Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for depdc5

Gene Name Gene ID Reads Annotation
depdc5 ENSDARG00000078105 745 DEP domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-091204-356]










Genes with expression patterns similar to depdc5

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. depdc5 ENSDARG00000078105 745 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 DEP domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-091204-356]
2. bmp6 ENSDARG00000015686 211 2.302 0.804 - 0.778 - - - - - 0.720 bone morphogenetic protein 6 [Source:ZFIN;Acc:ZDB-GENE-050306-42]
3. ROBO3_1 ROBO3_1 468 2.222 - - - 0.717 - 0.790 - 0.715 -
4. anapc4 ENSDARG00000032237 385 1.703 - - 0.732 - - - - 0.971 - anaphase promoting complex subunit 4 [Source:ZFIN;Acc:ZDB-GENE-041212-10]
5. pcnxl3 pcnxl3 756 1.627 - 0.801 - - - - 0.826 - -
6. lpar2a ENSDARG00000042338 285 1.626 0.899 - - - - 0.727 - - - lysophosphatidic acid receptor 2a [Source:ZFIN;Acc:ZDB-GENE-040801-97]
7. arntl1a ENSDARG00000006791 550 1.619 0.856 - 0.763 - - - - - - aryl hydrocarbon receptor nuclear translocator-like 1a [Source:ZFIN;Acc:ZDB-GENE-000509-1]
8. chrnb3a ENSDARG00000052764, ENSDARG00000112769 139 1.611 - - - 0.746 - 0.865 - - - cholinergic receptor, nicotinic, beta polypeptide 3a [Source:ZFIN;Acc:ZDB-GENE-040108-1]
9. si:dkeyp-117h8.2 ENSDARG00000011602 260 1.591 - - 0.725 0.866 - - - - - si:dkeyp-117h8.2 [Source:ZFIN;Acc:ZDB-GENE-041210-321]
10. LPHN3 LPHN3 195 1.588 0.802 - - - - 0.786 - - -
11. si:ch211-133l11.10 ENSDARG00000005626 381 1.583 - - - 0.755 - 0.828 - - - si:ch211-133l11.10 [Source:ZFIN;Acc:ZDB-GENE-141219-14]
12. uhmk1 ENSDARG00000059575 1486 1.582 - 0.774 - - - 0.808 - - - U2AF homology motif (UHM) kinase 1 [Source:ZFIN;Acc:ZDB-GENE-060929-1014]
13. ift57 ENSDARG00000021022 288 1.578 - - - 0.746 - 0.832 - - - intraflagellar transport 57 homolog (Chlamydomonas) [Source:ZFIN;Acc:ZDB-GENE-040614-1]
14. senp6a ENSDARG00000102923 908 1.577 0.733 - - - - 0.844 - - - SUMO specific peptidase 6a [Source:ZFIN;Acc:ZDB-GENE-080204-25]
15. rgs9b ENSDARG00000045156, ENSDARG00000111650 77 1.576 0.799 - - - - 0.777 - - - regulator of G protein signaling 9b [Source:ZFIN;Acc:ZDB-GENE-040426-1708]
16. UBL7 UBL7 197 1.574 0.801 - - - - 0.773 - - -
17. scpp5 ENSDARG00000078622 15 1.561 0.799 - - - - 0.762 - - - secretory calcium-binding phosphoprotein 5 [Source:ZFIN;Acc:ZDB-GENE-090313-256]
18. CU855694.1 ENSDARG00000098513 402 1.553 0.849 - - 0.704 - - - - -
19. MCOLN3_1 MCOLN3_1 192 1.551 0.783 - 0.768 - - - - - -
20. fem1b ENSDARG00000062636 474 1.547 - 0.720 - - - 0.827 - - - fem-1 homolog b (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-071009-3]
21. BX649494.1 BX649494.1 195 1.535 - - 0.763 - - 0.772 - - -
22. si:ch211-214b16.4 ENSDARG00000074345 261 1.532 - - - - - 0.817 - 0.715 - si:ch211-214b16.4 [Source:ZFIN;Acc:ZDB-GENE-081105-53]
23. appb ENSDARG00000055543, ENSDARG00000109552 4461 1.53 - 0.728 - - - 0.802 - - - amyloid beta (A4) precursor protein b [Source:ZFIN;Acc:ZDB-GENE-020220-1]
24. slc30a10 ENSDARG00000103983 46 1.53 0.802 - - - - 0.728 - - - solute carrier family 30, member 10 [Source:ZFIN;Acc:ZDB-GENE-060608-2]
