.605 - 0.842 0.763 - - - - - - SUB1 homolog, transcriptional regulator b [Source:ZFIN;Acc:ZDB-GENE-040718-209]
18. chd4a ENSDARG00000063535, ENSDARG00000111791 4059 1.602 - 0.901 - - - - 0.701 - - chromodomain helicase DNA binding protein 4a [Source:ZFIN;Acc:ZDB-GENE-041111-187]
19. slbp ENSDARG00000100558 3405 1.577 - 0.799 0.778 - - - - - - stem-loop binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-9686]
20. thrap3b ENSDARG00000098228 4396 1.576 - 0.853 - - - - - - 0.723 thyroid hormone receptor associated protein 3b [Source:ZFIN;Acc:ZDB-GENE-040516-9]
21. tia1 ENSDARG00000052536, ENSDARG00000114478 4392 1.572 - - 0.830 - - - - - 0.742 TIA1 cytotoxic granule-associated RNA binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-1506]
22. apex1 ENSDARG00000045843 6345 1.571 - - 0.774 - - - 0.797 - - APEX nuclease (multifunctional DNA repair enzyme) 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2761]
23. uck2b ENSDARG00000022213 1542 1.566 - 0.827 - - - - 0.739 - - uridine-cytidine kinase 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5265]
24. grb2b ENSDARG00000038059 9050 1.559 - - - - - 0.810 0.749 - - growth factor receptor-bound protein 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1975]
25. AL844567.1 AL844567.1 1605 1.558 - 0.847 - - - - - - 0.711
26. atf7ip ENSDARG00000069619 5495 1.554 - - - - - 0.759 0.795 - - activating transcription factor 7 interacting protein [Source:ZFIN;Acc:ZDB-GENE-061103-178]
27. npm1b ENSDARG00000037675 5448 1.547 - - - - - - 0.749 0.798 - nucleophosmin 1b [Source:ZFIN;Acc:ZDB-GENE-080723-7]
28. pds5a ENSDARG00000055022, ENSDARG00000115793 3842 1.546 - - - - - 0.774 - 0.772 - PDS5 cohesin associated factor A [Source:ZFIN;Acc:ZDB-GENE-040426-1612]
29. ankra2 ENSDARG00000035399, ENSDARG00000111289 1303 1.544 - 0.771 - - - - 0.773 - - ankyrin repeat, family A (RFXANK-like), 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2141]
30. cdh11 ENSDARG00000021442 1601 1.539 - 0.815 - - - - - - 0.724 cadherin 11, type 2, OB-cadherin (osteoblast) [Source:ZFIN;Acc:ZDB-GENE-980526-170]
31. ncapg ENSDARG00000070109, ENSDARG00000109474, ENSDARG00000113314, ENSDARG00000113623 2338 1.537 - 0.832 - - - 0.705 - - - non-SMC condensin I complex, subunit G [Source:ZFIN;Acc:ZDB-GENE-041111-282]
32. si:dkeyp-44a8.2 ENSDARG00000092493 8308 1.534 - - - - - - 0.822 - 0.712 si:dkeyp-44a8.2 [Source:ZFIN;Acc:ZDB-GENE-070705-542]
33. eif3g ENSDARG00000016889 10367 1.532 - - - - - 0.726 0.806 - - eukaryotic translation initiation factor 3, subunit G [Source:ZFIN;Acc:ZDB-GENE-040426-1076]
34. adh5 ENSDARG00000080010, ENSDARG00000111574 4980 1.527 - 0.748 - - - - 0.779 - - alcohol dehydrogenase 5 [Source:ZFIN;Acc:ZDB-GENE-011003-1]
35. arhgef2 ENSDARG00000075819 2173 1.524 - - 0.772 - - - - - 0.752 rho/rac guanine nucleotide exchange factor (GEF) 2 [Source:ZFIN;Acc:ZDB-GENE-030717-1]
36. rbb4 rbb4 15541 1.523 - - 0.766 - - - - - 0.757
37. mto1 ENSDARG00000055679 859 1.522 - 0.774 - - - - 0.748 - - mitochondrial tRNA translation optimization 1 [Source:ZFIN;Acc:ZDB-GENE-070209-253]
