Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for dhfr

Gene Name Gene ID Reads Annotation
dhfr ENSDARG00000004251 1824 dihydrofolate reductase [Source:ZFIN;Acc:ZDB-GENE-010406-5]










Genes with expression patterns similar to dhfr

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. dhfr ENSDARG00000004251 1824 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 dihydrofolate reductase [Source:ZFIN;Acc:ZDB-GENE-010406-5]
2. snrpd3l ENSDARG00000076283 7655 3.045 - - - 0.752 0.801 - 0.788 - 0.704 small nuclear ribonucleoprotein D3 polypeptide, like [Source:ZFIN;Acc:ZDB-GENE-030131-5219]
3. eif2s1a ENSDARG00000005827 5992 2.999 - - - 0.755 - - 0.795 0.709 0.740 eukaryotic translation initiation factor 2, subunit 1 alpha a [Source:ZFIN;Acc:ZDB-GENE-030131-526]
4. naa40 ENSDARG00000024109, ENSDARG00000090570 4759 2.638 - - 0.920 - 0.871 - 0.847 - - N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050417-105]
5. fen1 ENSDARG00000011404 3358 2.479 - 0.802 - - 0.938 0.739 - - - flap structure-specific endonuclease 1 [Source:ZFIN;Acc:ZDB-GENE-031112-11]
6. znf865 ENSDARG00000036698 15532 2.446 - 0.725 - - 0.928 - 0.793 - - zinc finger protein 865 [Source:ZFIN;Acc:ZDB-GENE-060503-896]
7. kdm1a ENSDARG00000060679 6152 2.297 0.703 - - - 0.877 - 0.717 - - lysine (K)-specific demethylase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-7828]
8. abcf1 ENSDARG00000031795 8635 2.259 - - - 0.802 - 0.740 0.717 - - ATP-binding cassette, sub-family F (GCN20), member 1 [Source:ZFIN;Acc:ZDB-GENE-050517-31]
9. smg7 ENSDARG00000060767 2759 2.185 - 0.740 0.742 0.703 - - - - - SMG7 nonsense mediated mRNA decay factor [Source:ZFIN;Acc:ZDB-GENE-030131-9122]
10. ylpm1 ENSDARG00000043680 7676 2.173 - - - 0.728 0.722 - 0.723 - - YLP motif containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2196]
11. si:dkeyp-44a8.2 ENSDARG00000092493 8308 2.172 - - 0.725 - - - 0.742 - 0.705 si:dkeyp-44a8.2 [Source:ZFIN;Acc:ZDB-GENE-070705-542]
12. zmynd11 ENSDARG00000057249, ENSDARG00000114501 2067 1.921 - - 0.961 - 0.960 - - - - zinc finger, MYND-type containing 11 [Source:ZFIN;Acc:ZDB-GENE-050522-301]
13. mrps33 ENSDARG00000020015 3551 1.861 - - 0.917 - 0.944 - - - - mitochondrial ribosomal protein S33 [Source:ZFIN;Acc:ZDB-GENE-040715-6]
14. G3BP2 ENSDARG00000014790 9380 1.85 - - 0.902 - 0.948 - - - - GTPase activating protein (SH3 domain) binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-070112-1972]
15. pno1 ENSDARG00000008502 4547 1.786 - - 0.883 - 0.903 - - - - partner of NOB1 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-1419]
16. UNKL ENSDARG00000037838 1086 1.731 - - - 0.782 0.949 - - - - unkempt family zinc finger-like [Source:ZFIN;Acc:ZDB-GENE-131120-196]
17. C18H12orf23 C18H12orf23 5362 1.728 - - 0.858 - 0.870 - - - -
18. FP245444.1 FP245444.1 1922 1.726 - - - 0.763 0.963 - - - -
