Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for dhx40

Gene Name Gene ID Reads Annotation
dhx40 ENSDARG00000041586 131 DEAH (Asp-Glu-Ala-His) box polypeptide 40 [Source:ZFIN;Acc:ZDB-GENE-080507-1]










Genes with expression patterns similar to dhx40

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. dhx40 ENSDARG00000041586 131 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 DEAH (Asp-Glu-Ala-His) box polypeptide 40 [Source:ZFIN;Acc:ZDB-GENE-080507-1]
2. myl2b ENSDARG00000053424 226 1.531 0.777 - - - - - 0.754 - - myosin, light chain 2b, regulatory, cardiac, slow [Source:ZFIN;Acc:ZDB-GENE-060331-137]
3. rnf152 ENSDARG00000087782 141 1.472 - - 0.712 - - 0.760 - - - ring finger protein 152 [Source:ZFIN;Acc:ZDB-GENE-050327-84]
4. npb ENSDARG00000078828 230 1.42 0.700 - - 0.720 - - - - - neuropeptide B [Source:ZFIN;Acc:ZDB-GENE-040107-40]
5. stim1b ENSDARG00000061560 146 0.975 0.975 - - - - - - - - stromal interaction molecule 1b [Source:ZFIN;Acc:ZDB-GENE-060531-4]
6. plce1 ENSDARG00000087921 44 0.938 0.938 - - - - - - - - phospholipase C, epsilon 1 [Source:ZFIN;Acc:ZDB-GENE-061212-4]
7. C19H9orf91 C19H9orf91 249 0.917 0.917 - - - - - - - -
8. slc22a7a ENSDARG00000056028 2426 0.895 0.895 - - - - - - - - solute carrier family 22 (organic anion transporter), member 7a [Source:ZFIN;Acc:ZDB-GENE-050506-52]
9. GPR17 ENSDARG00000062030 713 0.884 0.884 - - - - - - - - G protein-coupled receptor 17 [Source:ZFIN;Acc:ZDB-GENE-100922-133]
10. si:ch211-243a20.3 ENSDARG00000092240 151 0.884 0.884 - - - - - - - - si:ch211-243a20.3 [Source:ZFIN;Acc:ZDB-GENE-061207-28]
11. slc2a11b ENSDARG00000063288, ENSDARG00000113273 2478 0.873 0.873 - - - - - - - - solute carrier family 2 (facilitated glucose transporter), member 11b [Source:ZFIN;Acc:ZDB-GENE-070705-96]
12. st6galnac1.1 ENSDARG00000043814 95 0.87 0.870 - - - - - - - - ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-041014-160]
13. AHNAK2 AHNAK2 33 0.87 0.870 - - - - - - - -
14. PTS ENSDARG00000045269 2185 0.867 0.867 - - - - - - - - 6-pyruvoyltetrahydropterin synthase [Source:ZFIN;Acc:ZDB-GENE-070615-3]
15. DPEP3 DPEP3 53 0.867 - - - - 0.867 - - - -
16. and3 ENSDARG00000056873 22650 0.867 0.867 - - - - - - - - actinodin3 [Source:ZFIN;Acc:ZDB-GENE-040724-185]
17. zgc:174563_1 zgc:174563_1 146 0.862 - 0.862 - - - - - - -
18. cenpp ENSDARG00000044135 96 0.862 - 0.862 - - - - - - - centromere protein P [Source:ZFIN;Acc:ZDB-GENE-040801-74]
19. TMEM221 TMEM221 62 0.86 - - - - 0.860 - - - -
20. mms22l ENSDARG00000074691 232 0.856 - 0.856 - - - - - - - MMS22-like, DNA repair protein [Source:ZFIN;Acc:ZDB-GENE-030131-3869]
21. si:ch73-367f21.6 ENSDARG00000089953 46 0.855 0.855 - - - - - - - - si:ch73-367f21.6 [Source:ZFIN;Acc:ZDB-GENE-120214-31]
22. rhoab ENSDARG00000094673 26 0.855 0.855 - - - - - - - - ras homolog gene family, member Ab [Source:ZFIN;Acc:ZDB-GENE-040322-2]
23. P2RY1 ENSDARG00000105281 45 0.855 0.855 - - - - - - - - purinergic receptor P2Y1 [Source:ZFIN;Acc:ZDB-GENE-121004-2]
