Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for ddx54

Gene Name Gene ID Reads Annotation
ddx54 ENSDARG00000105286 183 DEAD (Asp-Glu-Ala-Asp) box polypeptide 54 [Source:ZFIN;Acc:ZDB-GENE-021220-2]










Genes with expression patterns similar to ddx54

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ddx54 ENSDARG00000105286 183 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 DEAD (Asp-Glu-Ala-Asp) box polypeptide 54 [Source:ZFIN;Acc:ZDB-GENE-021220-2]
2. lrtomt lrtomt 39 1.653 - - - 0.711 - 0.942 - - -
3. cdk20 ENSDARG00000003867 27 1.598 - - 0.830 - - 0.768 - - - cyclin-dependent kinase 20 [Source:ZFIN;Acc:ZDB-GENE-041212-84]
4. ptprc ENSDARG00000071437 104 1.579 - - 0.787 - - 0.792 - - - protein tyrosine phosphatase, receptor type, C [Source:ZFIN;Acc:ZDB-GENE-050208-585]
5. serpine3 ENSDARG00000057108 49 1.573 - - 0.829 - - - 0.744 - - serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 3 [Source:ZFIN;Acc:ZDB-GENE-050309-223]
6. nfil3-4 ENSDARG00000092346 3 1.561 - - - - - 0.768 0.793 - - nuclear factor, interleukin 3 regulated, member 4 [Source:ZFIN;Acc:ZDB-GENE-070424-214]
7. si:dkey-2j6.2 si:dkey-2j6.2 5 1.561 - - - - - 0.768 0.793 - -
8. CT573468.1 CT573468.1 283 1.561 - - - - - 0.768 0.793 - -
9. supt7l ENSDARG00000013461 41 1.561 - - - - - 0.768 0.793 - - SPT7-like STAGA complex gamma subunit [Source:ZFIN;Acc:ZDB-GENE-050227-17]
10. si:rp71-36d5.4 si:rp71-36d5.4 20 1.561 - - - - - 0.768 0.793 - -
11. axdnd1 ENSDARG00000062355 30 1.556 - - - - - 0.768 0.788 - - axonemal dynein light chain domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050208-341]
12. spef2 ENSDARG00000098330 59 1.556 - - - - - 0.768 0.788 - - sperm flagellar 2 [Source:ZFIN;Acc:ZDB-GENE-060526-47]
13. TP53BP2 TP53BP2 217 1.551 0.779 - - - - - 0.772 - -
14. phyh ENSDARG00000086740 88 1.535 - 0.724 0.811 - - - - - - phytanoyl-CoA 2-hydroxylase [Source:ZFIN;Acc:ZDB-GENE-050417-361]
15. hsh2d ENSDARG00000042908, ENSDARG00000110717 91 1.533 - - - - - 0.768 0.765 - - hematopoietic SH2 domain containing [Source:ZFIN;Acc:ZDB-GENE-050410-3]
16. samsn1a ENSDARG00000054543 28 1.529 - - - - - 0.824 0.705 - - SAM domain, SH3 domain and nuclear localisation signals 1a [Source:ZFIN;Acc:ZDB-GENE-030131-8639]
17. rnf152 ENSDARG00000087782 141 1.527 - - 0.800 0.727 - - - - - ring finger protein 152 [Source:ZFIN;Acc:ZDB-GENE-050327-84]
18. pald1b ENSDARG00000039352 66 1.526 - - 0.804 0.722 - - - - - phosphatase domain containing, paladin 1b [Source:ZFIN;Acc:ZDB-GENE-070424-88]
19. cldn15la ENSDARG00000016081 197 1.524 - - - - - 0.783 0.741 - - claudin 15-like a [Source:ZFIN;Acc:ZDB-GENE-010328-12]
20. si:rp71-17i16.6 ENSDARG00000095453 167 1.519 - - - - - 0.721 0.798 - - si:rp71-17i16.6 [Source:ZFIN;Acc:ZDB-GENE-090313-410]
21. foxf2a ENSDARG00000017195 345 1.511 0.728 - - - - - 0.783 - - forkhead box F2a [Source:ZFIN;Acc:ZDB-GENE-110407-5]
22. si:dkey-14d8.9 si:dkey-14d8.9 66 1.509 - - - 0.788 - - 0.721 - -
23. si:dkey-14d8.2 38 1.499 - - - 0.707 - - 0.792 - - si:dkey-14d8.2
24. si:ch211-199o1.2 ENSDARG00000056210 33 1.493 0.704 - 0.789 - - - - - - si:ch211-199o1.2 [Source:ZFIN;Acc:ZDB-GENE-060503-867]
25. CABZ01074946.1 CABZ01074946.1 119 1.492 - 0.724 - - - 0.768 - - -
26. wbp1la ENSDARG00000013245 143 1.492 0.787 - - - - - 0.705 - - WW domain binding protein 1-like a [Source:ZFIN;Acc:ZDB-GENE-030131-1961]
27. si:ch211-102c2.8 ENSDARG00000093823 168 1.478 - - - - - 0.758 0.720 - - si:ch211-102c2.8 [Source:ZFIN;Acc:ZDB-GENE-081104-98]
28. ncf1 ENSDARG00000033735 83 1.477 - - - - - 0.757 0.720 - - neutrophil cytosolic factor 1 [Source:ZFIN;Acc:ZDB-GENE-031006-6]
29. tbl3 ENSDARG00000052344 1530 1.455 - 0.723 - - - - 0.732 - - transducin (beta)-like 3 [Source:ZFIN;Acc:ZDB-GENE-041114-104]
30. si:ch73-343l4.2 ENSDARG00000079903 10 1 - - - - - 1.000 - - - si:ch73-343l4.2 [Source:ZFIN;Acc:ZDB-GENE-090313-154]
31. tagln ENSDARG00000045408 48 0.981 - - - - - 0.981 - - - transgelin [Source:ZFIN;Acc:ZDB-GENE-070912-1]
32. aar2 ENSDARG00000018658 297 0.957 - - - - - - 0.957 - - AAR2 splicing factor homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040704-68]
33. npffr1l3 ENSDARG00000010712 18 0.942 - - - - - 0.942 - - - neuropeptide FF receptor 1 like 3 [Source:ZFIN;Acc:ZDB-GENE-070424-44]
34. wnt8b ENSDARG00000006911 98 0.942 - - - - - 0.942 - - - wingless-type MMTV integration site family, member 8b [Source:ZFIN;Acc:ZDB-GENE-990415-279]
35. zgc:158446 36 0.942 - - - - - 0.942 - - - zgc:158446
36. CABZ01067743.1 CABZ01067743.1 48 0.942 - - - - - 0.942 - - -
37. ibtk ENSDARG00000074424 146 0.942 - - - - - 0.942 - - - inhibitor of Bruton agammaglobulinemia tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-030131-6246]
38. gnrh2 ENSDARG00000044754, ENSDARG00000116186 55 0.942 - - - - - 0.942 - - - gonadotropin-releasing hormone 2 [Source:ZFIN;Acc:ZDB-GENE-030516-1]
39. SNORD14 SNORD14 31 0.942 - - - - - 0.942 - - -
40. zgc:153345 ENSDARG00000055622 29 0.942 - - - - - 0.942 - - - zgc:153345 [Source:ZFIN;Acc:ZDB-GENE-061103-487]
41. si:ch73-248e21.5 ENSDARG00000088283 19 0.942 - - - - - 0.942 - - - si:ch73-248e21.5 [Source:ZFIN;Acc:ZDB-GENE-120215-255]
42. ABCC10 ENSDARG00000077988, ENSDARG00000111885, ENSDARG00000113210 81 0.942 - - - - - 0.942 - - - ATP-binding cassette, sub-family C (CFTR/MRP), member 10 [Source:ZFIN;Acc:ZDB-GENE-050517-24]
43. GPR180 73 0.934 - - - - - - 0.934 - - G protein-coupled receptor 180, transcript variant X2
44. AK9 ENSDARG00000021913 53 0.924 - - - - - - 0.924 - - adenylate kinase 9 [Source:ZFIN;Acc:ZDB-GENE-041014-337]
45. SOWAHD ENSDARG00000087152, ENSDARG00000109642 24 0.923 - - - - - - 0.923 - - sosondowah ankyrin repeat domain family d [Source:ZFIN;Acc:ZDB-GENE-120215-42]
46. bpnt1 ENSDARG00000043684 78 0.912 - - - - - - 0.912 - - bisphosphate nucleotidase 1 [Source:ZFIN;Acc:ZDB-GENE-040718-46]
47. narf ENSDARG00000024184, ENSDARG00000110086 240 0.904 - - - - - - 0.904 - - nuclear prelamin A recognition factor [Source:ZFIN;Acc:ZDB-GENE-040718-31]
48. tmeff2b ENSDARG00000058699 82 0.902 - - - - - - 0.902 - - transmembrane protein with EGF-like and two follistatin-like domains 2b [Source:ZFIN;Acc:ZDB-GENE-101001-4]
49. hcfc1a ENSDARG00000015990, ENSDARG00000111404 59 0.901 - - - - - - 0.901 - - host cell factor C1a [Source:ZFIN;Acc:ZDB-GENE-030912-10]
50. uaca uaca 140 0.895 0.895 - - - - - - - -
51. CU683898.1 CU683898.1 203 0.895 - - - - - - 0.895 - -
52. bokb ENSDARG00000008807 29 0.895 - - - - - - 0.895 - - BOK, BCL2 family apoptosis regulator b [Source:ZFIN;Acc:ZDB-GENE-040426-1346]
53. GLIPR1 GLIPR1 37 0.894 - - - - - - 0.894 - -
54. si:dkey-32m20.1 43 0.894 - - - - - - 0.894 - - si:dkey-32m20.1
55. ccdc78 ENSDARG00000030095 8 0.894 - - - - - - 0.894 - - coiled-coil domain containing 78 [Source:ZFIN;Acc:ZDB-GENE-060301-1]
56. mxa ENSDARG00000021688 14 0.894 - - - - - - 0.894 - - myxovirus (influenza) resistance A [Source:ZFIN;Acc:ZDB-GENE-030721-5]
57. CU856207.1 CU856207.1 87 0.894 - - - - - - 0.894 - -
58. zgc:174700 zgc:174700 35 0.894 - - - - - - 0.894 - -
59. irf3 ENSDARG00000076251 8 0.894 - - - - - - 0.894 - - interferon regulatory factor 3 [Source:ZFIN;Acc:ZDB-GENE-071120-7]
60. THAP9 THAP9 8 0.894 - - - - - - 0.894 - -
61. CU184832.2 CU184832.2 35 0.894 - - - - - - 0.894 - -
62. si:dkey-49n23.3 ENSDARG00000095325 4 0.894 - - - - - - 0.894 - - si:dkey-49n23.3 [Source:ZFIN;Acc:ZDB-GENE-050208-799]
63. si:dkey-269i1.2 si:dkey-269i1.2 6364 0.894 - - - - - - 0.894 - -
64. gal3st1 gal3st1 108 0.889 - - - - - 0.889 - - -
65. faah2a ENSDARG00000008457, ENSDARG00000112163 87 0.887 - - - - - - 0.887 - - fatty acid amide hydrolase 2a [Source:ZFIN;Acc:ZDB-GENE-040718-453]
66. TMEM98 ENSDARG00000059743 214 0.886 - - - - - - 0.886 - - transmembrane protein 98 [Source:ZFIN;Acc:ZDB-GENE-070112-1092]
67. si:ch211-270n8.3 87 0.884 - - - - - - 0.884 - - si:ch211-270n8.3, transcript variant X2
68. SLC5A6 SLC5A6 179 0.878 - - - - - - 0.878 - -
69. p2rx4a ENSDARG00000044752, ENSDARG00000115637 9 0.875 - - - - - 0.875 - - - purinergic receptor P2X, ligand-gated ion channel, 4a [Source:ZFIN;Acc:ZDB-GENE-020806-2]
70. h1m ENSDARG00000102892 319 0.873 - - - - - - 0.873 - - linker histone H1M [Source:ZFIN;Acc:ZDB-GENE-030131-5614]
71. pibf1 ENSDARG00000013006, ENSDARG00000015506 151 0.873 - - - - - - 0.873 - - progesterone immunomodulatory binding factor 1 [Source:ZFIN;Acc:ZDB-GENE-040801-94]
72. rft1 ENSDARG00000060398 146 0.87 - - - - - - 0.870 - - RFT1 homolog [Source:ZFIN;Acc:ZDB-GENE-110411-126]
73. EGLN1 EGLN1 62 0.869 - - - - - - 0.869 - -
74. USP15 958 0.868 - 0.868 - - - - - - - ubiquitin specific peptidase 15
75. si:dkeyp-73a2.2 ENSDARG00000079785 313 0.867 - - - - - - 0.867 - - si:dkeyp-73a2.2 [Source:NCBI gene;Acc:100307112]
76. zgc:73228 zgc:73228 97 0.867 - - - - - - 0.867 - -
77. C11H1orf50 C11H1orf50 671 0.866 - 0.866 - - - - - - -
78. P2RY11 ENSDARG00000014929 75 0.865 - - - - - - 0.865 - - purinergic receptor P2Y11 [Source:ZFIN;Acc:ZDB-GENE-111221-4]
79. grwd1 ENSDARG00000004806, ENSDARG00000109608 1567 0.864 - 0.864 - - - - - - - glutamate-rich WD repeat containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9844]
80. PARP4 ENSDARG00000069934 70 0.863 - - 0.863 - - - - - - poly (ADP-ribose) polymerase family, member 4 [Source:ZFIN;Acc:ZDB-GENE-070912-387]
81. bmp7a ENSDARG00000018260 92 0.862 - - - - - - 0.862 - - bone morphogenetic protein 7a [Source:ZFIN;Acc:ZDB-GENE-000208-25]
82. MYOM1 MYOM1 3870 0.862 - 0.862 - - - - - - -
83. slc3a1 ENSDARG00000017165 136 0.862 - - - - - - 0.862 - - solute carrier family 3 (amino acid transporter heavy chain), member 1 [Source:ZFIN;Acc:ZDB-GENE-090313-225]
84. CABZ01071911.2 CABZ01071911.2 64 0.861 - - - - - - 0.861 - -
85. igdcc4 ENSDARG00000076919 1303 0.86 - 0.860 - - - - - - - immunoglobulin superfamily, DCC subclass, member 4 [Source:ZFIN;Acc:ZDB-GENE-080327-32]
86. LPL ENSDARG00000087697 18 0.86 - - - - - - 0.860 - - lipoprotein lipase [Source:ZFIN;Acc:ZDB-GENE-990415-139]
87. dnaaf1 ENSDARG00000012030 58 0.86 - - - - - - 0.860 - - dynein, axonemal, assembly factor 1 [Source:ZFIN;Acc:ZDB-GENE-031114-4]
88. si:dkey-270b7.5 si:dkey-270b7.5 11 0.86 - - - - - - 0.860 - -
89. FAM120A ENSDARG00000075021 73 0.86 - - - - - - 0.860 - - family with sequence similarity 120A [Source:ZFIN;Acc:ZDB-GENE-110131-10]
90. ABI3 ABI3 31 0.86 - - - - - - 0.860 - -
91. pcdh8 ENSDARG00000006467 317 0.86 - - - - - - 0.860 - - protocadherin 8 [Source:ZFIN;Acc:ZDB-GENE-980526-242]
92. pabpn1l ENSDARG00000087996, ENSDARG00000113382 40 0.857 - - - - - - 0.857 - - poly(A) binding protein, nuclear 1-like (cytoplasmic) [Source:ZFIN;Acc:ZDB-GENE-080709-5]
93. si:dkeyp-53d3.6 204 0.857 - - - - - - 0.857 - - si:dkeyp-53d3.6, transcript variant X1
94. ccny ENSDARG00000063677 66 0.857 - - - - - - 0.857 - - cyclin Y [Source:ZFIN;Acc:ZDB-GENE-091117-45]
95. arl6 ENSDARG00000032056, ENSDARG00000113281 238 0.857 - - - - - - 0.857 - - ADP-ribosylation factor-like 6 [Source:ZFIN;Acc:ZDB-GENE-041219-2]
96. CABZ01032467.1 CABZ01032467.1 400 0.854 - - - - - - 0.854 - -
97. odf3b ENSDARG00000114397, ENSDARG00000116899 21 0.853 - - - - - - 0.853 - - outer dense fiber of sperm tails 3B [Source:ZFIN;Acc:ZDB-GENE-030131-7464]
98. ARG1 ENSDARG00000057429, ENSDARG00000110741 45 0.853 - - - - - - 0.853 - - arginase 1 [Source:ZFIN;Acc:ZDB-GENE-040724-181]
99. slc13a5 slc13a5 15 0.853 - - - - - - 0.853 - -
100. MTERFD2 MTERFD2 140 0.852 - - - - - - 0.852 - -

There are 1077 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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