Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for dkk3b

Gene Name Gene ID Reads Annotation
dkk3b ENSDARG00000070683 209 dickkopf WNT signaling pathway inhibitor 3b [Source:ZFIN;Acc:ZDB-GENE-061207-74]










Genes with expression patterns similar to dkk3b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. dkk3b ENSDARG00000070683 209 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 dickkopf WNT signaling pathway inhibitor 3b [Source:ZFIN;Acc:ZDB-GENE-061207-74]
2. msxa msxa 263 1.811 - - - - - 0.918 - 0.893 -
3. CTIF ENSDARG00000090617 270 1.805 - - - - - 0.813 - - 0.992 CBP80/20-dependent translation initiation factor [Source:ZFIN;Acc:ZDB-GENE-130530-1003]
4. ltc4s ENSDARG00000062598 138 1.798 - - - - - - - 0.808 0.990 leukotriene C4 synthase [Source:ZFIN;Acc:ZDB-GENE-110411-32]
5. PLCXD1_1 PLCXD1_1 317 1.778 - - - - - 0.893 - 0.885 -
6. ctnnal1 ENSDARG00000018162 747 1.768 - - - - - 0.796 - - 0.972 catenin (cadherin-associated protein), alpha-like 1 [Source:ZFIN;Acc:ZDB-GENE-060503-507]
7. sptlc1 ENSDARG00000042995, ENSDARG00000112519 1291 1.753 - - - - - - - 0.831 0.922 serine palmitoyltransferase, long chain base subunit 1 [Source:ZFIN;Acc:ZDB-GENE-050522-61]
8. dlx6a ENSDARG00000042291 185 1.749 - - - - - 0.880 - 0.869 - distal-less homeobox 6a [Source:ZFIN;Acc:ZDB-GENE-980526-448]
9. rbm34 ENSDARG00000101877 1573 1.743 - - - - - - 0.788 - 0.955 RNA binding motif protein 34 [Source:ZFIN;Acc:ZDB-GENE-040718-77]
10. dhrs13a.2 ENSDARG00000111240 491 1.74 - - - - - - - 0.771 0.969 dehydrogenase/reductase (SDR family) member 13a, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-040912-69]
11. pif1 ENSDARG00000020289 216 1.73 - - - - - - 0.747 - 0.983 PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-4928]
12. rcbtb1 ENSDARG00000036645 255 1.716 - - - - - 0.732 - - 0.984 regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7951]
13. ZFAT ENSDARG00000077987 205 1.705 - - - - - 0.715 - - 0.990 zinc finger and AT hook domain containing [Source:ZFIN;Acc:ZDB-GENE-130204-2]
14. FAM3D ENSDARG00000091625 1392 1.697 - - - - - 0.761 - - 0.936 family with sequence similarity 3 member D [Source:HGNC Symbol;Acc:HGNC:18665]
15. CT025771.1 ENSDARG00000117721 13 1.697 - - 0.779 - - 0.918 - - -
16. eml3 ENSDARG00000058038 449 1.695 - 0.727 - - - - - - 0.968 echinoderm microtubule associated protein like 3 [Source:ZFIN;Acc:ZDB-GENE-110304-3]
17. pibf1 ENSDARG00000013006, ENSDARG00000015506 151 1.688 - 0.764 - - - 0.924 - - - progesterone immunomodulatory binding factor 1 [Source:ZFIN;Acc:ZDB-GENE-040801-94]
18. DDX47_1 DDX47_1 453 1.686 - - - - - 0.704 - - 0.982
19. spint2 ENSDARG00000069476, ENSDARG00000113265 4147 1.685 - 0.825 - - - - - 0.860 - serine peptidase inhibitor, Kunitz type, 2 [Source:ZFIN;Acc:ZDB-GENE-061013-323]
20. polr2c ENSDARG00000033596, ENSDARG00000111144, ENSDARG00000113715 1388 1.669 - - - - - - 0.790 - 0.879 polymerase (RNA) II (DNA directed) polypeptide C [Source:ZFIN;Acc:ZDB-GENE-030131-6609]
21. mrps18b ENSDARG00000007065 2121 1.651 - - - - - - 0.734 - 0.917 mitochondrial ribosomal protein S18B [Source:ZFIN;Acc:ZDB-GENE-050417-278]
22. eya3 ENSDARG00000036100 1965 1.647 - - - - - - 0.738 - 0.909 EYA transcriptional coactivator and phosphatase 3 [Source:ZFIN;Acc:ZDB-GENE-060503-864]
23. exoc1 ENSDARG00000043019 819 1.639 - - - - - 0.797 0.842 - - exocyst complex component 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1057]
24. SSTR5 ENSDARG00000101655 351 1.632 - 0.850 - - - 0.782 - - - somatostatin receptor 5 [Source:ZFIN;Acc:ZDB-GENE-040426-2502]
25. ZBTB41 ENSDARG00000054984 464 1.628 - 0.701 - - - 0.927 - - - zinc finger and BTB domain containing 41 [Source:ZFIN;Acc:ZDB-GENE-130530-649]
26. trim25l ENSDARG00000020863 292 1.626 - - - - - 0.919 - - 0.707 tripartite motif containing 25, like [Source:ZFIN;Acc:ZDB-GENE-040914-87]
27. SMIM22 ENSDARG00000105068 246 1.617 - 0.738 - - - - - 0.879 - small integral membrane protein 22 [Source:HGNC Symbol;Acc:HGNC:48329]
28. ppt2 ENSDARG00000104542 888 1.605 - - - - - - 0.710 - 0.895 palmitoyl-protein thioesterase 2 [Source:ZFIN;Acc:ZDB-GENE-010430-4]
29. haao ENSDARG00000076487 143 1.605 - - - - - 0.811 - 0.794 - 3-hydroxyanthranilate 3,4-dioxygenase [Source:ZFIN;Acc:ZDB-GENE-041114-89]
30. soga1 ENSDARG00000063075 1066 1.603 - - - - - 0.726 - - 0.877 suppressor of glucose, autophagy associated 1 [Source:ZFIN;Acc:ZDB-GENE-090313-188]
31. gstal gstal 1865 1.595 - - - - - 0.729 - - 0.866
32. casp6l1 ENSDARG00000025608, ENSDARG00000117004 107 1.591 - - - - 0.756 0.835 - - - caspase 6, apoptosis-related cysteine peptidase, like 1 [Source:ZFIN;Acc:ZDB-GENE-041010-48]
33. nrp2b ENSDARG00000038446 783 1.584 - - - - - 0.826 0.758 - - neuropilin 2b [Source:ZFIN;Acc:ZDB-GENE-040611-3]
34. hdac4 ENSDARG00000098349 1370 1.575 - 0.713 - - - - - - 0.862 histone deacetylase 4 [Source:ZFIN;Acc:ZDB-GENE-061013-95]
35. tmem248 ENSDARG00000018825 1560 1.572 - 0.715 - - - - - - 0.857 transmembrane protein 248 [Source:ZFIN;Acc:ZDB-GENE-050320-103]
36. cry1a cry1a 738 1.568 - - - - - 0.767 - 0.801 -
37. pygl ENSDARG00000002197 192 1.56 - - - - - 0.748 - 0.812 - phosphorylase, glycogen, liver [Source:ZFIN;Acc:ZDB-GENE-041205-1]
38. SLC46A3 ENSDARG00000077313 162 1.558 - 0.741 - - - 0.817 - - - solute carrier family 46, member 3 [Source:ZFIN;Acc:ZDB-GENE-100105-2]
39. si:dkey-3d18.4 si:dkey-3d18.4 43 1.552 - - - - 0.756 0.796 - - -
40. DIP2C DIP2C 222 1.54 - - - - - 0.823 - 0.717 -
41. sepw1 17630 1.534 - 0.718 - - - - - 0.816 - selenoprotein W, 1
42. tfap2a ENSDARG00000059279 3741 1.529 - 0.770 - - - 0.759 - - - transcription factor AP-2 alpha [Source:ZFIN;Acc:ZDB-GENE-011212-6]
43. haus6 ENSDARG00000101652 336 1.511 - 0.761 - - - - 0.750 - - HAUS augmin-like complex, subunit 6 [Source:ZFIN;Acc:ZDB-GENE-030131-5517]
44. pop4 ENSDARG00000101472, ENSDARG00000112497 749 1.504 - 0.724 - - - - - 0.780 - POP4 homolog, ribonuclease P/MRP subunit [Source:ZFIN;Acc:ZDB-GENE-050522-505]
45. zbtb17 ENSDARG00000074548 661 1.504 - - - - - 0.796 - 0.708 - zinc finger and BTB domain containing 17 [Source:ZFIN;Acc:ZDB-GENE-090313-240]
46. itm2ba ENSDARG00000007098 5686 1.504 - 0.732 - - - - - - 0.772 integral membrane protein 2Ba [Source:ZFIN;Acc:ZDB-GENE-030131-2352]
47. ampd3b ENSDARG00000032469, ENSDARG00000117191 350 1.499 - 0.729 - - - 0.770 - - - adenosine monophosphate deaminase 3b [Source:ZFIN;Acc:ZDB-GENE-030131-5929]
48. serpinb1l3 ENSDARG00000014556 378 1.485 - 0.710 - - - - - 0.775 - serpin peptidase inhibitor, clade B (ovalbumin), member 1, like 3 [Source:ZFIN;Acc:ZDB-GENE-030131-7059]
49. ranbp9 ENSDARG00000061048 2687 1.483 - - - - - - 0.708 - 0.775 RAN binding protein 9 [Source:ZFIN;Acc:ZDB-GENE-021030-5]
50. fam63a 381 1.472 - 0.721 - - - 0.751 - - - family with sequence similarity 63, member A, transcript variant X1
51. pcmtd2 ENSDARG00000053820, ENSDARG00000113456 59 1.47 - 0.745 - - 0.725 - - - - protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060312-14]
52. CR388015.1 CR388015.1 311 1.469 - 0.768 - - - 0.701 - - -
53. acaca ENSDARG00000078512, ENSDARG00000114071 386 1.464 - 0.739 - - - - 0.725 - - acetyl-CoA carboxylase alpha [Source:ZFIN;Acc:ZDB-GENE-060526-74]
54. tmem2 2572 1.437 - 0.705 - - - - - - 0.732 transmembrane protein 2, transcript variant X1
55. mon1a ENSDARG00000078585 554 1.433 - 0.707 - - - 0.726 - - - MON1 secretory trafficking family member A [Source:ZFIN;Acc:ZDB-GENE-070615-6]
56. zgc:173480 171 0.994 - - - - - - - - 0.994 zgc:173480
57. rxrgb ENSDARG00000004697 332 0.994 - - - - - - - - 0.994 retinoid X receptor, gamma b [Source:ZFIN;Acc:ZDB-GENE-040718-34]
58. nupl2 ENSDARG00000029043 105 0.993 - - - - - - - - 0.993 nucleoporin like 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2292]
59. ZNFX1 ENSDARG00000100280 118 0.993 - - - - - - - - 0.993 zinc finger, NFX1-type containing 1 [Source:ZFIN;Acc:ZDB-GENE-110804-2]
60. abcg1 ENSDARG00000063475 97 0.993 - - - - - - - - 0.993 ATP-binding cassette, sub-family G (WHITE), member 1 [Source:ZFIN;Acc:ZDB-GENE-070424-84]
61. si:dkey-156k2.6 si:dkey-156k2.6 848 0.992 - - - - - - - - 0.992
62. CABZ01054405.1 CABZ01054405.1 115 0.992 - - - - - - - - 0.992
63. KLF8 ENSDARG00000060661 219 0.991 - - - - - - - - 0.991 Kruppel-like factor 8 [Source:ZFIN;Acc:ZDB-GENE-070424-152]
64. oraov1 497 0.991 - - - - - - - - 0.991 oral cancer overexpressed 1
65. rab11fip3 ENSDARG00000016490 661 0.991 - - - - - - - - 0.991 RAB11 family interacting protein 3 (class II) [Source:ZFIN;Acc:ZDB-GENE-040724-138]
66. slc25a43 ENSDARG00000102048 489 0.991 - - - - - - - - 0.991 solute carrier family 25, member 43 [Source:ZFIN;Acc:ZDB-GENE-030616-69]
67. flrt1a 107 0.991 - - - - - - - - 0.991 fibronectin leucine rich transmembrane protein 1a, transcript variant X2
68. SNAP91 ENSDARG00000098809 556 0.991 - - - - - - - - 0.991 synaptosomal-associated protein 91 [Source:ZFIN;Acc:ZDB-GENE-100422-6]
69. PRDM12 PRDM12 133 0.99 - - - - - - - - 0.990
70. AKAP12 AKAP12 140 0.99 - - - - - - - - 0.990
71. RABEPK ENSDARG00000112165 112 0.989 - - - - - - - - 0.989 Rab9 effector protein with kelch motifs [Source:ZFIN;Acc:ZDB-GENE-040704-52]
72. ttc21b ENSDARG00000012368 229 0.989 - - - - - - - - 0.989 tetratricopeptide repeat domain 21B [Source:ZFIN;Acc:ZDB-GENE-031010-34]
73. WAPAL_1 WAPAL_1 205 0.988 - - - - - - - - 0.988
74. AL929322.1 AL929322.1 300 0.988 - - - - - - - - 0.988
75. slc6a6a ENSDARG00000012534 183 0.988 - - - - - - - - 0.988 solute carrier family 6 (neurotransmitter transporter), member 6a [Source:ZFIN;Acc:ZDB-GENE-081104-1]
76. rnf121 ENSDARG00000060282 1809 0.987 - - - - - - - - 0.987 ring finger protein 121 [Source:ZFIN;Acc:ZDB-GENE-050809-3]
77. ube3d ENSDARG00000026178 244 0.987 - - - - - - - - 0.987 ubiquitin protein ligase E3D [Source:ZFIN;Acc:ZDB-GENE-091218-3]
78. gpr143 ENSDARG00000034572 559 0.987 - - - - - - - - 0.987 G protein-coupled receptor 143 [Source:ZFIN;Acc:ZDB-GENE-040426-1476]
79. ptprk ENSDARG00000063416 742 0.986 - - - - - - - - 0.986 protein tyrosine phosphatase, receptor type, K [Source:ZFIN;Acc:ZDB-GENE-030131-9834]
80. CR678040.1 CR678040.1 117 0.986 - - - - - - - - 0.986
81. ptn ENSDARG00000102340 229 0.986 - - - - - - - - 0.986 pleiotrophin [Source:ZFIN;Acc:ZDB-GENE-030624-1]
82. nrxn3b ENSDARG00000062693 192 0.986 - - - - - - - - 0.986 neurexin 3b [Source:ZFIN;Acc:ZDB-GENE-070206-10]
83. wnt2bb ENSDARG00000032234, ENSDARG00000110703 273 0.986 - - - - - - - - 0.986 wingless-type MMTV integration site family, member 2Bb [Source:ZFIN;Acc:ZDB-GENE-060824-6]
84. CR376785.2 CR376785.2 175 0.985 - - - - - - - - 0.985
85. CEP152 ENSDARG00000075725 391 0.985 - - - - - - - - 0.985 centrosomal protein 152 [Source:ZFIN;Acc:ZDB-GENE-111005-1]
86. hprt1l ENSDARG00000014866 696 0.985 - - - - - - - - 0.985 hypoxanthine phosphoribosyltransferase 1, like [Source:ZFIN;Acc:ZDB-GENE-040625-17]
87. ror1 ENSDARG00000015176 378 0.985 - - - - - - - - 0.985 receptor tyrosine kinase-like orphan receptor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6104]
88. si:ch211-133l11.10 ENSDARG00000005626 381 0.985 - - - - - - - - 0.985 si:ch211-133l11.10 [Source:ZFIN;Acc:ZDB-GENE-141219-14]
89. prmt6 ENSDARG00000069706 484 0.985 - - - - - - - - 0.985 protein arginine methyltransferase 6 [Source:ZFIN;Acc:ZDB-GENE-040914-7]
90. cenpk ENSDARG00000039616 744 0.984 - - - - - - - - 0.984 centromere protein K [Source:ZFIN;Acc:ZDB-GENE-090313-204]
91. ncam2 ENSDARG00000017466 175 0.984 - - - - - - - - 0.984 neural cell adhesion molecule 2 [Source:ZFIN;Acc:ZDB-GENE-010822-1]
92. nol8 ENSDARG00000044143 425 0.984 - - - - - - - - 0.984 nucleolar protein 8 [Source:ZFIN;Acc:ZDB-GENE-050208-491]
93. TUBB8P7_2 TUBB8P7_2 565 0.983 - - - - - - - - 0.983
94. RFFL_1 RFFL_1 157 0.983 - - - - - - - - 0.983
95. trim16 ENSDARG00000010673 519 0.983 - - - - - - - - 0.983 tripartite motif containing 16 [Source:ZFIN;Acc:ZDB-GENE-090512-6]
96. naa25 ENSDARG00000075446 1505 0.983 - - - - - - - - 0.983 N(alpha)-acetyltransferase 25, NatB auxiliary subunit [Source:ZFIN;Acc:ZDB-GENE-041111-190]
97. dopey1 438 0.983 - - - - - - - - 0.983 dopey family member 1, transcript variant X4
98. pus7 ENSDARG00000031774 195 0.983 - - - - - - - - 0.983 pseudouridylate synthase 7 [Source:ZFIN;Acc:ZDB-GENE-060620-1]
99. sema4ab ENSDARG00000062352 409 0.983 - - - - - - - - 0.983 sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4Ab [Source:ZFIN;Acc:ZDB-GENE-060503-363]
100. TAF2 ENSDARG00000102307 1401 0.982 - - - - - - - - 0.982 TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-030131-3207]

There are 1384 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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