25. dctn5 ENSDARG00000003573 1100 1.528 - 0.700 - - - 0.828 - - - dynactin 5 [Source:ZFIN;Acc:ZDB-GENE-040718-201]
26. C9H2orf69 C9H2orf69 148 1.512 - - - - - 0.801 - 0.711 -
27. cpz ENSDARG00000075521 2356 1.511 - - 0.756 0.755 - - - - - carboxypeptidase Z [Source:ZFIN;Acc:ZDB-GENE-090313-267]
28. si:dkey-19a16.4 ENSDARG00000071657 190 1.51 0.759 - - - - 0.751 - - - si:dkey-19a16.4 [Source:ZFIN;Acc:ZDB-GENE-050208-652]
29. nfybb ENSDARG00000045611, ENSDARG00000110926 350 1.504 - - - 0.759 - 0.745 - - - nuclear transcription factor Y, beta b [Source:ZFIN;Acc:ZDB-GENE-050306-25]
30. arhgef7b ENSDARG00000073848 1249 1.502 - 0.713 - - - - 0.789 - - Rho guanine nucleotide exchange factor (GEF) 7b [Source:ZFIN;Acc:ZDB-GENE-041212-49]
31. psenen ENSDARG00000068698 2777 1.5 - 0.767 - - - - 0.733 - - presenilin enhancer, gamma-secretase subunit [Source:ZFIN;Acc:ZDB-GENE-040218-1]
32. pdcd2l ENSDARG00000002754 417 1.499 - - 0.757 - - 0.742 - - - programmed cell death 2-like [Source:ZFIN;Acc:ZDB-GENE-040426-967]
33. arhgap25 ENSDARG00000061784 112 1.491 - - 0.734 0.757 - - - - - Rho GTPase activating protein 25 [Source:ZFIN;Acc:ZDB-GENE-060526-210]
34. sult1st1 ENSDARG00000028275 806 1.49 - - 0.789 0.701 - - - - - sulfotransferase family 1, cytosolic sulfotransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2144]
35. atp1b4 ENSDARG00000053262 1337 1.49 - - - - - 0.766 - 0.724 - ATPase Na+/K+ transporting subunit beta 4 [Source:ZFIN;Acc:ZDB-GENE-070412-1]
36. HELZ2_1 ENSDARG00000012600 53 1.479 - - - 0.742 - 0.737 - - - helicase with zinc finger 2 [Source:HGNC Symbol;Acc:HGNC:30021]
37. FP102801.1_1 FP102801.1_1 238 1.478 - - - - - 0.760 - 0.718 -
38. tmub2 ENSDARG00000056467, ENSDARG00000109925 100 1.473 - - - 0.750 - - - 0.723 - transmembrane and ubiquitin-like domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-030616-254]
39. si:ch211-191j22.3 ENSDARG00000095459 959 1.465 - 0.714 - - - - 0.751 - - si:ch211-191j22.3 [Source:ZFIN;Acc:ZDB-GENE-030131-4242]
40. ADCYAP1R1 ADCYAP1R1 118 1.462 - - - - - 0.746 - 0.716 -
41. pgam5 ENSDARG00000035608 4044 1.462 - - - - - 0.727 0.735 - - PGAM family member 5, serine/threonine protein phosphatase, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-030131-683]
42. memo1 ENSDARG00000010823 1681 1.458 - - - 0.756 - 0.702 - - - mediator of cell motility 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5571]
43. EHBP1 ENSDARG00000043643 966 1.456 - 0.710 - - - 0.746 - - - EH domain binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-091006-4]
44. tmem57b 871 1.448 - - - - - 0.741 0.707 - - transmembrane protein 57b, transcript variant X2
45. atg4c ENSDARG00000044373 979 1.445 - 0.730 - - - 0.715 - - - autophagy related 4C, cysteine peptidase [Source:ZFIN;Acc:ZDB-GENE-040625-84]
46. metrn ENSDARG00000030367, ENSDARG00000112407, ENSDARG00000115842 7032 1.444 - 0.724 - - - 0.720 - - - meteorin, glial cell differentiation regulator [Source:ZFIN;Acc:ZDB-GENE-050102-1]
47. npffr1l2 ENSDARG00000062631 127 1.434 - - 0.704 - - 0.730 - - - neuropeptide FF receptor 1 like 2 [Source:ZFIN;Acc:ZDB-GENE-060526-110]