19. lsm14ab ENSDARG00000100553 3837 1.725 - - - - 0.947 - 0.778 - - LSM14A mRNA processing body assembly factor b [Source:ZFIN;Acc:ZDB-GENE-040426-2462]
20. zic5 ENSDARG00000016022 1034 1.722 - - - 0.750 0.972 - - - - zic family member 5 (odd-paired homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040622-1]
21. wu:fc51f04 wu:fc51f04 7074 1.721 - - - 0.793 0.928 - - - -
22. cdk1 ENSDARG00000087554, ENSDARG00000110840 8297 1.719 - - 0.859 - 0.860 - - - - cyclin-dependent kinase 1 [Source:ZFIN;Acc:ZDB-GENE-010320-1]
23. sin3b ENSDARG00000062472 2025 1.718 - - - - 0.970 - - - 0.748 SIN3 transcription regulator family member B [Source:ZFIN;Acc:ZDB-GENE-030131-8264]
24. rhogc ENSDARG00000028401 2671 1.717 - - - - 0.960 - 0.757 - - ras homolog gene family, member Gc [Source:ZFIN;Acc:ZDB-GENE-030131-3402]
25. tmem88a ENSDARG00000056920 536 1.712 - - - - 0.968 - 0.744 - - transmembrane protein 88 a [Source:ZFIN;Acc:ZDB-GENE-040426-1808]
26. CR759921.2 CR759921.2 583 1.706 - - - - 0.970 - 0.736 - -
27. magoh ENSDARG00000038635, ENSDARG00000109837 2880 1.7 - - 0.962 - - - 0.738 - - mago homolog, exon junction complex subunit [Source:ZFIN;Acc:ZDB-GENE-041216-1]
28. h2afx ENSDARG00000029406 2116 1.699 - - - - 0.944 - 0.755 - - H2A histone family, member X [Source:ZFIN;Acc:ZDB-GENE-040426-987]
29. cyfip2 ENSDARG00000036375, ENSDARG00000110155, ENSDARG00000114426 2788 1.699 - - - 0.732 0.967 - - - - cytoplasmic FMR1 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080724-2]
30. ephb4a ENSDARG00000100725 1749 1.698 - - - - 0.969 - 0.729 - - eph receptor B4a [Source:ZFIN;Acc:ZDB-GENE-990415-62]
31. hexim1 ENSDARG00000036482 4317 1.698 - - - - 0.922 - 0.776 - - hexamethylene bis-acetamide inducible 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4637]
32. FAM168B ENSDARG00000101733, ENSDARG00000113953, ENSDARG00000115746 2175 1.689 - - - - 0.979 - - - 0.710 family with sequence similarity 168, member B [Source:ZFIN;Acc:ZDB-GENE-060929-180]
33. cd9b ENSDARG00000016691 15573 1.689 - - 0.820 - 0.869 - - - - CD9 molecule b [Source:ZFIN;Acc:ZDB-GENE-040426-2768]
34. gatad2ab ENSDARG00000006192 2461 1.688 - - - - 0.964 - 0.724 - - GATA zinc finger domain containing 2Ab [Source:ZFIN;Acc:ZDB-GENE-040426-2372]
35. tiprl ENSDARG00000032353 1045 1.678 - - 0.948 - - - 0.730 - - TIP41, TOR signaling pathway regulator-like (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-1611]
36. rbm15b ENSDARG00000078966, ENSDARG00000112832 1888 1.678 - - - - 0.967 - 0.711 - - RNA binding motif protein 15B [Source:ZFIN;Acc:ZDB-GENE-080204-91]
37. fbxl14a ENSDARG00000034497, ENSDARG00000110327 3132 1.674 - - - - 0.949 - 0.725 - - F-box and leucine-rich repeat protein 14a [Source:ZFIN;Acc:ZDB-GENE-030131-5920]
38. katnbl1 ENSDARG00000042522 1086 1.669 - - - - 0.968 - 0.701 - - katanin p80 subunit B-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4155]