24. hist2h3c ENSDARG00000094154 124 0.855 0.855 - - - - - - - - histone cluster 2, H3c [Source:ZFIN;Acc:ZDB-GENE-070424-8]
25. p2rx3b ENSDARG00000029718 105 0.853 0.853 - - - - - - - - purinergic receptor P2X, ligand-gated ion channel, 3b [Source:ZFIN;Acc:ZDB-GENE-030319-3]
26. mc1r ENSDARG00000020237 108 0.852 0.852 - - - - - - - - melanocortin 1 receptor [Source:ZFIN;Acc:ZDB-GENE-030502-1]
27. slc51a ENSDARG00000045306 33 0.848 0.848 - - - - - - - - solute carrier family 51, alpha subunit [Source:ZFIN;Acc:ZDB-GENE-040912-10]
28. tat ENSDARG00000069630, ENSDARG00000115252 169 0.848 0.848 - - - - - - - - tyrosine aminotransferase [Source:ZFIN;Acc:ZDB-GENE-030131-1144]
29. casp8 ENSDARG00000058325 210 0.845 - - - - - - 0.845 - - caspase 8, apoptosis-related cysteine peptidase [Source:ZFIN;Acc:ZDB-GENE-000713-1]
30. sesn2 ENSDARG00000070012 294 0.844 - 0.844 - - - - - - - sestrin 2 [Source:ZFIN;Acc:ZDB-GENE-070108-1]
31. fah ENSDARG00000101762 274 0.844 - 0.844 - - - - - - - fumarylacetoacetate hydrolase (fumarylacetoacetase) [Source:ZFIN;Acc:ZDB-GENE-030131-1091]
32. cuedc1a ENSDARG00000068716 232 0.841 0.841 - - - - - - - - CUE domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-061027-344]
33. rgs9b ENSDARG00000045156, ENSDARG00000111650 77 0.84 - 0.840 - - - - - - - regulator of G protein signaling 9b [Source:ZFIN;Acc:ZDB-GENE-040426-1708]
34. si:ch211-199m9.3 50 0.838 - 0.838 - - - - - - - si:ch211-199m9.3, transcript variant X3
35. heatr5a ENSDARG00000023999 278 0.837 - 0.837 - - - - - - - HEAT repeat containing 5a [Source:ZFIN;Acc:ZDB-GENE-030616-152]
36. gch2 ENSDARG00000099101 45623 0.836 0.836 - - - - - - - - GTP cyclohydrolase 2 [Source:ZFIN;Acc:ZDB-GENE-001205-3]
37. flrt1b ENSDARG00000075597 465 0.827 - 0.827 - - - - - - - fibronectin leucine rich transmembrane protein 1b [Source:ZFIN;Acc:ZDB-GENE-080327-6]
38. tpst2 ENSDARG00000099155 196 0.827 - 0.827 - - - - - - - tyrosylprotein sulfotransferase 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1400]
39. rab38a rab38a 1094 0.826 0.826 - - - - - - - -
40. samd13 ENSDARG00000062977 331 0.826 - 0.826 - - - - - - - sterile alpha motif domain containing 13 [Source:ZFIN;Acc:ZDB-GENE-060929-676]
41. foxd1 ENSDARG00000029179 726 0.825 0.825 - - - - - - - - forkhead box D1 [Source:ZFIN;Acc:ZDB-GENE-040426-2094]
42. cyp51 ENSDARG00000042641 458 0.825 0.825 - - - - - - - - cytochrome P450, family 51 [Source:ZFIN;Acc:ZDB-GENE-040625-2]
43. irx4b ENSDARG00000036051 54 0.825 0.825 - - - - - - - - iroquois homeobox 4b [Source:ZFIN;Acc:ZDB-GENE-040712-4]
44. inpp5e ENSDARG00000103926 567 0.824 0.824 - - - - - - - - inositol polyphosphate-5-phosphatase E [Source:ZFIN;Acc:ZDB-GENE-050809-23]
45. NFAT5 NFAT5 62 0.823 - - - - - - 0.823 - -
46. lysmd3 ENSDARG00000024693 754 0.822 - - - - - - 0.822 - - LysM, putative peptidoglycan-binding, domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040625-88]
47. impdh1b ENSDARG00000029524 7472 0.821 0.821 - - - - - - - - IMP (inosine 5'-monophosphate) dehydrogenase 1b [Source:ZFIN;Acc:ZDB-GENE-030219-206]
48. olig4 ENSDARG00000052610, ENSDARG00000116678 1704 0.821 0.821 - - - - - - - - oligodendrocyte transcription factor 4 [Source:ZFIN;Acc:ZDB-GENE-030131-3580]
49. vasna ENSDARG00000099266, ENSDARG00000111629 488 0.82 - 0.820 - - - - - - - vasorin a [Source:ZFIN;Acc:ZDB-GENE-050522-43]
50. CR936200.1 CR936200.1 327 0.82 0.820 - - - - - - - -
51. FBF1_1 FBF1_1 86 0.817 - - - - 0.817 - - - -
52. si:ch211-240g9.1 36 0.816 0.816 - - - - - - - - si:ch211-240g9.1
53. FP102157.1 FP102157.1 1096 0.813 - 0.813 - - - - - - -
54. sh3rf1 ENSDARG00000070470 1463 0.813 0.813 - - - - - - - - SH3 domain containing ring finger 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6288]
55. chrna2b ENSDARG00000057025 217 0.812 0.812 - - - - - - - - cholinergic receptor, nicotinic, alpha 2b (neuronal) [Source:ZFIN;Acc:ZDB-GENE-041001-99]
56. slc2a15a ENSDARG00000029894 2674 0.812 0.812 - - - - - - - - solute carrier family 2 (facilitated glucose transporter), member 15a [Source:ZFIN;Acc:ZDB-GENE-060531-109]
57. zic5 ENSDARG00000016022 1034 0.811 0.811 - - - - - - - - zic family member 5 (odd-paired homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040622-1]
58. aox3 aox3 399 0.811 0.811 - - - - - - - -
59. htr1ab ENSDARG00000057098, ENSDARG00000113207 92 0.81 0.810 - - - - - - - - 5-hydroxytryptamine (serotonin) receptor 1A b [Source:ZFIN;Acc:ZDB-GENE-090409-2]
60. olfml3a ENSDARG00000061852 139 0.808 0.808 - - - - - - - - olfactomedin-like 3a [Source:ZFIN;Acc:ZDB-GENE-060825-31]
61. nebl ENSDARG00000021200 40 0.808 0.808 - - - - - - - - nebulette [Source:ZFIN;Acc:ZDB-GENE-050320-151]
62. zgc:113102 ENSDARG00000103530, ENSDARG00000113011 86 0.808 0.808 - - - - - - - - zgc:113102 [Source:ZFIN;Acc:ZDB-GENE-050306-35]
63. bbs12 ENSDARG00000016112 38 0.808 0.808 - - - - - - - - Bardet-Biedl syndrome 12 [Source:ZFIN;Acc:ZDB-GENE-070626-3]
64. DLGAP2 DLGAP2 36 0.808 0.808 - - - - - - - -
65. GRIN2B GRIN2B 140 0.808 0.808 - - - - - - - -
66. SGOL1 450 0.808 - 0.808 - - - - - - - shugoshin-like 1 (S. pombe), transcript variant X1
67. LIX1 ENSDARG00000052154 9 0.808 0.808 - - - - - - - - limb and CNS expressed 1 [Source:ZFIN;Acc:ZDB-GENE-060526-123]
68. BX511006.2 BX511006.2 29 0.808 0.808 - - - - - - - -
69. ntng2a ENSDARG00000077367 43 0.808 0.808 - - - - - - - - netrin g2a [Source:ZFIN;Acc:ZDB-GENE-081105-186]
70. KCTD17 ENSDARG00000056050 410 0.807 - - - 0.807 - - - - - potassium channel tetramerization domain containing 17 [Source:ZFIN;Acc:ZDB-GENE-130531-80]
71. si:dkeyp-77h1.4 ENSDARG00000058248 54 0.807 0.807 - - - - - - - - si:dkeyp-77h1.4 [Source:ZFIN;Acc:ZDB-GENE-050208-18]
72. rab32a ENSDARG00000029036 2157 0.807 0.807 - - - - - - - - RAB32a, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-031006-10]
73. gpr158 gpr158 52 0.807 0.807 - - - - - - - -
74. AMBRA1 AMBRA1 382 0.806 - - - - - 0.806 - - -
75. tmem245 ENSDARG00000070455 264 0.806 - 0.806 - - - - - - - transmembrane protein 245 [Source:ZFIN;Acc:ZDB-GENE-100922-188]
76. lamc3 ENSDARG00000093572 562 0.805 - 0.805 - - - - - - - laminin, gamma 3 [Source:ZFIN;Acc:ZDB-GENE-060531-121]
77. tyms ENSDARG00000042894 3068 0.803 - - - - - 0.803 - - - thymidylate synthetase [Source:ZFIN;Acc:ZDB-GENE-040426-59]
78. gria4a ENSDARG00000037496 88 0.803 0.803 - - - - - - - - glutamate receptor, ionotropic, AMPA 4a [Source:ZFIN;Acc:ZDB-GENE-020125-7]
79. suz12a ENSDARG00000070256 2229 0.801 - 0.801 - - - - - - - SUZ12, polycomb repressive complex 2 subunit a [Source:ZFIN;Acc:ZDB-GENE-040801-36]
80. sprb ENSDARG00000058553 1694 0.8 0.800 - - - - - - - - sepiapterin reductase b [Source:ZFIN;Acc:ZDB-GENE-070719-1]
81. ARMCX3 ARMCX3 328 0.799 - - - - - - 0.799 - -
82. CPNE7 ENSDARG00000102584 95 0.798 - 0.798 - - - - - - - copine VII [Source:ZFIN;Acc:ZDB-GENE-131125-70]
83. zgc:171901 ENSDARG00000074365 129 0.796 - - - - - - 0.796 - - zgc:171901 [Source:ZFIN;Acc:ZDB-GENE-080220-13]
84. dnajc28 ENSDARG00000018181, ENSDARG00000114383 134 0.795 - 0.795 - - - - - - - DnaJ (Hsp40) homolog, subfamily C, member 28 [Source:ZFIN;Acc:ZDB-GENE-050417-130]
85. BX927290.1 BX927290.1 389 0.795 - 0.795 - - - - - - -
86. hoxb5b ENSDARG00000054030, ENSDARG00000113174 808 0.793 0.793 - - - - - - - - homeobox B5b [Source:ZFIN;Acc:ZDB-GENE-000823-6]
87. zgc:113263 ENSDARG00000045842 51 0.792 0.792 - - - - - - - - zgc:113263 [Source:ZFIN;Acc:ZDB-GENE-050306-34]
88. relnl relnl 863 0.79 - - - 0.790 - - - - -
89. ebpl ENSDARG00000036636 79 0.789 - 0.789 - - - - - - - EBP like [Source:ZFIN;Acc:ZDB-GENE-030616-542]
90. cetn2 ENSDARG00000101510 541 0.787 0.787 - - - - - - - - centrin, EF-hand protein, 2 [Source:ZFIN;Acc:ZDB-GENE-091118-94]
91. aqp3b ENSDARG00000069518 80 0.787 - 0.787 - - - - - - - aquaporin 3b [Source:ZFIN;Acc:ZDB-GENE-040724-66]
92. fxn ENSDARG00000074356 524 0.787 - - - - - 0.787 - - - frataxin [Source:ZFIN;Acc:ZDB-GENE-070209-286]
93. ponzr2 ENSDARG00000088539, ENSDARG00000113036 163 0.786 - 0.786 - - - - - - - plac8 onzin related protein 2 [Source:ZFIN;Acc:ZDB-GENE-050411-41]
94. rnf144aa ENSDARG00000020600 768 0.784 - 0.784 - - - - - - - ring finger protein 144aa [Source:ZFIN;Acc:ZDB-GENE-041001-88]
95. CU896555.1 CU896555.1 27 0.783 - - - - 0.783 - - - -
96. vti1b ENSDARG00000039270 295 0.783 - - - - - - 0.783 - - vesicle transport through interaction with t-SNAREs 1B [Source:ZFIN;Acc:ZDB-GENE-040426-1148]
97. pak6b ENSDARG00000052405 537 0.781 - - - - 0.781 - - - - p21 protein (Cdc42/Rac)-activated kinase 6b [Source:ZFIN;Acc:ZDB-GENE-041014-121]
98. kbp kbp 701 0.781 - - - - - - 0.781 - -
99. ankrd12 ENSDARG00000052419 2579 0.781 - - - - - - 0.781 - - ankyrin repeat domain 12 [Source:ZFIN;Acc:ZDB-GENE-040426-846]
100. RIMBP2_1 RIMBP2_1 57 0.779 - - - 0.779 - - - - -

There are 407 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA