Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for denr

Gene Name Gene ID Reads Annotation
denr ENSDARG00000037229 8370 density-regulated protein [Source:ZFIN;Acc:ZDB-GENE-040718-450]










Genes with expression patterns similar to denr

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. denr ENSDARG00000037229 8370 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 density-regulated protein [Source:ZFIN;Acc:ZDB-GENE-040718-450]
2. ppp1cab ENSDARG00000071566 4350 2.641 0.876 - - - 0.938 - 0.827 - - protein phosphatase 1, catalytic subunit, alpha isozyme b [Source:ZFIN;Acc:ZDB-GENE-030131-5512]
3. cox6c ENSDARG00000038577 16845 2.623 - 0.940 0.808 - - - 0.875 - - cytochrome c oxidase subunit 6C [Source:ZFIN;Acc:ZDB-GENE-040724-95]
4. cltcb ENSDARG00000090716 5544 2.583 0.905 - - - 0.938 - 0.740 - - clathrin, heavy chain b (Hc) [Source:ZFIN;Acc:ZDB-GENE-050227-12]
5. snx1a ENSDARG00000071031 3975 2.522 0.859 - - - 0.930 - 0.733 - - sorting nexin 1a [Source:ZFIN;Acc:ZDB-GENE-060302-3]
6. WDR83OS ENSDARG00000025554 7117 2.52 - 0.959 - - - - 0.850 - 0.711 WD repeat domain 83 opposite strand [Source:ZFIN;Acc:ZDB-GENE-040426-1674]
7. pfn2l ENSDARG00000012682 21690 2.518 - 0.831 - - 0.817 - 0.870 - - profilin 2 like [Source:ZFIN;Acc:ZDB-GENE-030131-34]
8. tardbpl ENSDARG00000004452, ENSDARG00000116205 12160 2.46 - - - 0.751 0.942 - 0.767 - - TAR DNA binding protein, like [Source:ZFIN;Acc:ZDB-GENE-031030-1]
9. C1QBP ENSDARG00000039887 11186 2.377 - 0.896 0.747 - - - 0.734 - - complement component 1, q subcomponent binding protein [Source:ZFIN;Acc:ZDB-GENE-050417-408]
10. rpl22 ENSDARG00000070437 56743 2.365 0.743 - - - - - 0.881 - 0.741 ribosomal protein L22 [Source:ZFIN;Acc:ZDB-GENE-051113-276]
11. srsf6a ENSDARG00000013729 8576 2.346 - - - - 0.892 - 0.730 - 0.724 serine/arginine-rich splicing factor 6a [Source:ZFIN;Acc:ZDB-GENE-040426-2824]
12. sarnp ENSDARG00000059357 4768 2.305 - - 0.840 - - - 0.717 - 0.748 SAP domain containing ribonucleoprotein [Source:ZFIN;Acc:ZDB-GENE-050522-161]
13. PSIP1 PSIP1 5252 2.193 - - 0.778 - - - 0.712 - 0.703
14. slc38a5a ENSDARG00000009901 2527 1.87 - 0.964 - - 0.906 - - - - solute carrier family 38, member 5a [Source:ZFIN;Acc:ZDB-GENE-081105-92]
15. eif1axb ENSDARG00000057912, ENSDARG00000111310 26395 1.87 0.933 0.937 - - - - - - - eukaryotic translation initiation factor 1A X-linked b [Source:ZFIN;Acc:ZDB-GENE-030131-1319]
16. calr ENSDARG00000076290 13987 1.852 0.868 0.984 - - - - - - - calreticulin [Source:ZFIN;Acc:ZDB-GENE-030131-4042]
17. RNF214 RNF214 816 1.808 0.887 - - - 0.921 - - - -
18. srsf2a ENSDARG00000057484 25721 1.803 0.814 0.989 - - - - - - - serine/arginine-rich splicing factor 2a [Source:ZFIN;Acc:ZDB-GENE-040426-2706]
19. sec61a1 ENSDARG00000021669 20408 1.776 - 0.874 - - 0.902 - - - - Sec61 translocon alpha 1 subunit [Source:ZFIN;Acc:ZDB-GENE-020418-2]
20. ash2l ENSDARG00000060392 4916 1.776 - - - - 0.928 - 0.848 - - ash2 like, histone lysine methyltransferase complex subunit [Source:ZFIN;Acc:ZDB-GENE-030131-494]
21. arl6ip1 ENSDARG00000054578, ENSDARG00000112340 11714 1.774 - - - - 0.943 - 0.831 - - ADP-ribosylation factor-like 6 interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1087]
22. ythdc1 ENSDARG00000051953, ENSDARG00000114892 4752 1.769 - 0.966 0.803 - - - - - - YTH domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041114-114]
23. nop2 ENSDARG00000043304 2511 1.761 0.932 - 0.829 - - - - - - NOP2 nucleolar protein homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-050309-7]
24. C1H7orf55 C1H7orf55 2552 1.757 - 0.966 - - - - 0.791 - -
25. polr2d ENSDARG00000076509 3386 1.749 - 0.966 - - - - 0.783 - - polymerase (RNA) II (DNA directed) polypeptide D [Source:ZFIN;Acc:ZDB-GENE-040714-2]
26. myom1a ENSDARG00000061249 10230 1.748 0.910 - - - 0.838 - - - - myomesin 1a (skelemin) [Source:ZFIN;Acc:ZDB-GENE-030131-2856]
27. WDR1 ENSDARG00000114022 7532 1.747 0.790 0.957 - - - - - - - WD repeat domain 1 [Source:HGNC Symbol;Acc:HGNC:12754]
28. stxbp1a ENSDARG00000001994 5154 1.746 0.831 - - - 0.915 - - - - syntaxin binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-050626-106]
29. KDM6B KDM6B 10265 1.745 - 0.959 - - - - - - 0.786
30. rab11a ENSDARG00000041450, ENSDARG00000109465 7418 1.738 0.848 - - - 0.890 - - - - RAB11a, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-041114-53]
31. pds5b ENSDARG00000098897 1732 1.735 - - - - 0.935 - 0.800 - - PDS5 cohesin associated factor B [Source:ZFIN;Acc:ZDB-GENE-091217-2]
32. ndufa9 ndufa9 8846 1.729 - 0.961 - - - - 0.768 - -
33. Sep-02 Sep-02 10074 1.727 - - - - 0.892 - 0.835 - -
34. lsm4 ENSDARG00000023852 6083 1.727 - - 0.823 - 0.904 - - - - LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:ZFIN;Acc:ZDB-GENE-040426-1652]
35. smek1 ENSDARG00000042187 3509 1.726 - - - - 0.950 - 0.776 - - SMEK homolog 1, suppressor of mek1 (Dictyostelium) [Source:ZFIN;Acc:ZDB-GENE-030131-3958]
36. maf1 ENSDARG00000013122 3365 1.723 - - - - 0.935 - 0.788 - - MAF1 homolog, negative regulator of RNA polymerase III [Source:ZFIN;Acc:ZDB-GENE-040426-2788]
37. fkbp3 ENSDARG00000098059 5428 1.722 - - - - 0.910 - 0.812 - - FK506 binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-030616-419]
38. eif2s1b ENSDARG00000052178 11961 1.719 0.902 - - - - - 0.817 - - eukaryotic translation initiation factor 2, subunit 1 alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-283]
39. phb ENSDARG00000057414 9551 1.715 - - - - 0.893 - 0.822 - - prohibitin [Source:ZFIN;Acc:ZDB-GENE-030131-6577]
40. stau1 ENSDARG00000044182, ENSDARG00000115476 6121 1.708 - - - - 0.916 - 0.792 - - staufen double-stranded RNA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6372]
41. vgll4b ENSDARG00000103730 5266 1.698 - - - - 0.915 - 0.783 - - vestigial-like family member 4b [Source:ZFIN;Acc:ZDB-GENE-040426-2445]
42. atp5ia 4773 1.693 0.939 - - - - - 0.754 - - ATP synthase, H+ transporting, mitochondrial Fo complex, subunit Ea
43. ctdspla ENSDARG00000071673 1447 1.691 - - - - 0.916 - 0.775 - - CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like a [Source:ZFIN;Acc:ZDB-GENE-060825-333]
44. snrpe ENSDARG00000033175 7462 1.69 - - - - 0.948 - 0.742 - - small nuclear ribonucleoprotein polypeptide E [Source:ZFIN;Acc:ZDB-GENE-040426-1112]
45. kras ENSDARG00000010844 2885 1.686 0.886 - 0.800 - - - - - - v-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog [Source:ZFIN;Acc:ZDB-GENE-040808-67]
46. emc2 ENSDARG00000003308, ENSDARG00000114541 7141 1.686 0.908 - - - - - 0.778 - - ER membrane protein complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-040625-82]
47. glrx3 ENSDARG00000098785 4138 1.681 - - 0.811 - - - 0.870 - - glutaredoxin 3 [Source:ZFIN;Acc:ZDB-GENE-041010-22]
48. hcfc1b ENSDARG00000012519 3633 1.673 - - - - 0.930 - 0.743 - - host cell factor C1b [Source:ZFIN;Acc:ZDB-GENE-030131-2411]
49. wsb1 ENSDARG00000021343 3828 1.671 - - - - 0.896 - 0.775 - - WD repeat and SOCS box containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1946]
50. apip ENSDARG00000003132 1212 1.671 0.902 - 0.769 - - - - - - APAF1 interacting protein [Source:ZFIN;Acc:ZDB-GENE-040912-128]
51. arl14ep ENSDARG00000001210 3029 1.671 - - - - 0.942 - 0.729 - - ADP-ribosylation factor-like 14 effector protein [Source:ZFIN;Acc:ZDB-GENE-060825-216]
52. mocs2 ENSDARG00000077202, ENSDARG00000114592, ENSDARG00000114882 942 1.664 0.900 - 0.764 - - - - - - molybdenum cofactor synthesis 2 [Source:ZFIN;Acc:ZDB-GENE-110411-53]
53. nudt3a ENSDARG00000016256 2713 1.662 - - - - 0.918 - 0.744 - - nudix (nucleoside diphosphate linked moiety X)-type motif 3a [Source:ZFIN;Acc:ZDB-GENE-040426-792]
54. ammecr1 ENSDARG00000012892 14475 1.659 0.888 - - - - - 0.771 - - Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1 homolog (human) [Source:ZFIN;Acc:ZDB-GENE-040426-1533]
55. immt ENSDARG00000102874 3435 1.656 0.933 - - - - - 0.723 - - inner membrane protein, mitochondrial (mitofilin) [Source:ZFIN;Acc:ZDB-GENE-030131-5417]
56. snrpc ENSDARG00000009871 9567 1.649 - - - - 0.884 - 0.765 - - small nuclear ribonucleoprotein polypeptide C [Source:ZFIN;Acc:ZDB-GENE-020419-26]
57. ep300b ENSDARG00000061108 5173 1.646 0.902 - - - - - 0.744 - - E1A binding protein p300 b [Source:ZFIN;Acc:ZDB-GENE-080403-15]
58. cox6b2 ENSDARG00000037860 33134 1.646 - 0.869 - - - - 0.777 - - cytochrome c oxidase subunit 6B2 [Source:ZFIN;Acc:ZDB-GENE-040426-1566]
59. gars ENSDARG00000059070 17015 1.641 0.891 - - - - - 0.750 - - glycyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-9174]
60. sgk2b ENSDARG00000006598 1039 1.64 0.900 - - - - - 0.740 - - serum/glucocorticoid regulated kinase 2b [Source:ZFIN;Acc:ZDB-GENE-060929-44]
61. phgdh ENSDARG00000001873 8325 1.638 0.833 - 0.805 - - - - - - phosphoglycerate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-030131-647]
62. atp1a1b ENSDARG00000019856, ENSDARG00000115121 1953 1.633 - - - - 0.912 - - 0.721 - ATPase Na+/K+ transporting subunit alpha 1b [Source:ZFIN;Acc:ZDB-GENE-001212-5]
63. MZT1 ENSDARG00000096668 2514 1.63 - - - - - - 0.876 - 0.754 mitotic spindle organizing protein 1 [Source:HGNC Symbol;Acc:HGNC:33830]
64. rps11 ENSDARG00000053058 16233 1.627 0.920 - 0.707 - - - - - - ribosomal protein S11 [Source:ZFIN;Acc:ZDB-GENE-040426-2701]
65. cilp ENSDARG00000053362 1429 1.625 0.924 - - - - - 0.701 - - cartilage intermediate layer protein, nucleotide pyrophosphohydrolase [Source:ZFIN;Acc:ZDB-GENE-050208-76]
66. cpsf3 ENSDARG00000027649 6897 1.624 - - - - 0.899 - 0.725 - - cleavage and polyadenylation specific factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3275]
67. ndufab1a ENSDARG00000058463, ENSDARG00000112762 11317 1.613 - - - - 0.867 - 0.746 - - NADH:ubiquinone oxidoreductase subunit AB1a [Source:ZFIN;Acc:ZDB-GENE-040801-1]
68. CU571336.1 ENSDARG00000099892 2164 1.607 0.893 - - - - - - - 0.714
69. pfkfb4l pfkfb4l 2539 1.603 0.891 - - - - - - - 0.712
70. carm1 ENSDARG00000018698 5599 1.6 0.897 - - - - - - - 0.703 coactivator-associated arginine methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040724-77]
71. cant1a ENSDARG00000012192 1324 1.599 0.881 - 0.718 - - - - - - calcium activated nucleotidase 1a [Source:ZFIN;Acc:ZDB-GENE-040426-2441]
72. eif1axa ENSDARG00000029003, ENSDARG00000114914 3973 1.594 0.865 - - - - - 0.729 - - eukaryotic translation initiation factor 1A X-linked a [Source:ZFIN;Acc:ZDB-GENE-041010-185]
73. hoxb7a ENSDARG00000056030 1212 1.593 0.893 - - - - - 0.700 - - homeobox B7a [Source:ZFIN;Acc:ZDB-GENE-000329-2]
74. ktn1 ENSDARG00000032802 6251 1.587 - - 0.829 - - - 0.758 - - kinectin 1 [Source:ZFIN;Acc:ZDB-GENE-030408-4]
75. hypk ENSDARG00000059725 20584 1.583 - - - - 0.755 - 0.828 - - huntingtin interacting protein K [Source:ZFIN;Acc:ZDB-GENE-080515-6]
76. tmem182 tmem182 12589 1.579 0.839 - - - 0.740 - - - -
77. cct8 ENSDARG00000008243 6843 1.577 - - 0.836 - - - 0.741 - - chaperonin containing TCP1, subunit 8 (theta) [Source:ZFIN;Acc:ZDB-GENE-040426-876]
78. pl10 pl10 10795 1.571 - - - - 0.763 - 0.808 - -
79. ctps1a ENSDARG00000030700 3868 1.563 0.758 - 0.805 - - - - - - CTP synthase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-808]
80. cox7a3 20842 1.56 - - - - 0.806 - - - 0.754 cytochrome c oxidase subunit VIIa polypeptide 3
81. srp54 ENSDARG00000098367 2301 1.555 - - 0.789 - - - 0.766 - - signal recognition particle 54 [Source:ZFIN;Acc:ZDB-GENE-040426-818]
82. BX511252.1 BX511252.1 59309 1.549 0.830 - - - 0.719 - - - -
83. abce1 ENSDARG00000007216 7502 1.548 - - - - - 0.706 0.842 - - ATP-binding cassette, sub-family E (OABP), member 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1995]
84. higd2a ENSDARG00000052371 7354 1.542 - - - - - 0.781 0.761 - - HIG1 hypoxia inducible domain family, member 2A [Source:ZFIN;Acc:ZDB-GENE-050417-119]
85. nsa2 ENSDARG00000007708 6329 1.54 - - 0.837 0.703 - - - - - NSA2 ribosome biogenesis homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-488]
86. fgfr2 ENSDARG00000058115 6743 1.539 0.820 - - - - 0.719 - - - fibroblast growth factor receptor 2 [Source:ZFIN;Acc:ZDB-GENE-030323-1]
87. phlda2 ENSDARG00000042874, ENSDARG00000114844 3876 1.536 0.800 - 0.736 - - - - - - pleckstrin homology-like domain, family A, member 2 [Source:ZFIN;Acc:ZDB-GENE-050522-73]
88. uqcrc1 ENSDARG00000052304, ENSDARG00000110068 13973 1.53 - - 0.798 - - - 0.732 - - ubiquinol-cytochrome c reductase core protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1792]
89. psmc3 ENSDARG00000007141 5592 1.526 - - - - - - 0.752 - 0.774 proteasome 26S subunit, ATPase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-666]
90. UBE2D2 ENSDARG00000043484 11723 1.518 - - 0.773 - 0.745 - - - - ubiquitin-conjugating enzyme E2D 2 (UBC4/5 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-120312-1]
91. zgc:193541 ENSDARG00000092873 21276 1.513 - - - - 0.760 - 0.753 - - zgc:193541 [Source:ZFIN;Acc:ZDB-GENE-081022-15]
92. txnl4a ENSDARG00000036190 2048 1.513 - - 0.774 - - - - - 0.739 thioredoxin-like 4A [Source:ZFIN;Acc:ZDB-GENE-041010-25]
93. arid4a ENSDARG00000043873 4176 1.511 - - 0.794 - - - - - 0.717 AT rich interactive domain 4A (RBP1-like) [Source:ZFIN;Acc:ZDB-GENE-050809-105]
94. ank2b ENSDARG00000043313 3065 1.51 - - - - - - 0.703 - 0.807 ankyrin 2b, neuronal [Source:ZFIN;Acc:ZDB-GENE-041010-165]
95. rps27a ENSDARG00000032725, ENSDARG00000114059 132883 1.505 - - 0.726 - - - 0.779 - - ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018]
96. cwc25 ENSDARG00000003382 2134 1.501 - - 0.781 - - - - - 0.720 CWC25 spliceosome-associated protein homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-2817]
97. mrps33 ENSDARG00000020015 3551 1.499 - - 0.765 - - - 0.734 - - mitochondrial ribosomal protein S33 [Source:ZFIN;Acc:ZDB-GENE-040715-6]
98. hif1al ENSDARG00000100826 18627 1.488 - - - - - 0.754 0.734 - - hypoxia inducible factor 1 subunit alpha, like [Source:ZFIN;Acc:ZDB-GENE-040426-1315]
99. hnrnpd ENSDARG00000059246, ENSDARG00000109297, ENSDARG00000113453 3440 1.485 - - - - - - 0.750 - 0.735 heterogeneous nuclear ribonucleoprotein D [Source:ZFIN;Acc:ZDB-GENE-070424-97]
100. supt6h ENSDARG00000006524 3221 1.483 - - - - - - 0.707 - 0.776 SPT6 homolog, histone chaperone [Source:ZFIN;Acc:ZDB-GENE-030131-7949]

There are 1243 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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