39. ankrd12 ENSDARG00000052419 2579 1.667 - - 0.936 - - - - - 0.731 ankyrin repeat domain 12 [Source:ZFIN;Acc:ZDB-GENE-040426-846]
40. kif22 ENSDARG00000102624 3694 1.665 - - - - 0.959 - - - 0.706 kinesin family member 22 [Source:ZFIN;Acc:ZDB-GENE-080204-34]
41. ikbkg ENSDARG00000017037 1225 1.639 - - 0.935 - - 0.704 - - - inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase gamma [Source:ZFIN;Acc:ZDB-GENE-050327-68]
42. eif5b ENSDARG00000016548 3972 1.637 - - - - 0.927 - 0.710 - - eukaryotic translation initiation factor 5B [Source:ZFIN;Acc:ZDB-GENE-050208-20]
43. pip5k2 pip5k2 5743 1.637 - - - - 0.936 - 0.701 - -
44. ktn1 ENSDARG00000032802 6251 1.631 - - 0.874 - - - 0.757 - - kinectin 1 [Source:ZFIN;Acc:ZDB-GENE-030408-4]
45. txnl4a ENSDARG00000036190 2048 1.63 - - 0.916 - - - 0.714 - - thioredoxin-like 4A [Source:ZFIN;Acc:ZDB-GENE-041010-25]
46. ppm1bb ENSDARG00000011496 10196 1.618 - - 0.850 - 0.768 - - - - protein phosphatase, Mg2+/Mn2+ dependent, 1Bb [Source:ZFIN;Acc:ZDB-GENE-041114-185]
47. dr1 ENSDARG00000105098, ENSDARG00000113528 5263 1.602 - - - - 0.887 - - - 0.715 down-regulator of transcription 1 [Source:ZFIN;Acc:ZDB-GENE-061013-797]
48. her6 ENSDARG00000006514, ENSDARG00000111099 7477 1.59 - 0.759 - - 0.831 - - - - hairy-related 6 [Source:ZFIN;Acc:ZDB-GENE-980526-144]
49. nr2f1a ENSDARG00000052695 5037 1.577 - - - - 0.856 - - - 0.721 nuclear receptor subfamily 2, group F, member 1a [Source:ZFIN;Acc:ZDB-GENE-980526-115]
50. CEP250 CEP250 1175 1.576 - - - 0.836 - - 0.740 - -
51. hmgb2b ENSDARG00000053990 11519 1.557 - - 0.839 - 0.718 - - - - high mobility group box 2b [Source:ZFIN;Acc:ZDB-GENE-040912-122]
52. kpnb3 ENSDARG00000040245 7967 1.555 - - - 0.787 - 0.768 - - - karyopherin (importin) beta 3 [Source:ZFIN;Acc:ZDB-GENE-030424-2]
53. slc29a1a ENSDARG00000101289 2074 1.545 - - - 0.743 - - 0.802 - - solute carrier family 29 (equilibrative nucleoside transporter), member 1a [Source:ZFIN;Acc:ZDB-GENE-050913-138]
54. nae1 ENSDARG00000011301, ENSDARG00000111542 1505 1.531 - - - - - - 0.801 - 0.730 nedd8 activating enzyme E1 subunit 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1552]
55. eif3m ENSDARG00000013931 8117 1.525 - 0.703 - - 0.822 - - - - eukaryotic translation initiation factor 3, subunit M [Source:ZFIN;Acc:ZDB-GENE-040426-2643]
56. pcdh19 ENSDARG00000034344 2378 1.513 - - - 0.765 - - - - 0.748 protocadherin 19 [Source:ZFIN;Acc:ZDB-GENE-030131-4218]
57. ssbp4 ENSDARG00000056483 10196 1.509 - - - 0.737 - - 0.772 - - single stranded DNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-469]
58. gkap1 ENSDARG00000068123 2645 1.508 - 0.786 - - - - 0.722 - - G kinase anchoring protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2485]
59. bcl11ab ENSDARG00000063153 3032 1.489 - - - 0.751 - - - - 0.738 B cell CLL/lymphoma 11Ab [Source:ZFIN;Acc:ZDB-GENE-061009-4]
60. ezh2 ENSDARG00000010571 3273 1.477 - - - 0.736 - - - - 0.741 enhancer of zeste 2 polycomb repressive complex 2 subunit [Source:ZFIN;Acc:ZDB-GENE-041111-259]
61. yth2 yth2 3716 1.472 - - - 0.765 - - 0.707 - -
62. tcea1 ENSDARG00000003531 2912 1.471 - - - 0.734 - - - - 0.737 transcription elongation factor A (SII), 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8049]
63. dynlt1 ENSDARG00000045909 2451 1.469 0.716 - - - - - 0.753 - - dynein, light chain, Tctex-type 1 [Source:ZFIN;Acc:ZDB-GENE-041210-9]
64. snrpc ENSDARG00000009871 9567 1.455 - - - - - - 0.752 - 0.703 small nuclear ribonucleoprotein polypeptide C [Source:ZFIN;Acc:ZDB-GENE-020419-26]
65. rrm1 ENSDARG00000014017 7296 1.453 - 0.749 - 0.704 - - - - - ribonucleotide reductase M1 polypeptide [Source:ZFIN;Acc:ZDB-GENE-990415-247]
66. iars ENSDARG00000007955 1363 1.452 - 0.712 - - 0.740 - - - - isoleucyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-6325]
67. coil ENSDARG00000040070 863 1.448 - - - 0.703 - - 0.745 - - coilin p80 [Source:ZFIN;Acc:ZDB-GENE-000330-8]
68. ppan ENSDARG00000022232 983 1.446 - 0.716 - - - - 0.730 - - peter pan homolog (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030114-4]
69. CYTH2 ENSDARG00000028800 2349 1.439 - - - 0.718 - - - - 0.721 cytohesin 2 [Source:HGNC Symbol;Acc:HGNC:9502]
70. BAZ1A ENSDARG00000063233, ENSDARG00000099745 1432 1.43 - - - 0.712 - - - - 0.718 bromodomain adjacent to zinc finger domain, 1A [Source:ZFIN;Acc:ZDB-GENE-030131-6105]
71. morf4l1 ENSDARG00000041155, ENSDARG00000111898, ENSDARG00000111981 4044 1.429 - - - 0.723 - - 0.706 - - mortality factor 4 like 1 [Source:ZFIN;Acc:ZDB-GENE-040718-348]
72. pnisr ENSDARG00000069855, ENSDARG00000116449 3465 1.424 - - - - - - 0.704 - 0.720 PNN-interacting serine/arginine-rich protein [Source:ZFIN;Acc:ZDB-GENE-030131-362]
73. plxna3 ENSDARG00000007172 1412 1.418 - 0.712 - - - - - - 0.706 plexin A3 [Source:ZFIN;Acc:ZDB-GENE-070613-1]
74. cenpe ENSDARG00000063385 4428 0.983 - - - - 0.983 - - - - centromere protein E [Source:ZFIN;Acc:ZDB-GENE-060929-860]
75. brms1la ENSDARG00000006235 2011 0.98 - - - - 0.980 - - - - BRMS1 like transcriptional repressor a [Source:ZFIN;Acc:ZDB-GENE-050913-49]
76. zgc:123105 ENSDARG00000003127 3061 0.98 - - - - 0.980 - - - - zgc:123105 [Source:ZFIN;Acc:ZDB-GENE-051113-272]
77. odz4 odz4 822 0.98 - - - - 0.980 - - - -
78. smo ENSDARG00000002952 6411 0.978 - - - - 0.978 - - - - smoothened, frizzled class receptor [Source:ZFIN;Acc:ZDB-GENE-980526-89]
79. SENP1 SENP1 1122 0.978 - - - - 0.978 - - - -
80. lmf2b ENSDARG00000025859, ENSDARG00000115591 2671 0.977 - - - - 0.977 - - - - lipase maturation factor 2b [Source:ZFIN;Acc:ZDB-GENE-070206-11]
81. ctdspl2b ENSDARG00000060586 1682 0.976 - - - - 0.976 - - - - CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2b [Source:ZFIN;Acc:ZDB-GENE-030131-1809]