48. plekhg6 ENSDARG00000086056 368 1.431 - - 0.720 - - 0.711 - - - pleckstrin homology domain containing, family G (with RhoGef domain) member 6 [Source:ZFIN;Acc:ZDB-GENE-030131-2517]
49. fbxo42 ENSDARG00000087545 262 1.419 0.703 - - - - - 0.716 - - F-box protein 42 [Source:ZFIN;Acc:ZDB-GENE-030131-7399]
50. gclm ENSDARG00000018953 1712 1.419 - 0.710 - - - - 0.709 - - glutamate-cysteine ligase, modifier subunit [Source:ZFIN;Acc:ZDB-GENE-030131-5906]
51. chmp3 ENSDARG00000038064 577 1.413 - - 0.708 - - 0.705 - - - charged multivesicular body protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2600]
52. srfbp1 ENSDARG00000075323 2262 1.411 0.705 - - 0.706 - - - - - serum response factor binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1991]
53. si:dkey-162h11.3 41 0.945 0.945 - - - - - - - - si:dkey-162h11.3, transcript variant X2
54. BX470211.1 ENSDARG00000105629 111 0.945 0.945 - - - - - - - -
55. fbxo7 ENSDARG00000099833 304 0.943 0.943 - - - - - - - - F-box protein 7 [Source:ZFIN;Acc:ZDB-GENE-050913-68]
56. MSR1 MSR1 449 0.934 0.934 - - - - - - - -
57. tbc1d32 ENSDARG00000041734 486 0.932 0.932 - - - - - - - - TBC1 domain family, member 32 [Source:ZFIN;Acc:ZDB-GENE-061106-5]
58. MYO5A MYO5A 595 0.924 - - - - - - - 0.924 -
59. sfrp1b ENSDARG00000057678, ENSDARG00000115373 95 0.923 0.923 - - - - - - - - secreted frizzled-related protein 1b [Source:ZFIN;Acc:ZDB-GENE-061103-1]
60. polr2m ENSDARG00000074968, ENSDARG00000113507 352 0.91 0.910 - - - - - - - - RNA polymerase II subunit M [Source:ZFIN;Acc:ZDB-GENE-160728-95]
61. RAB43 ENSDARG00000059404 170 0.909 0.909 - - - - - - - - RAB43, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-060825-25]
62. galnt2 ENSDARG00000003829 891 0.907 - 0.907 - - - - - - - UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-041111-110]
63. st5 ENSDARG00000037363, ENSDARG00000112276 1797 0.905 - - - - - - - 0.905 - suppression of tumorigenicity 5 [Source:ZFIN;Acc:ZDB-GENE-030131-2547]
64. ms4a17a.14 829 0.904 - - - - - - - 0.904 - membrane-spanning 4-domains, subfamily A, member 17A.14
65. CABZ01085085.1 CABZ01085085.1 123 0.904 0.904 - - - - - - - -
66. gro2 gro2 1404 0.9 - - - - - - - 0.900 -
67. CT573152.3 CT573152.3 206 0.899 0.899 - - - - - - - -
68. CABZ01007930.1 CABZ01007930.1 977 0.894 - - - - - - - 0.894 -
69. nfyba ENSDARG00000039185 1804 0.891 - - - - - 0.891 - - - nuclear transcription factor Y, beta a [Source:ZFIN;Acc:ZDB-GENE-050417-13]
70. trim2b ENSDARG00000076174 250 0.891 - - - - - 0.891 - - - tripartite motif containing 2b [Source:ZFIN;Acc:ZDB-GENE-090312-70]
71. BX470131.1 BX470131.1 86 0.891 - - - - - 0.891 - - -
72. hoxb7a ENSDARG00000056030 1212 0.886 - - - - - 0.886 - - - homeobox B7a [Source:ZFIN;Acc:ZDB-GENE-000329-2]
73. pknox1.1 ENSDARG00000018765 2149 0.885 - - - - - 0.885 - - - pbx/knotted 1 homeobox 1.1 [Source:ZFIN;Acc:ZDB-GENE-020122-5]
74. TTF2 ENSDARG00000104105 564 0.884 0.884 - - - - - - - - transcription termination factor, RNA polymerase II [Source:ZFIN;Acc:ZDB-GENE-110411-73]
75. anxa13l ENSDARG00000013613 631 0.88 - - - - - 0.880 - - - annexin A13, like [Source:ZFIN;Acc:ZDB-GENE-050522-310]
76. SLC27A2 SLC27A2 436 0.88 0.880 - - - - - - - -
77. jagn1a ENSDARG00000041071, ENSDARG00000109427 397 0.88 - - - - - 0.880 - - - jagunal homolog 1a [Source:ZFIN;Acc:ZDB-GENE-041010-80]
78. srpk1b ENSDARG00000031560 2079 0.878 - - - - - 0.878 - - - SRSF protein kinase 1b [Source:ZFIN;Acc:ZDB-GENE-070112-2292]
79. MAP6 MAP6 643 0.878 - - - - - 0.878 - - -
80. si:dkey-82i20.5 ENSDARG00000116717 2965 0.877 - - - - - - - 0.877 - si:dkey-82i20.5 [Source:ZFIN;Acc:ZDB-GENE-110914-101]
81. zdhhc16a ENSDARG00000007808 1080 0.877 - - - - - - 0.877 - - zinc finger, DHHC-type containing 16a [Source:ZFIN;Acc:ZDB-GENE-040426-1621]
82. fam13b ENSDARG00000076779 1130 0.877 - - - - - - - 0.877 - family with sequence similarity 13, member B [Source:ZFIN;Acc:ZDB-GENE-030131-4913]
83. kctd16a ENSDARG00000004648, ENSDARG00000114292, ENSDARG00000117199 80 0.875 - - - - - 0.875 - - - potassium channel tetramerization domain containing 16a [Source:ZFIN;Acc:ZDB-GENE-060117-1]
84. TESK1 TESK1 109 0.874 - - - - - 0.874 - - -
85. STARD5 ENSDARG00000076117 251 0.874 0.874 - - - - - - - - StAR-related lipid transfer (START) domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-130103-4]
86. rgs3a ENSDARG00000099746 727 0.873 - - - - - 0.873 - - - regulator of G protein signaling 3a [Source:ZFIN;Acc:ZDB-GENE-040801-150]
87. rims1a ENSDARG00000074680 143 0.873 - - - - - 0.873 - - - regulating synaptic membrane exocytosis 1a [Source:ZFIN;Acc:ZDB-GENE-090312-135]
88. mkrn4 ENSDARG00000028295 2768 0.87 - - - - - 0.870 - - - makorin, ring finger protein, 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5954]
89. invs ENSDARG00000002213 261 0.869 0.869 - - - - - - - - inversin [Source:ZFIN;Acc:ZDB-GENE-020507-2]
90. si:dkey-79f11.1 si:dkey-79f11.1 91 0.869 - - - - - 0.869 - - -
91. atoh8 ENSDARG00000037555, ENSDARG00000110248 2059 0.869 - - - - - - - 0.869 - atonal bHLH transcription factor 8 [Source:ZFIN;Acc:ZDB-GENE-061215-7]
92. NMNAT3 ENSDARG00000077034 126 0.868 0.868 - - - - - - - - nicotinamide nucleotide adenylyltransferase 3 [Source:HGNC Symbol;Acc:HGNC:20989]
93. rad21b ENSDARG00000035655 87 0.867 - - - - - 0.867 - - - RAD21 cohesin complex component b [Source:ZFIN;Acc:ZDB-GENE-060503-223]
94. plk1 ENSDARG00000058471, ENSDARG00000111745 7020 0.867 - - - - - 0.867 - - - polo-like kinase 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-021115-7]
95. tcf19l ENSDARG00000040036 369 0.865 - - - 0.865 - - - - - transcription factor 19 (SC1), like [Source:ZFIN;Acc:ZDB-GENE-060324-2]
96. gabrb3 ENSDARG00000023771, ENSDARG00000114822 180 0.864 - - - - - 0.864 - - - gamma-aminobutyric acid (GABA) A receptor, beta 3 [Source:ZFIN;Acc:ZDB-GENE-101102-2]
97. asnsd1 830 0.864 - - - - - 0.864 - - - asparagine synthetase domain containing 1, transcript variant X1
98. nrsn1 ENSDARG00000111235 123 0.863 - - - - - 0.863 - - - neurensin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7491]
99. ndst3 ENSDARG00000041776 605 0.862 - - - - - 0.862 - - - N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3 [Source:ZFIN;Acc:ZDB-GENE-090312-199]
100. VSTM2B VSTM2B 149 0.862 - - - - - 0.862 - - -

There are 1741 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA