Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for ddx6

Gene Name Gene ID Reads Annotation
ddx6 ENSDARG00000061338 2514 DEAD (Asp-Glu-Ala-Asp) box helicase 6 [Source:ZFIN;Acc:ZDB-GENE-070912-83]










Genes with expression patterns similar to ddx6

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ddx6 ENSDARG00000061338 2514 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 DEAD (Asp-Glu-Ala-Asp) box helicase 6 [Source:ZFIN;Acc:ZDB-GENE-070912-83]
2. hoxc3a ENSDARG00000070339 3379 2.833 - 0.992 - - - 0.988 - - 0.853 homeobox C3a [Source:ZFIN;Acc:ZDB-GENE-980526-532]
3. plekhh1 ENSDARG00000053835 2123 2.788 - - - - - 0.998 - 0.822 0.968 pleckstrin homology domain containing, family H (with MyTH4 domain) member 1 [Source:ZFIN;Acc:ZDB-GENE-061219-1]
4. ap2b1 ENSDARG00000035152 2912 2.768 - 0.998 - - - - - 0.863 0.907 adaptor related protein complex 2 subunit beta 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6564]
5. dctn3 ENSDARG00000041363 3351 2.756 - - - - - 0.996 - 0.799 0.961 dynactin 3 (p22) [Source:ZFIN;Acc:ZDB-GENE-040704-65]
6. rarga ENSDARG00000034117 1238 2.666 - 0.996 - - - - 0.737 - 0.933 retinoic acid receptor gamma a [Source:ZFIN;Acc:ZDB-GENE-980526-531]
7. rnf183 ENSDARG00000068851 2427 1.964 - 0.970 - - - 0.994 - - - ring finger protein 183 [Source:ZFIN;Acc:ZDB-GENE-060929-1090]
8. ppp2r5eb ENSDARG00000069118 1902 1.955 - - - - - 0.997 - - 0.958 protein phosphatase 2, regulatory subunit B', epsilon isoform b [Source:ZFIN;Acc:ZDB-GENE-030904-6]
9. cdipt ENSDARG00000070686 1318 1.952 - 0.997 - - - - - - 0.955 CDP-diacylglycerol--inositol 3-phosphatidyltransferase (phosphatidylinositol synthase) [Source:ZFIN;Acc:ZDB-GENE-040426-2536]
10. lix1l ENSDARG00000063244 2061 1.91 - 0.996 - - - - - - 0.914 limb and CNS expressed 1 like [Source:ZFIN;Acc:ZDB-GENE-060503-777]
11. elavl1 11672 1.899 - 0.973 - - - - - 0.926 - ELAV like RNA binding protein 1, transcript variant X3
12. cdc42l ENSDARG00000040158, ENSDARG00000116748 11671 1.893 - 0.901 - - - 0.992 - - - cell division cycle 42, like [Source:ZFIN;Acc:ZDB-GENE-030131-6069]
13. fam133b ENSDARG00000013863 5070 1.882 - 0.994 - - - - - - 0.888 family with sequence similarity 133, member B [Source:ZFIN;Acc:ZDB-GENE-060503-229]
14. eif4g2a ENSDARG00000020377, ENSDARG00000112658 6895 1.873 - 0.993 - - - - - - 0.880 eukaryotic translation initiation factor 4, gamma 2a [Source:ZFIN;Acc:ZDB-GENE-030131-2173]
15. TMEM218 ENSDARG00000027129 716 1.839 - - - - - - - 0.869 0.970 transmembrane protein 218 [Source:ZFIN;Acc:ZDB-GENE-040426-1232]
16. eif5 ENSDARG00000003681 7986 1.816 - 0.991 - - - - - - 0.825 eukaryotic translation initiation factor 5 [Source:ZFIN;Acc:ZDB-GENE-030131-975]
17. zgc:162356 zgc:162356 5115 1.815 - - - - - 0.984 - - 0.831
18. zeb2a ENSDARG00000062338, ENSDARG00000111349, ENSDARG00000115964 6087 1.796 - 0.997 - - - - - 0.799 - zinc finger E-box binding homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-070912-553]
19. sptlc2b ENSDARG00000074287 1853 1.792 - - - - - 0.998 0.794 - - serine palmitoyltransferase, long chain base subunit 2b [Source:ZFIN;Acc:ZDB-GENE-080305-8]
20. gltscr2 gltscr2 5763 1.788 - 0.980 - - - - - - 0.808
21. siah1 ENSDARG00000030871 1590 1.787 - - - - - - - 0.857 0.930 siah E3 ubiquitin protein ligase 1 [Source:ZFIN;Acc:ZDB-GENE-010319-31]
22. id3 ENSDARG00000054823 3484 1.779 - 0.911 - - - - - 0.868 - inhibitor of DNA binding 3 [Source:ZFIN;Acc:ZDB-GENE-020515-1]
23. kidins220b ENSDARG00000017338 1937 1.777 - - - - - - - 0.877 0.900 kinase D-interacting substrate 220b [Source:ZFIN;Acc:ZDB-GENE-030131-7824]
24. khdrbs1b ENSDARG00000070475 18157 1.766 - 0.982 - - - - - 0.784 - KH domain containing, RNA binding, signal transduction associated 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2344]
25. dido1 ENSDARG00000057940 3819 1.752 - 0.994 - - - - 0.758 - - death inducer-obliterator 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6117]
26. bckdha ENSDARG00000040555, ENSDARG00000111762 7620 1.745 - 0.972 - - - - - 0.773 - branched chain keto acid dehydrogenase E1, alpha polypeptide [Source:ZFIN;Acc:ZDB-GENE-050522-376]
27. limk2 ENSDARG00000005104 2598 1.738 - - - - - - - 0.808 0.930 LIM domain kinase 2 [Source:ZFIN;Acc:ZDB-GENE-040718-398]
28. CYYR1 ENSDARG00000103783 4107 1.737 - 0.979 - - - - - - 0.758 cysteine/tyrosine-rich 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2356]
29. dusp11 ENSDARG00000038156 2490 1.728 - - - - - - - 0.779 0.949 dual specificity phosphatase 11 (RNA/RNP complex 1-interacting) [Source:ZFIN;Acc:ZDB-GENE-050417-226]
30. pank1b ENSDARG00000010098 3202 1.723 - - - - - - - 0.822 0.901 pantothenate kinase 1b [Source:ZFIN;Acc:ZDB-GENE-070209-259]
31. si:dkey-147f3.4_1 ENSDARG00000071029, ENSDARG00000092077 2259 1.716 - - - - - - 0.795 - 0.921 si:dkey-147f3.4 [Source:ZFIN;Acc:ZDB-GENE-061009-29]
32. stk35l ENSDARG00000057497 3582 1.712 - - - - - - - 0.860 0.852 serine/threonine kinase 35, like [Source:ZFIN;Acc:ZDB-GENE-041212-52]
33. thoc2 ENSDARG00000037503 8711 1.701 - 0.994 - - - - 0.707 - - THO complex 2 [Source:ZFIN;Acc:ZDB-GENE-030616-54]
34. DALRD3 ENSDARG00000068602 3062 1.697 - - - - - - 0.762 - 0.935 DALR anticodon binding domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-061103-415]
35. lin7c ENSDARG00000027322 3083 1.674 - - - - - - - 0.795 0.879 lin-7 homolog C (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-041011-2]
36. actn3a ENSDARG00000013755, ENSDARG00000111128 22706 1.671 - 0.937 - - - 0.734 - - - actinin alpha 3a [Source:ZFIN;Acc:ZDB-GENE-000329-9]
37. cpne1 ENSDARG00000075536 4063 1.666 - 0.919 - - - - - - 0.747 copine I [Source:ZFIN;Acc:ZDB-GENE-030131-3562]
38. ehd3 ENSDARG00000007869 3238 1.661 - - - - - - 0.712 - 0.949 EH-domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-041014-352]
39. grpel2 ENSDARG00000069421 5673 1.614 - - - - - 0.872 - - 0.742 GrpE-like 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-091204-188]
40. GRAMD4 GRAMD4 1967 1.602 - - - 0.791 - - - - 0.811
41. seta ENSDARG00000031495 39977 1.599 - 0.733 - - - - - 0.866 - SET nuclear proto-oncogene a [Source:ZFIN;Acc:ZDB-GENE-030131-2221]
42. KIAA0355 3250 1.593 - - - - - - 0.731 - 0.862 KIAA0355 ortholog, transcript variant X1
43. ednraa ENSDARG00000011876, ENSDARG00000114764 1573 1.583 - - - - - - 0.726 0.857 - endothelin receptor type Aa [Source:ZFIN;Acc:ZDB-GENE-010906-2]
44. psenen ENSDARG00000068698 2777 1.567 - - - - - - 0.702 0.865 - presenilin enhancer, gamma-secretase subunit [Source:ZFIN;Acc:ZDB-GENE-040218-1]
45. aco2 ENSDARG00000007294, ENSDARG00000111879 5162 1.562 - - - - - 0.805 - - 0.757 aconitase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-030131-1390]
46. PHB2 PHB2 3755 1.532 - - - - - 0.708 - 0.824 -
47. zw10 ENSDARG00000018738 801 1.526 - - - - - - 0.734 0.792 - zw10 kinetochore protein [Source:ZFIN;Acc:ZDB-GENE-040426-800]
48. rbfox2 ENSDARG00000052182 6621 1.483 0.741 - - - - - - - 0.742 RNA binding fox-1 homolog 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2464]
49. gsr ENSDARG00000019236, ENSDARG00000114106 1149 0.999 - - - - - 0.999 - - - glutathione reductase [Source:ZFIN;Acc:ZDB-GENE-050522-116]
50. zgc:112148 ENSDARG00000001804 386 0.999 - - - - - 0.999 - - - zgc:112148 [Source:ZFIN;Acc:ZDB-GENE-050417-235]
51. l2hgdh ENSDARG00000060500 713 0.999 - - - - - 0.999 - - - L-2-hydroxyglutarate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-090319-6]
52. PIK3CA_1 PIK3CA_1 4065 0.999 - - - - - 0.999 - - -
53. mbtps1 ENSDARG00000014634, ENSDARG00000109507, ENSDARG00000110774 2290 0.999 - - - - - 0.999 - - - membrane-bound transcription factor peptidase, site 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4909]
54. efemp2a ENSDARG00000094324 39261 0.999 - - - - - 0.999 - - - EGF containing fibulin extracellular matrix protein 2a [Source:ZFIN;Acc:ZDB-GENE-041212-8]
55. trappc5 ENSDARG00000026068 1350 0.999 - - - - - 0.999 - - - trafficking protein particle complex 5 [Source:ZFIN;Acc:ZDB-GENE-040718-185]
56. cpz ENSDARG00000075521 2356 0.999 - - - - - 0.999 - - - carboxypeptidase Z [Source:ZFIN;Acc:ZDB-GENE-090313-267]
57. ifi30 ENSDARG00000056378, ENSDARG00000112359 2472 0.998 - - - - - 0.998 - - - interferon, gamma-inducible protein 30 [Source:ZFIN;Acc:ZDB-GENE-030131-8447]
58. stim1a ENSDARG00000060723 1200 0.998 - 0.998 - - - - - - - stromal interaction molecule 1a [Source:ZFIN;Acc:ZDB-GENE-060503-914]
59. fam192a ENSDARG00000041631 4113 0.998 - 0.998 - - - - - - - family with sequence similarity 192, member A [Source:ZFIN;Acc:ZDB-GENE-030131-6692]
60. b4galt1 ENSDARG00000002634 1076 0.998 - - - - - 0.998 - - - UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-050417-236]
61. txndc11 ENSDARG00000101291 589 0.998 - - - - - 0.998 - - - thioredoxin domain containing 11 [Source:ZFIN;Acc:ZDB-GENE-041008-112]
62. pax5 ENSDARG00000037383 319 0.998 - - - - - 0.998 - - - paired box 5 [Source:ZFIN;Acc:ZDB-GENE-001030-2]
63. cab39 ENSDARG00000043451 1326 0.998 - - - - - 0.998 - - - calcium binding protein 39 [Source:ZFIN;Acc:ZDB-GENE-040625-158]
64. si:dkeyp-19e1.3 ENSDARG00000051836 531 0.998 - - - - - 0.998 - - - si:dkeyp-19e1.3 [Source:ZFIN;Acc:ZDB-GENE-081104-56]
65. cbsa ENSDARG00000053500, ENSDARG00000112676 792 0.998 - - - - - 0.998 - - - cystathionine-beta-synthase a [Source:ZFIN;Acc:ZDB-GENE-050417-367]
66. gnrh3 ENSDARG00000056214, ENSDARG00000112890 226 0.998 - - - - - 0.998 - - - gonadotropin-releasing hormone 3 [Source:ZFIN;Acc:ZDB-GENE-030724-4]
67. acvr1b acvr1b 2963 0.998 - - - - - 0.998 - - -
68. gdpd3a ENSDARG00000074466 1739 0.998 - - - - - 0.998 - - - glycerophosphodiester phosphodiesterase domain containing 3a [Source:ZFIN;Acc:ZDB-GENE-040426-2279]
69. si:dkeyp-73a2.2 ENSDARG00000079785 313 0.998 - - - - - 0.998 - - - si:dkeyp-73a2.2 [Source:NCBI gene;Acc:100307112]
70. tmem106bb ENSDARG00000035949, ENSDARG00000113700 1415 0.998 - - - - - 0.998 - - - transmembrane protein 106Bb [Source:ZFIN;Acc:ZDB-GENE-050913-37]
71. PLCL2 ENSDARG00000098826 596 0.998 - - - - - 0.998 - - - phospholipase C like 2 [Source:ZFIN;Acc:ZDB-GENE-120426-4]
72. acaa1 ENSDARG00000004687 557 0.998 - - - - - 0.998 - - - acetyl-CoA acyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040704-48]
73. CU929219.1 CU929219.1 383 0.998 - - - - - 0.998 - - -
74. si:ch211-138k19.2 si:ch211-138k19.2 398 0.998 - - - - - 0.998 - - -
75. socs3a ENSDARG00000025428 349 0.998 - - - - - 0.998 - - - suppressor of cytokine signaling 3a [Source:ZFIN;Acc:ZDB-GENE-030131-7349]
76. insra ENSDARG00000011948 1258 0.998 - - - - - 0.998 - - - insulin receptor a [Source:ZFIN;Acc:ZDB-GENE-020503-3]
77. ube2z ENSDARG00000029215 1059 0.998 - - - - - 0.998 - - - ubiquitin-conjugating enzyme E2Z [Source:ZFIN;Acc:ZDB-GENE-040718-15]
78. fam84b ENSDARG00000032859, ENSDARG00000116831 386 0.998 - - - - - 0.998 - - - family with sequence similarity 84, member B [Source:ZFIN;Acc:ZDB-GENE-060929-1130]
79. grip1 ENSDARG00000015053 1275 0.998 - - - - - 0.998 - - - glutamate receptor interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-041210-125]
80. mea1 ENSDARG00000039820 589 0.998 - - - - - 0.998 - - - male-enhanced antigen 1 [Source:ZFIN;Acc:ZDB-GENE-070424-117]
81. cdk13 ENSDARG00000076791 828 0.998 - - - - - 0.998 - - - cyclin-dependent kinase 13 [Source:ZFIN;Acc:ZDB-GENE-030131-4975]
82. znf740 znf740 2458 0.998 - 0.998 - - - - - - -
83. CZv9_NA991H1orf52 CZv9_NA991H1orf52 1723 0.998 - - - - - 0.998 - - -
84. uqcrfs1 ENSDARG00000007745 4654 0.997 - 0.997 - - - - - - - ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2060]
85. tmem181 ENSDARG00000045910 2288 0.997 - 0.997 - - - - - - - transmembrane protein 181 [Source:ZFIN;Acc:ZDB-GENE-060503-309]
86. anapc11 ENSDARG00000102531, ENSDARG00000116987 1769 0.997 - 0.997 - - - - - - - APC11 anaphase promoting complex subunit 11 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-061013-383]
87. GIGYF1 1830 0.997 - - - - - 0.997 - - - GRB10 interacting GYF protein 1, transcript variant X6
88. CDS1 ENSDARG00000019549 1659 0.997 - - - - - 0.997 - - - CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 1 [Source:ZFIN;Acc:ZDB-GENE-070705-78]
89. klhl20 ENSDARG00000038801 936 0.997 - 0.997 - - - - - - - kelch-like family member 20 [Source:ZFIN;Acc:ZDB-GENE-040426-1935]
90. MRPL52 ENSDARG00000090568 4402 0.997 - - - - - 0.997 - - - mitochondrial ribosomal protein L52 [Source:ZFIN;Acc:ZDB-GENE-110325-1]
91. si:ch211-114n24.7 si:ch211-114n24.7 2544 0.997 - - - - - 0.997 - - -
92. naa50 ENSDARG00000027825, ENSDARG00000116858 3221 0.997 - 0.997 - - - - - - - N(alpha)-acetyltransferase 50, NatE catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-040801-142]
93. sema3gb ENSDARG00000013607 1531 0.997 - 0.997 - - - - - - - sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Gb [Source:ZFIN;Acc:ZDB-GENE-050513-4]
94. csrp1a ENSDARG00000006603 5188 0.997 - - - - - 0.997 - - - cysteine and glycine-rich protein 1a [Source:ZFIN;Acc:ZDB-GENE-030909-4]
95. gbx1 ENSDARG00000071418 871 0.997 - - - - - 0.997 - - - gastrulation brain homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-020117-2]
96. si:ch211-251b21.1 ENSDARG00000007275 15724 0.997 - 0.997 - - - - - - - si:ch211-251b21.1 [Source:ZFIN;Acc:ZDB-GENE-060809-5]
97. ogfr ENSDARG00000037837 1001 0.997 - 0.997 - - - - - - - opioid growth factor receptor [Source:ZFIN;Acc:ZDB-GENE-030131-377]
98. glo1 ENSDARG00000068978 1384 0.997 - 0.997 - - - - - - - glyoxalase 1 [Source:ZFIN;Acc:ZDB-GENE-030722-9]
99. her9 ENSDARG00000056438, ENSDARG00000115775 3099 0.997 - - - - - 0.997 - - - hairy-related 9 [Source:ZFIN;Acc:ZDB-GENE-011213-1]
100. rxrbb ENSDARG00000002006, ENSDARG00000117079 1975 0.997 - - - - - 0.997 - - - retinoid x receptor, beta b [Source:ZFIN;Acc:ZDB-GENE-990415-242]

There are 1042 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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