82. lin54 ENSDARG00000063194 2583 0.976 - - - - 0.976 - - - - lin-54 DREAM MuvB core complex component [Source:ZFIN;Acc:ZDB-GENE-060929-440]
83. gabpa ENSDARG00000069289, ENSDARG00000110923 1536 0.975 - - - - 0.975 - - - - GA binding protein transcription factor subunit alpha [Source:ZFIN;Acc:ZDB-GENE-011010-2]
84. lgi1a ENSDARG00000020493 1218 0.975 - - - - 0.975 - - - - leucine-rich, glioma inactivated 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1731]
85. pias4a ENSDARG00000007081 4264 0.975 - - - - 0.975 - - - - protein inhibitor of activated STAT, 4a [Source:ZFIN;Acc:ZDB-GENE-040426-2734]
86. FBXO33 ENSDARG00000075400 1164 0.975 - - - - 0.975 - - - - F-box protein 33 [Source:ZFIN;Acc:ZDB-GENE-100618-2]
87. med14 ENSDARG00000009953 1383 0.975 - - - - 0.975 - - - - mediator complex subunit 14 [Source:ZFIN;Acc:ZDB-GENE-030131-8867]
88. prdm16 prdm16 1346 0.974 - - - - 0.974 - - - -
89. UBE2QL1 ENSDARG00000079276 3474 0.974 - - - - 0.974 - - - - ubiquitin-conjugating enzyme E2Q family-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8137]
90. msh2 ENSDARG00000018022, ENSDARG00000115185 1301 0.974 - - - - 0.974 - - - - mutS homolog 2 (E. coli) [Source:ZFIN;Acc:ZDB-GENE-040426-2932]
91. aspg ENSDARG00000052942 1406 0.973 - - - - 0.973 - - - - asparaginase homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-070820-14]
92. aatf ENSDARG00000025467, ENSDARG00000109548 796 0.973 - - - - 0.973 - - - - apoptosis antagonizing transcription factor [Source:ZFIN;Acc:ZDB-GENE-030131-9654]
93. plrg1 ENSDARG00000037283, ENSDARG00000110921 1552 0.973 - - - - 0.973 - - - - pleiotropic regulator 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2787]
94. ercc6 ENSDARG00000075612 1175 0.973 - - - - 0.973 - - - - excision repair cross-complementation group 6 [Source:ZFIN;Acc:ZDB-GENE-070228-1]
95. srpk1b ENSDARG00000031560 2079 0.973 - - - - 0.973 - - - - SRSF protein kinase 1b [Source:ZFIN;Acc:ZDB-GENE-070112-2292]
96. toporsb ENSDARG00000105028 1898 0.972 - - - - 0.972 - - - - topoisomerase I binding, arginine/serine-rich b [Source:ZFIN;Acc:ZDB-GENE-110728-3]
97. st8sia6 ENSDARG00000021195 2244 0.972 - - - - 0.972 - - - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6 [Source:ZFIN;Acc:ZDB-GENE-060322-9]
98. dlg3_1 ENSDARG00000076796, ENSDARG00000111101 1542 0.972 - - - - 0.972 - - - - discs, large homolog 3 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-050208-93]
99. smn1 ENSDARG00000018494 1024 0.972 - - - - 0.972 - - - - survival of motor neuron 1, telomeric [Source:ZFIN;Acc:ZDB-GENE-990715-16]
100. ccdc28b ENSDARG00000011222 528 0.972 - - - - 0.972 - - - - coiled-coil domain containing 28B [Source:ZFIN;Acc:ZDB-GENE-060208-3]

There are 1036 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA