Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for dmrt1

Gene Name Gene ID Reads Annotation
dmrt1 ENSDARG00000007349 16 doublesex and mab-3 related transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-050511-1]










Genes with expression patterns similar to dmrt1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. dmrt1 ENSDARG00000007349 16 8 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 doublesex and mab-3 related transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-050511-1]
2. nid2b ENSDARG00000009471 4 2.711 - 1.000 - 0.869 - - 0.842 - - nidogen 2b (osteonidogen) [Source:ZFIN;Acc:ZDB-GENE-040724-143]
3. si:ch211-154o6.3_1 ENSDARG00000099846, ENSDARG00000112144 10 2 - 1.000 - - - 1.000 - - - si:ch211-154o6.3 [Source:ZFIN;Acc:ZDB-GENE-030131-1030]
4. mcm5_1 ENSDARG00000019507 10 2 - 1.000 - - - 1.000 - - - minichromosome maintenance complex component 5 [Source:ZFIN;Acc:ZDB-GENE-021209-1]
5. fkbp6 ENSDARG00000030133, ENSDARG00000099077 6 2 - 1.000 - - - 1.000 - - - FK506 binding protein 6 [Source:NCBI gene;Acc:402839]
6. si:dkeyp-33e11.1 6 2 - 1.000 - - - 1.000 - - - si:dkeyp-33e11.1, transcript variant X3
7. col8a1b ENSDARG00000003533 18 1.942 - 1.000 - - 0.942 - - - - collagen, type VIII, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-060503-140]
8. EXD1 ENSDARG00000098669 27 1.941 - 0.941 - - - 1.000 - - - exonuclease 3'-5' domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060825-267]
9. fem1a ENSDARG00000067966 11 1.939 - - - - 0.939 1.000 - - - fem-1 homolog a (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-030131-5824]
10. CABZ01057951.1 CABZ01057951.1 10 1.932 - 1.000 - - - - - 0.932 -
11. slc1a9 ENSDARG00000098269 12 1.927 - 1.000 - - - - 0.927 - - solute carrier family 1 (glutamate transporter), member 9 [Source:ZFIN;Acc:ZDB-GENE-101111-9]
12. fbxo36b ENSDARG00000039152 7 1.919 - - - - 0.939 - - - 0.980 F-box protein 36b [Source:ZFIN;Acc:ZDB-GENE-060825-271]
13. zgc:165409_1 ENSDARG00000091385 65 1.917 - 1.000 - - - - 0.917 - - zgc:165409 [Source:ZFIN;Acc:ZDB-GENE-070615-19]
14. PLA2G3 ENSDARG00000008948 23 1.908 - - - - 0.924 - - 0.984 - phospholipase A2 group III [Source:ZFIN;Acc:ZDB-GENE-051113-96]
15. BX004785.2 ENSDARG00000093487 10 1.907 - - - - 0.927 - - - 0.980
16. si:ch211-199m9.2 si:ch211-199m9.2 9 1.888 - 1.000 0.888 - - - - - -
17. f13b ENSDARG00000101353 2 1.888 - - 0.888 - - 1.000 - - - coagulation factor XIII, B polypeptide [Source:ZFIN;Acc:ZDB-GENE-050208-701]
18. LRRK1_1 LRRK1_1 11 1.881 - 1.000 - - 0.881 - - - -
19. NFATC4 ENSDARG00000054162 44 1.873 - 1.000 - - - 0.873 - - - nuclear factor of activated T cells 4 [Source:ZFIN;Acc:ZDB-GENE-070912-659]
20. cldn15lb ENSDARG00000100844 46 1.859 - - - 0.906 - 0.953 - - - claudin 15-like b [Source:ZFIN;Acc:ZDB-GENE-040718-145]
21. PROC PROC 11 1.842 - - - - - 1.000 0.842 - -
22. polm ENSDARG00000103470 49 1.842 - - - - - 1.000 0.842 - - polymerase (DNA directed), mu [Source:ZFIN;Acc:ZDB-GENE-040426-911]
23. CU457778.1 ENSDARG00000098976 38 1.842 - 1.000 - - - - 0.842 - - uncharacterized LOC100535115 [Source:NCBI gene;Acc:100535115]
24. HYKK_1 HYKK_1 4 1.842 - 1.000 - - - - 0.842 - -
25. si:ch211-120c15.1 si:ch211-120c15.1 20 1.842 - 1.000 - - - - 0.842 - -
26. fermt3a fermt3a 56 1.842 - 1.000 - - - - 0.842 - -
27. n6amt2 7 1.842 - 1.000 - - - - 0.842 - - N-6 adenine-specific DNA methyltransferase 2 (putative), transcript variant X1
28. TNFRSF14_4 TNFRSF14_4 5 1.842 - - - - - - 0.842 1.000 -
29. AL954676.2 AL954676.2 50 1.833 - 1.000 - 0.833 - - - - -
30. GAS2 18 1.819 - 1.000 - - - - - 0.819 - growth arrest specific 2, transcript variant X1
31. ZNF337_11 ZNF337_11 11 1.809 - 1.000 - - - - - - 0.809
32. tmem79a ENSDARG00000071250 48 1.806 - - - - - 0.952 - - 0.854 transmembrane protein 79a [Source:ZFIN;Acc:ZDB-GENE-060503-538]
33. AL954698.1 ENSDARG00000098202 377 1.78 - - - - - 1.000 0.780 - -
34. gyg2 ENSDARG00000033380 12 1.779 - - 0.793 0.986 - - - - - glycogenin 2 [Source:ZFIN;Acc:ZDB-GENE-080723-74]
35. abcb9 ENSDARG00000056200, ENSDARG00000109326 63 1.777 - 1.000 - - - 0.777 - - - ATP-binding cassette, sub-family B (MDR/TAP), member 9 [Source:ZFIN;Acc:ZDB-GENE-050517-12]
36. znf512 ENSDARG00000041910 20 1.77 - 0.770 - - - 1.000 - - - zinc finger protein 512 [Source:ZFIN;Acc:ZDB-GENE-041014-346]
37. mettl25 ENSDARG00000045754 36 1.763 - 1.000 - - - - 0.763 - - methyltransferase like 25 [Source:ZFIN;Acc:ZDB-GENE-041210-90]
38. dazl ENSDARG00000036214 11 1.761 - - - 0.817 - - 0.944 - - deleted in azoospermia-like [Source:ZFIN;Acc:ZDB-GENE-000405-6]
39. si:dkey-20d21.12 ENSDARG00000092123 38 1.748 - 1.000 - - 0.748 - - - - si:dkey-20d21.12 [Source:ZFIN;Acc:ZDB-GENE-081104-365]
40. cdk5r1a ENSDARG00000037916 46 1.746 - 1.000 - - - 0.746 - - - cyclin-dependent kinase 5, regulatory subunit 1a (p35) [Source:ZFIN;Acc:ZDB-GENE-080723-17]
41. ralgapa1 ENSDARG00000076889 36 1.744 - - - - - 1.000 0.744 - - Ral GTPase activating protein, alpha subunit 1 (catalytic) [Source:ZFIN;Acc:ZDB-GENE-080806-1]
42. LYPLAL1 ENSDARG00000088764 87 1.738 - 0.865 - - - - 0.873 - - lysophospholipase-like 1 [Source:ZFIN;Acc:ZDB-GENE-050306-32]
43. snx24 ENSDARG00000053527 31 1.738 - - - - 0.925 - - - 0.813 sorting nexin 24 [Source:ZFIN;Acc:ZDB-GENE-050913-45]
44. ABCC10 ENSDARG00000077988, ENSDARG00000111885, ENSDARG00000113210 81 1.724 - - - - - 0.842 - 0.882 - ATP-binding cassette, sub-family C (CFTR/MRP), member 10 [Source:ZFIN;Acc:ZDB-GENE-050517-24]
45. spi1a ENSDARG00000067797 113 1.724 - 0.880 - - - 0.844 - - - Spi-1 proto-oncogene a [Source:ZFIN;Acc:ZDB-GENE-060825-351]
46. samsn1a ENSDARG00000054543 28 1.709 - - - - - 0.952 0.757 - - SAM domain, SH3 domain and nuclear localisation signals 1a [Source:ZFIN;Acc:ZDB-GENE-030131-8639]
47. pabpn1l ENSDARG00000087996, ENSDARG00000113382 40 1.705 - - - - - 1.000 0.705 - - poly(A) binding protein, nuclear 1-like (cytoplasmic) [Source:ZFIN;Acc:ZDB-GENE-080709-5]
48. CU915778.2 CU915778.2 194 1.702 - 0.880 - - - - 0.822 - -
49. BX927369.1 ENSDARG00000105047 21 1.7 - - 0.812 - - - 0.888 - -
50. zgc:154040 16 1.69 - - - - - - - 0.710 0.980 zgc:154040
51. golga2 ENSDARG00000063197 30 1.667 - 0.794 - - - 0.873 - - - golgin A2 [Source:ZFIN;Acc:ZDB-GENE-081030-1]
52. esr1 ENSDARG00000004111, ENSDARG00000112357 19 1.657 - - 0.786 - - - 0.871 - - estrogen receptor 1 [Source:ZFIN;Acc:ZDB-GENE-020806-5]
53. scara3 ENSDARG00000008060 169 1.645 - - 0.825 - 0.820 - - - - scavenger receptor class A, member 3 [Source:ZFIN;Acc:ZDB-GENE-041014-317]
54. HTRA4 ENSDARG00000005943 77 1.643 - - - - 0.880 0.763 - - - HtrA serine peptidase 4 [Source:ZFIN;Acc:ZDB-GENE-131120-192]
55. npas2 ENSDARG00000016536, ENSDARG00000116993 35 1.62 - - - - - - 0.842 - 0.778 neuronal PAS domain protein 2 [Source:ZFIN;Acc:ZDB-GENE-030408-3]
56. si:dkey-14d8.9 si:dkey-14d8.9 66 1.619 - 0.771 - - - - 0.848 - -
57. piwil2 ENSDARG00000062601 14 1.614 - - - - 0.897 0.717 - - - piwi-like RNA-mediated gene silencing 2 [Source:ZFIN;Acc:ZDB-GENE-060526-345]
58. CT955963.1 ENSDARG00000100370 23 1.603 - 0.794 - 0.809 - - - - -
59. baiap2b ENSDARG00000103333, ENSDARG00000111085, ENSDARG00000112327, ENSDARG00000113723 30 1.589 - - - 0.713 - - - 0.876 - BAI1-associated protein 2b [Source:ZFIN;Acc:ZDB-GENE-100812-7]
60. nanos3 ENSDARG00000068255 319 1.557 - - - - - 0.768 0.789 - - nanos homolog 3 [Source:ZFIN;Acc:ZDB-GENE-011221-1]
61. CU856207.1 CU856207.1 87 1.545 - - 0.811 - - - 0.734 - -
62. rasal3 ENSDARG00000089933 17 1.545 - - - - - - 0.763 - 0.782 RAS protein activator like 3 [Source:ZFIN;Acc:ZDB-GENE-101130-3]
63. ACOT12 ENSDARG00000054534 61 1.536 - - 0.710 - - - - 0.826 - acyl-CoA thioesterase 12 [Source:HGNC Symbol;Acc:HGNC:24436]
64. ube2r2 ENSDARG00000058740 83 1.531 - 0.710 - - - - - 0.821 - ubiquitin-conjugating enzyme E2R 2 [Source:ZFIN;Acc:ZDB-GENE-040718-344]
65. dnm2a ENSDARG00000069937 32 1.512 - 0.780 - - - 0.732 - - - dynamin 2a [Source:ZFIN;Acc:ZDB-GENE-050913-84]
66. si:dkey-206m15.8 16 1.508 - - - - - - - 0.781 0.727 si:dkey-206m15.8
67. kcnk13a ENSDARG00000008212 136 1.498 - - - 0.788 0.710 - - - - potassium channel, subfamily K, member 13a [Source:ZFIN;Acc:ZDB-GENE-080219-46]
68. FAM120A ENSDARG00000075021 73 1.489 - 0.726 - - - - 0.763 - - family with sequence similarity 120A [Source:ZFIN;Acc:ZDB-GENE-110131-10]
69. zgc:174700 zgc:174700 35 1.451 - - - 0.717 - - 0.734 - -
70. elf3 ENSDARG00000077982 211 1.445 - - - - - 0.702 0.743 - - E74-like factor 3 (ets domain transcription factor, epithelial-specific ) [Source:ZFIN;Acc:ZDB-GENE-030131-8760]
71. MOB2 MOB2 4 1 - 1.000 - - - - - - -
72. csf2rb ENSDARG00000076586, ENSDARG00000112627, ENSDARG00000114668 9 1 - 1.000 - - - - - - - colony stimulating factor 2 receptor, beta, low-affinity (granulocyte-macrophage) [Source:ZFIN;Acc:ZDB-GENE-080115-1]
73. DYNLRB2 DYNLRB2 12 1 - - - - - 1.000 - - -
74. CU855821.2 CU855821.2 21 1 - - - 1.000 - - - - -