38. nxf1 ENSDARG00000055076 3251 1.519 - - - - - - 0.762 - 0.757 nuclear RNA export factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2585]
39. fbxw11b ENSDARG00000017230, ENSDARG00000112841 2593 1.518 - - - - - 0.778 - - 0.740 F-box and WD repeat domain containing 11b [Source:ZFIN;Acc:ZDB-GENE-040426-2903]
40. sec22a ENSDARG00000078328 1207 1.514 - 0.766 - - - - 0.748 - - SEC22 homolog A, vesicle trafficking protein [Source:ZFIN;Acc:ZDB-GENE-030131-3553]
41. h3f3a 66671 1.513 - - - - - - 0.773 0.740 - H3 histone, family 3A, transcript variant X1
42. CPEB2 ENSDARG00000052604 2646 1.511 - 0.787 - - - 0.724 - - - cytoplasmic polyadenylation element binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-130530-639]
43. npm1a ENSDARG00000014329, ENSDARG00000113199 31910 1.508 - - - - - - 0.760 - 0.748 nucleophosmin 1a [Source:ZFIN;Acc:ZDB-GENE-021028-1]
44. flrt3 ENSDARG00000076895 3516 1.506 - - - - - - 0.755 - 0.751 fibronectin leucine rich transmembrane 3 [Source:ZFIN;Acc:ZDB-GENE-030131-1988]
45. RBM33 RBM33 1954 1.504 0.761 - - 0.743 - - - - -
46. fen1 ENSDARG00000011404 3358 1.503 - - - - - - 0.762 - 0.741 flap structure-specific endonuclease 1 [Source:ZFIN;Acc:ZDB-GENE-031112-11]
47. ints1 ENSDARG00000100419 1958 1.503 - - - - - - 0.760 - 0.743 integrator complex subunit 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6523]
48. snrpa ENSDARG00000018890 4593 1.502 - - 0.761 - - - - 0.741 - small nuclear ribonucleoprotein polypeptide A [Source:ZFIN;Acc:ZDB-GENE-030131-2841]
49. matr3l1.1_1 ENSDARG00000000394, ENSDARG00000001162 1860 1.5 - - - 0.706 - - 0.794 - - matrin 3-like 1.1 [Source:ZFIN;Acc:ZDB-GENE-030616-40]
50. sephs1 ENSDARG00000058292 3347 1.495 - - - - 0.710 - - - 0.785 selenophosphate synthetase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3670]
51. usp5 ENSDARG00000014517, ENSDARG00000114598 1969 1.495 - 0.778 - - - - 0.717 - - ubiquitin specific peptidase 5 (isopeptidase T) [Source:ZFIN;Acc:ZDB-GENE-040426-2584]
52. mad2l1 ENSDARG00000004713 3398 1.494 - - - - - - 0.792 - 0.702 MAD2 mitotic arrest deficient-like 1 (yeast) [Source:ZFIN;Acc:ZDB-GENE-030515-3]
53. stmn1a ENSDARG00000004169 21169 1.492 - - - - - - 0.757 - 0.735 stathmin 1a [Source:ZFIN;Acc:ZDB-GENE-031006-14]
54. ppp4r2a ENSDARG00000026540 1782 1.491 - - 0.752 - - - 0.739 - - protein phosphatase 4, regulatory subunit 2a [Source:ZFIN;Acc:ZDB-GENE-030131-4922]
55. ubap2 ubap2 4167 1.488 - 0.781 - - - - - - 0.707
56. nol9 ENSDARG00000077751 2471 1.485 - 0.777 - - - - - 0.708 - nucleolar protein 9 [Source:ZFIN;Acc:ZDB-GENE-070629-1]
57. si:ch211-69g19.2 ENSDARG00000070656, ENSDARG00000110191, ENSDARG00000114528 2860 1.484 - 0.747 - 0.737 - - - - - si:ch211-69g19.2 [Source:ZFIN;Acc:ZDB-GENE-030804-13]
58. parp1 ENSDARG00000019529 6787 1.483 - - 0.763 - - - - - 0.720 poly (ADP-ribose) polymerase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3955]
59. suz12b ENSDARG00000098924, ENSDARG00000114239, ENSDARG00000114524 1947 1.481 - - - 0.750 - - - 0.731 - SUZ12, polycomb repressive complex 2 subunit b [Source:ZFIN;Acc:ZDB-GENE-030131-3255]
60. si:ch211-198j3.1 si:ch211-198j3.1 5487 1.48 - - - - - 0.770 - - 0.710
61. srpk1b ENSDARG00000031560 2079 1.479 - - 0.708 - - - 0.771 - - SRSF protein kinase 1b [Source:ZFIN;Acc:ZDB-GENE-070112-2292]
62. tnpo2 ENSDARG00000038239 2469 1.478 - - - - - - 0.761 - 0.717 transportin 2 (importin 3, karyopherin beta 2b) [Source:ZFIN;Acc:ZDB-GENE-040822-16]
63. cnot1 ENSDARG00000004174, ENSDARG00000109411 4625 1.474 - - - - - - 0.749 - 0.725 CCR4-NOT transcription complex, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-040915-1]
64. psmb6 ENSDARG00000002240 8015 1.474 - 0.720 - - - - - - 0.754 proteasome subunit beta 6 [Source:ZFIN;Acc:ZDB-GENE-990415-216]
65. kdm4b ENSDARG00000099675 2037 1.473 - - - - - - - 0.737 0.736 lysine (K)-specific demethylase 4B [Source:ZFIN;Acc:ZDB-GENE-060503-664]
66. si:dkey-67c22.2 ENSDARG00000055389 6410 1.472 - - - - - 0.704 0.768 - - si:dkey-67c22.2 [Source:ZFIN;Acc:ZDB-GENE-030131-5845]
67. klhdc4 ENSDARG00000100206, ENSDARG00000113735 2362 1.471 - 0.742 - - - - 0.729 - - kelch domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-030131-2057]
68. irf2bpl ENSDARG00000004297 1861 1.471 - - - - - 0.734 0.737 - - interferon regulatory factor 2 binding protein-like [Source:ZFIN;Acc:ZDB-GENE-040426-1968]
69. arpp19b ENSDARG00000039880 4823 1.47 - - - - - - 0.748 - 0.722 cAMP-regulated phosphoprotein 19b [Source:ZFIN;Acc:ZDB-GENE-040426-930]
70. elf2b ENSDARG00000079626, ENSDARG00000117064 3057 1.467 - - - - - 0.757 - 0.710 - E74-like factor 2b (ets domain transcription factor) [Source:ZFIN;Acc:ZDB-GENE-031215-1]
71. tcf20 ENSDARG00000078348 1051 1.467 - - - 0.745 - 0.722 - - - transcription factor 20 [Source:ZFIN;Acc:ZDB-GENE-110411-97]
72. snrpc ENSDARG00000009871 9567 1.464 - - - - - - 0.733 - 0.731 small nuclear ribonucleoprotein polypeptide C [Source:ZFIN;Acc:ZDB-GENE-020419-26]
73. yeats4 ENSDARG00000045874 1168 1.462 - - - 0.707 - - 0.755 - - YEATS domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-040718-252]
74. GATAD2B ENSDARG00000005834 3855 1.462 - - - - - 0.730 - - 0.732 GATA zinc finger domain containing 2B [Source:ZFIN;Acc:ZDB-GENE-060503-655]
75. kifc1 ENSDARG00000001558 6658 1.461 - - - - - 0.730 0.731 - - kinesin family member C1 [Source:ZFIN;Acc:ZDB-GENE-000208-21]
76. ier5l ENSDARG00000054906, ENSDARG00000110793, ENSDARG00000114072 4216 1.461 - - - - - 0.711 - - 0.750 immediate early response 5-like [Source:ZFIN;Acc:ZDB-GENE-030131-5134]
77. aspm ENSDARG00000103754 5708 1.461 0.743 - 0.718 - - - - - - abnormal spindle microtubule assembly [Source:ZFIN;Acc:ZDB-GENE-050208-620]
78. marcksa ENSDARG00000004049 2518 1.458 - - - - - - - 0.730 0.728 myristoylated alanine-rich protein kinase C substrate a [Source:ZFIN;Acc:ZDB-GENE-050522-145]
79. atxn2l ENSDARG00000011597, ENSDARG00000112336 2104 1.458 - 0.744 - - - 0.714 - - - ataxin 2-like [Source:ZFIN;Acc:ZDB-GENE-030131-3246]
80. ezh2 ENSDARG00000010571 3273 1.457 - - 0.742 - - - - - 0.715 enhancer of zeste 2 polycomb repressive complex 2 subunit [Source:ZFIN;Acc:ZDB-GENE-041111-259]
81. TAF15 ENSDARG00000070019 5102 1.456 - - 0.751 - - - - - 0.705 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-061215-102]
82. hirip3 ENSDARG00000027749, ENSDARG00000115688 5875 1.456 - - 0.753 - - - 0.703 - - HIRA interacting protein 3 [Source:ZFIN;Acc:ZDB-GENE-030131-5753]
83. ncapd3 ENSDARG00000034773, ENSDARG00000111405 823 1.455 - 0.743 0.712 - - - - - - non-SMC condensin II complex, subunit D3 [Source:ZFIN;Acc:ZDB-GENE-040426-737]
84. lbr ENSDARG00000014013 4835 1.453 - - - - 0.727 - - - 0.726 lamin B receptor [Source:ZFIN;Acc:ZDB-GENE-030804-11]
85. msrb3 ENSDARG00000045658 988 1.453 - 0.735 - - - 0.718 - - - methionine sulfoxide reductase B3 [Source:ZFIN;Acc:ZDB-GENE-040625-74]
86. akirin1 ENSDARG00000039969, ENSDARG00000116670 2533 1.452 - - - - - - 0.723 - 0.729 akirin 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2178]
87. e2f8 ENSDARG00000057323 1432 1.452 - 0.715 - - - - - - 0.737 E2F transcription factor 8 [Source:ZFIN;Acc:ZDB-GENE-041111-260]
88. MAP4K4 ENSDARG00000098670 4665 1.452 - - 0.720 - - - - - 0.732 mitogen-activated protein kinase kinase kinase kinase 4 [Source:ZFIN;Acc:ZDB-GENE-030131-6722]
89. tcf3b ENSDARG00000099999, ENSDARG00000112646 3589 1.452 - - - - - - 0.708 - 0.744 transcription factor 3b [Source:ZFIN;Acc:ZDB-GENE-051113-64]
90. celf1 ENSDARG00000005315 5598 1.451 0.722 - - - - - 0.729 - - cugbp, Elav-like family member 1 [Source:ZFIN;Acc:ZDB-GENE-000501-1]
91. plcg1 ENSDARG00000038442 5324 1.449 - 0.739 - - - - 0.710 - - phospholipase C, gamma 1 [Source:ZFIN;Acc:ZDB-GENE-030421-3]
92. srsf2b ENSDARG00000103893 1437 1.449 - - 0.704 - - 0.745 - - - serine/arginine-rich splicing factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-2420]
93. hnrpl 6412 1.448 - - - - - - 0.726 - 0.722 heterogeneous nuclear ribonucleoprotein L, transcript variant X1
94. eif2s1a ENSDARG00000005827 5992 1.448 - - - - - - - 0.742 0.706 eukaryotic translation initiation factor 2, subunit 1 alpha a [Source:ZFIN;Acc:ZDB-GENE-030131-526]
95. u2af1 ENSDARG00000015325 3217 1.447 - - - - - 0.720 - - 0.727 U2 small nuclear RNA auxiliary factor 1 [Source:ZFIN;Acc:ZDB-GENE-020419-1]
96. tpx2 ENSDARG00000078654 8120 1.446 - 0.709 - - - - 0.737 - - TPX2, microtubule-associated, homolog (Xenopus laevis) [Source:ZFIN;Acc:ZDB-GENE-030131-9652]
97. hmmr ENSDARG00000021794, ENSDARG00000111088 2009 1.444 - 0.721 - - - - - 0.723 - hyaluronan-mediated motility receptor (RHAMM) [Source:ZFIN;Acc:ZDB-GENE-030131-731]
98. arglu1a ENSDARG00000019223 8716 1.444 - - - - - 0.733 0.711 - - arginine and glutamate rich 1a [Source:ZFIN;Acc:ZDB-GENE-040426-2914]
99. rbb4l ENSDARG00000015208 5542 1.442 - - 0.723 - - 0.719 - - - retinoblastoma binding protein 4, like [Source:ZFIN;Acc:ZDB-GENE-030131-848]
100. ilf2 ENSDARG00000014591 14543 1.441 - - 0.723 - - - - - 0.718 interleukin enhancer binding factor 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2345]

There are 1054 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA