Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for dlx1a

Gene Name Gene ID Reads Annotation
dlx1a ENSDARG00000013125 142 distal-less homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-990415-48]










Genes with expression patterns similar to dlx1a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. dlx1a ENSDARG00000013125 142 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 distal-less homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-990415-48]
2. si:dkey-235h8.1 si:dkey-235h8.1 2457 3.024 - - 0.817 - 0.763 - - 0.742 0.702
3. foxg1a ENSDARG00000070769 928 2.593 - - 0.948 - 0.915 - - - 0.730 forkhead box G1a [Source:ZFIN;Acc:ZDB-GENE-990415-267]
4. fezf2 ENSDARG00000070677 224 2.557 - - 0.868 - 0.932 - - - 0.757 FEZ family zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-001103-3]
5. fezf1 ENSDARG00000010270 379 2.551 - - 0.910 0.741 0.900 - - - - FEZ family zinc finger 1 [Source:ZFIN;Acc:ZDB-GENE-060929-970]
6. BX324132.5 BX324132.5 115 2.494 - - 0.762 - 0.945 - - 0.787 -
7. zgc:171531 zgc:171531 77 2.418 - - 0.789 0.755 0.874 - - - -
8. RPUSD2 ENSDARG00000060992 107 2.379 0.735 0.739 - - - 0.905 - - - RNA pseudouridylate synthase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-120411-43]
9. sprn2 ENSDARG00000057665, ENSDARG00000115640 69 2.356 - - 0.817 0.784 - - - 0.755 - shadow of prion protein 2 [Source:ZFIN;Acc:ZDB-GENE-041221-1]
10. cnih2 ENSDARG00000043662, ENSDARG00000110467, ENSDARG00000113176 74 2.321 - - - 0.720 0.843 - - 0.758 - cornichon family AMPA receptor auxiliary protein 2 [Source:ZFIN;Acc:ZDB-GENE-050320-96]
11. tsc1a ENSDARG00000026048, ENSDARG00000113789, ENSDARG00000113892 439 2.321 0.710 0.764 - - - 0.847 - - - TSC complex subunit 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9111]
12. islr2 ENSDARG00000051875, ENSDARG00000109523 2288 2.289 - - 0.738 0.712 0.839 - - - - immunoglobulin superfamily containing leucine-rich repeat 2 [Source:ZFIN;Acc:ZDB-GENE-050320-95]
13. yif1b ENSDARG00000040505 47 1.97 - 0.977 - - - 0.993 - - - Yip1 interacting factor homolog B (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-041114-16]
14. fopnl ENSDARG00000071198 1002 1.968 - 1.000 - - - - 0.968 - - fgfr1op N-terminal like [Source:ZFIN;Acc:ZDB-GENE-101124-1]
15. si:ch211-51n3.1 si:ch211-51n3.1 26 1.955 0.955 1.000 - - - - - - -
16. cyp2k8 ENSDARG00000101190 69 1.938 - 0.984 - - - 0.954 - - - cytochrome P450, family 2, subfamily K, polypeptide 8 [Source:ZFIN;Acc:ZDB-GENE-080721-19]
17. dbh ENSDARG00000069446, ENSDARG00000114942 60 1.903 0.903 - - - - - 1.000 - - dopamine beta-hydroxylase (dopamine beta-monooxygenase) [Source:ZFIN;Acc:ZDB-GENE-990621-3]
18. EHD2 EHD2 23 1.901 - 0.978 - - - 0.923 - - -
19. ankrd16 ENSDARG00000003822, ENSDARG00000113646 64 1.867 - 0.976 - - - 0.891 - - - ankyrin repeat domain 16 [Source:ZFIN;Acc:ZDB-GENE-041210-253]
20. zgc:162161 zgc:162161 115 1.861 - 0.980 - - - - 0.881 - -
21. nr1h4 ENSDARG00000057741, ENSDARG00000113600 24 1.858 0.858 1.000 - - - - - - - nuclear receptor subfamily 1, group H, member 4 [Source:ZFIN;Acc:ZDB-GENE-040718-313]
22. CABZ01067072.1 CABZ01067072.1 17 1.858 0.858 1.000 - - - - - - -
23. loh12cr1 loh12cr1 346 1.853 - 0.913 - - - - 0.940 - -
24. si:dkey-162h11.2 si:dkey-162h11.2 257 1.853 0.858 - - - - - 0.995 - -
25. FRMPD2 ENSDARG00000074119 5 1.851 0.858 - - - - 0.993 - - - FERM and PDZ domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-110315-2]
26. nfe2l1a ENSDARG00000030616, ENSDARG00000116760 68 1.85 - 0.958 - - - - 0.892 - - nuclear factor, erythroid 2-like 1a [Source:ZFIN;Acc:ZDB-GENE-040630-5]
27. ugt2b3 46 1.848 0.858 - - - - 0.990 - - - UDP glucuronosyltransferase 2 family, polypeptide B3
28. LRIF1 LRIF1 135 1.814 0.894 - - - - - 0.920 - -
29. dcun1d4 ENSDARG00000092394 258 1.794 - 0.966 - - - - 0.828 - - DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-041014-248]
30. camk2b1 ENSDARG00000011065 79 1.782 0.796 - - - - - 0.986 - - calcium/calmodulin-dependent protein kinase (CaM kinase) II beta 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9588]
31. gabbr2 ENSDARG00000061042 122 1.782 - - - - - 0.931 0.851 - - gamma-aminobutyric acid (GABA) B receptor, 2 [Source:ZFIN;Acc:ZDB-GENE-060503-620]
32. SB:CB827 SB:CB827 245 1.779 - 0.850 - - - - 0.929 - -
33. lhx2b ENSDARG00000031222 517 1.776 - - 0.858 - 0.918 - - - - LIM homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-051220-1]
34. nr2e1 ENSDARG00000017107 340 1.772 0.858 - - - 0.914 - - - - nuclear receptor subfamily 2, group E, member 1 [Source:ZFIN;Acc:ZDB-GENE-040801-127]
35. tdrd9 ENSDARG00000013453 22 1.759 0.781 0.978 - - - - - - - tudor domain containing 9 [Source:ZFIN;Acc:ZDB-GENE-090313-193]
36. si:dkey-30j22.3 si:dkey-30j22.3 17 1.758 - 0.854 - - - 0.904 - - -
37. slc1a3b ENSDARG00000043148 431 1.758 - - 0.946 - 0.812 - - - - solute carrier family 1 (glial high affinity glutamate transporter), member 3b [Source:ZFIN;Acc:ZDB-GENE-090708-3]
38. nhsa ENSDARG00000070227 686 1.753 - - - - - 0.932 0.821 - - Nance-Horan syndrome a (congenital cataracts and dental anomalies) [Source:ZFIN;Acc:ZDB-GENE-090617-1]
39. exd3 ENSDARG00000063140 119 1.749 - 0.942 - - - - 0.807 - - exonuclease 3'-5' domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-091204-349]
40. rangrf ENSDARG00000098786 375 1.747 - 0.942 - - - 0.805 - - - RAN guanine nucleotide release factor [Source:ZFIN;Acc:ZDB-GENE-060526-143]
41. si:dkey-4c15.14 ENSDARG00000094410 107 1.742 0.781 0.961 - - - - - - - si:dkey-4c15.14 [Source:ZFIN;Acc:ZDB-GENE-050420-79]
42. chrna7 ENSDARG00000101702 50 1.734 0.858 0.876 - - - - - - - cholinergic receptor, nicotinic, alpha 7 (neuronal) [Source:ZFIN;Acc:ZDB-GENE-040108-3]
43. RFESD_2 RFESD_2 29 1.732 - - - - 0.739 0.993 - - -
44. fzd5 ENSDARG00000025420 1082 1.725 - 0.927 - - - - - - 0.798 frizzled class receptor 5 [Source:ZFIN;Acc:ZDB-GENE-990415-218]
45. doc2d ENSDARG00000079962 76 1.723 - 0.847 - - - - 0.876 - - double C2-like domains, delta [Source:ZFIN;Acc:ZDB-GENE-081104-451]
46. msmo1 ENSDARG00000055876, ENSDARG00000110767, ENSDARG00000115922 195 1.721 0.816 - - - - - 0.905 - - methylsterol monooxygenase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2670]
47. mlh3 ENSDARG00000056334 142 1.72 0.803 - - - - - 0.917 - - mutL homolog 3 (E. coli) [Source:ZFIN;Acc:ZDB-GENE-060810-45]
48. mbip ENSDARG00000019364 238 1.716 - - - - - 0.939 0.777 - - MAP3K12 binding inhibitory protein 1 [Source:ZFIN;Acc:ZDB-GENE-060810-43]
49. CABZ01081748.1 ENSDARG00000102139 31 1.707 - 0.977 - - - - - 0.730 - gastrula zinc finger protein XlCGF8.2DB-like [Source:NCBI gene;Acc:100007471]
50. celf4 ENSDARG00000070045 1537 1.706 - - 0.829 - 0.877 - - - - CUGBP, Elav-like family member 4 [Source:ZFIN;Acc:ZDB-GENE-040718-300]
51. LRRC61 ENSDARG00000077357 55 1.703 - 0.991 - - - - - - 0.712 leucine rich repeat containing 61 [Source:ZFIN;Acc:ZDB-GENE-060616-245]
52. qpctla ENSDARG00000061691 869 1.695 - - - - - 0.949 0.746 - - glutaminyl-peptide cyclotransferase-like a [Source:ZFIN;Acc:ZDB-GENE-030131-1441]
53. ralgps1 ENSDARG00000068370 39 1.693 - 0.958 - - - - - 0.735 - Ral GEF with PH domain and SH3 binding motif 1 [Source:ZFIN;Acc:ZDB-GENE-070720-16]
54. nit1 ENSDARG00000070116, ENSDARG00000113610 93 1.693 - - - - - 0.898 0.795 - - nitrilase 1 [Source:ZFIN;Acc:ZDB-GENE-040912-65]
55. zgc:152863 ENSDARG00000099969 99 1.687 - 0.892 - - - 0.795 - - - zgc:152863 [Source:ZFIN;Acc:ZDB-GENE-061103-463]
56. ZNF337_20 ZNF337_20 65 1.68 0.799 - - - - 0.881 - - -
57. ptgdsa ENSDARG00000069439, ENSDARG00000109669 289 1.678 - - - - - 0.839 0.839 - - prostaglandin D2 synthase a [Source:ZFIN;Acc:ZDB-GENE-081022-118]
58. otx1a 1607 1.674 0.858 - - - - - - 0.816 - orthodenticle homeobox 1a
59. si:dkey-189d19.2 si:dkey-189d19.2 45 1.669 0.903 0.766 - - - - - - -
60. CU638868.1 ENSDARG00000115797 487 1.668 0.799 - - - - 0.869 - - - transmembrane protein 26a [Source:NCBI gene;Acc:794507]
61. cldn11a ENSDARG00000020031 284 1.668 - - - 0.787 0.881 - - - - claudin 11a [Source:ZFIN;Acc:ZDB-GENE-040718-369]
62. CABZ01071757.1 CABZ01071757.1 108 1.662 - - - - - 0.853 0.809 - -
63. si:ch73-127k6.1 si:ch73-127k6.1 114 1.661 - 0.700 - - - - 0.961 - -
64. tex15 ENSDARG00000098929 60 1.65 - - - - - 0.729 0.921 - - testis expressed 15 [Source:ZFIN;Acc:ZDB-GENE-091204-395]
65. cxxc4 ENSDARG00000077817 197 1.642 - - 0.870 - - - - - 0.772 CXXC finger 4 [Source:ZFIN;Acc:ZDB-GENE-090313-179]
66. ITGA2 ITGA2 40 1.639 - 0.885 - - - 0.754 - - -
67. si:dkey-238o13.4 ENSDARG00000078847 884 1.635 - - - - - 0.777 - - 0.858 si:dkey-238o13.4 [Source:ZFIN;Acc:ZDB-GENE-070705-403]
68. mir199-2 mir199-2 38 1.631 - - - - 0.752 0.879 - - -
69. bbs2 ENSDARG00000041621, ENSDARG00000110124 321 1.618 0.761 0.857 - - - - - - - Bardet-Biedl syndrome 2 [Source:ZFIN;Acc:ZDB-GENE-020801-1]
70. CR628395.1 ENSDARG00000116298 75 1.608 0.858 - - - - 0.750 - - -
71. vax1 ENSDARG00000021916, ENSDARG00000114230 152 1.607 - - 0.858 0.749 - - - - - ventral anterior homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-030904-9]
72. vax2 ENSDARG00000058702 175 1.606 - - 0.848 - 0.758 - - - - ventral anterior homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-030904-8]
73. prdm1b ENSDARG00000098925 440 1.606 - - - - 0.853 - - - 0.753 PR domain containing 1b, with ZNF domain [Source:ZFIN;Acc:ZDB-GENE-080618-2]
74. pou3f2a ENSDARG00000070220 817 1.602 - - - - - - - 0.880 0.722 POU class 3 homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-980526-139]
75. ntf3 ENSDARG00000059043 355 1.589 0.796 0.793 - - - - - - - neurotrophin 3 [Source:ZFIN;Acc:ZDB-GENE-031118-66]
76. cox5b2 ENSDARG00000068738 182 1.573 0.822 0.751 - - - - - - - cytochrome c oxidase subunit 5B2 [Source:ZFIN;Acc:ZDB-GENE-060825-71]
77. si:ch211-102c2.8 ENSDARG00000093823 168 1.568 0.763 0.805 - - - - - - - si:ch211-102c2.8 [Source:ZFIN;Acc:ZDB-GENE-081104-98]
78. SBK1 SBK1 154 1.565 - 0.851 - - - - - 0.714 -
79. hmgb1a ENSDARG00000099175, ENSDARG00000114353 17231 1.562 - - - - - - - 0.805 0.757 high mobility group box 1a [Source:ZFIN;Acc:ZDB-GENE-030131-341]
80. six3a ENSDARG00000058008, ENSDARG00000114971 586 1.557 - - 0.806 0.751 - - - - - SIX homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-990415-127]
81. slc26a10 ENSDARG00000078800, ENSDARG00000114250 55 1.555 - - - - - 0.703 0.852 - - solute carrier family 26, member 10 [Source:ZFIN;Acc:ZDB-GENE-030131-9845]
82. nkx2.1b nkx2.1b 125 1.553 - - 0.719 0.834 - - - - -
83. CLINT1 CLINT1 558 1.55 - 0.823 - - - 0.727 - - -
84. nexmifb ENSDARG00000029296 416 1.546 - 0.843 - - - - - - 0.703 neurite extension and migration factor b [Source:ZFIN;Acc:ZDB-GENE-140106-18]
85. hes2.1 ENSDARG00000074897 10 1.543 - - - - - - - 0.772 0.771 hes family bHLH transcription factor 2, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-081104-104]
86. tia1 ENSDARG00000052536, ENSDARG00000114478 4392 1.538 - - - - - - - 0.790 0.748 TIA1 cytotoxic granule-associated RNA binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-1506]
87. METTL4 ENSDARG00000088999 160 1.535 - 0.742 - - - 0.793 - - - methyltransferase like 4 [Source:ZFIN;Acc:ZDB-GENE-130129-2]
88. si:ch211-202e12.3 401 1.533 - - - - - - - 0.817 0.716 si:ch211-202e12.3, transcript variant X6
89. nkx2.1a nkx2.1a 156 1.531 - - 0.807 - 0.724 - - - -
90. celf3a ENSDARG00000034668 2432 1.521 - - - - - - - 0.725 0.796 cugbp, Elav-like family member 3a [Source:ZFIN;Acc:ZDB-GENE-000501-2]
91. slc6a1a ENSDARG00000045944 260 1.521 - - 0.746 - 0.775 - - - - solute carrier family 6 (neurotransmitter transporter), member 1a [Source:ZFIN;Acc:ZDB-GENE-060519-23]
92. pmelb ENSDARG00000033760 206 1.519 - - - - 0.729 - - - 0.790 premelanosome protein b [Source:ZFIN;Acc:ZDB-GENE-050912-2]
93. myt1la ENSDARG00000008209 120 1.513 - - - - - - - 0.770 0.743 myelin transcription factor 1-like, a [Source:ZFIN;Acc:ZDB-GENE-041001-172]
94. vstm4a ENSDARG00000010154 129 1.512 - - - - - 0.720 0.792 - - V-set and transmembrane domain containing 4a [Source:ZFIN;Acc:ZDB-GENE-060810-69]
95. ATF6B 960 1.512 - - - - - 0.773 - 0.739 - activating transcription factor 6 beta
96. SAC3D1 SAC3D1 72 1.51 0.713 - - - - - 0.797 - -
97. wu:fc51f04 wu:fc51f04 7074 1.506 - - - - - - - 0.749 0.757
98. fhl3b ENSDARG00000104315 359 1.506 - 0.800 - - - - 0.706 - - four and a half LIM domains 3b [Source:ZFIN;Acc:ZDB-GENE-030131-8356]
99. six3b ENSDARG00000054879 2416 1.504 - - - 0.730 - - - - 0.774 SIX homeobox 3b [Source:ZFIN;Acc:ZDB-GENE-990415-128]
100. otx2 766 1.501 - - - - - - - 0.757 0.744 orthodenticle homeobox 2, transcript variant X2

There are 1524 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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