75. mtcl1 ENSDARG00000091408 6 1 - - - - - 1.000 - - - microtubule crosslinking factor 1 [Source:ZFIN;Acc:ZDB-GENE-120508-3]
76. tbc1d20 ENSDARG00000032298 1 1 - 1.000 - - - - - - - TBC1 domain family, member 20 [Source:ZFIN;Acc:ZDB-GENE-050626-61]
77. illr3 ENSDARG00000018327 5 1 - - - - - 1.000 - - - immune-related, lectin-like receptor 3 [Source:ZFIN;Acc:ZDB-GENE-050311-4]
78. si:dkeyp-98a7.10 si:dkeyp-98a7.10 7 1 - - - - - - - 1.000 -
79. CR927050.1 ENSDARG00000099180 5 1 - - - - - 1.000 - - -
80. itpr2 ENSDARG00000011909 3 1 - 1.000 - - - - - - - inositol 1,4,5-trisphosphate receptor, type 2 [Source:ZFIN;Acc:ZDB-GENE-050419-192]
81. kcnj1a.2 ENSDARG00000090866 8 1 - - - - - 1.000 - - - potassium inwardly-rectifying channel, subfamily J, member 1a, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-050327-22]
82. phf21aa ENSDARG00000006878 31 1 - 1.000 - - - - - - - PHD finger protein 21Aa [Source:ZFIN;Acc:ZDB-GENE-050208-99]
83. prl ENSDARG00000037946 80 1 - 1.000 - - - - - - - prolactin [Source:ZFIN;Acc:ZDB-GENE-030513-1]
84. panx1b ENSDARG00000014910, ENSDARG00000112399 136 1 - 1.000 - - - - - - - pannexin 1b [Source:ZFIN;Acc:ZDB-GENE-070705-192]
85. lrrc3b ENSDARG00000063215 0 1 - 1.000 - - - - - - - leucine rich repeat containing 3B [Source:ZFIN;Acc:ZDB-GENE-070410-55]
86. dclre1a ENSDARG00000091768 94 1 - 1.000 - - - - - - - DNA cross-link repair 1A (PSO2 homolog, S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050522-124]
87. si:dkey-105h11.2 13 1 - - - 1.000 - - - - - si:dkey-105h11.2
88. ZC3H8 ZC3H8 114 1 - - - - - 1.000 - - -
89. aatkb ENSDARG00000104442 392 1 - 1.000 - - - - - - - apoptosis-associated tyrosine kinase b [Source:ZFIN;Acc:ZDB-GENE-100812-6]
90. tatdn2 ENSDARG00000070618 10 1 - - - - - 1.000 - - - TatD DNase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-081022-51]
91. pglyrp2 ENSDARG00000062998 11 1 - - - - - 1.000 - - - peptidoglycan recognition protein 2 [Source:ZFIN;Acc:ZDB-GENE-071227-1]
92. svopb ENSDARG00000014951 1 1 - - - - - 1.000 - - - SV2 related protein b [Source:ZFIN;Acc:ZDB-GENE-070705-359]
93. sergef ENSDARG00000070986, ENSDARG00000111782 48 1 - 1.000 - - - - - - - secretion regulating guanine nucleotide exchange factor [Source:ZFIN;Acc:ZDB-GENE-061220-11]
94. BX927122.3 BX927122.3 19 1 - 1.000 - - - - - - -
95. SH3TC1 ENSDARG00000077330 8 1 - - - 1.000 - - - - - SH3 domain and tetratricopeptide repeats 1 [Source:HGNC Symbol;Acc:HGNC:26009]
96. echdc1 68 1 - - - - - 1.000 - - - enoyl CoA hydratase domain containing 1, transcript variant 1
97. CABZ01086354.1 CABZ01086354.1 22 1 - - - - - 1.000 - - -
98. CIR1 ENSDARG00000099733 66 1 - 1.000 - - - - - - - corepressor interacting with RBPJ, 1 [Source:HGNC Symbol;Acc:HGNC:24217]
99. RAPGEF4 ENSDARG00000079872 82 1 - 1.000 - - - - - - - Rap guanine nucleotide exchange factor (GEF) 4 [Source:ZFIN;Acc:ZDB-GENE-070912-385]
100. MFAP4_3 MFAP4_3 7 1 - 1.000 - - - - - - -

There are 1283 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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