Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for ddx5

Gene Name Gene ID Reads Annotation
ddx5 ENSDARG00000038068 35302 DEAD (Asp-Glu-Ala-Asp) box helicase 5 [Source:ZFIN;Acc:ZDB-GENE-030131-925]










Genes with expression patterns similar to ddx5

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ddx5 ENSDARG00000038068 35302 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 DEAD (Asp-Glu-Ala-Asp) box helicase 5 [Source:ZFIN;Acc:ZDB-GENE-030131-925]
2. HNRNPAB HNRNPAB 22267 3.355 - 0.906 0.746 - 0.825 - - 0.878 -
3. hnrnph1l ENSDARG00000005551 8727 3.328 - 0.934 - 0.782 0.805 0.807 - - - heterogeneous nuclear ribonucleoprotein H1, like [Source:ZFIN;Acc:ZDB-GENE-030131-275]
4. ewsr1b ENSDARG00000020465, ENSDARG00000117011 10260 3.099 - - 0.720 0.838 0.823 0.718 - - - EWS RNA-binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-030131-1600]
5. nucks1a ENSDARG00000078473 28285 2.887 0.729 - 0.701 - - 0.708 - 0.749 - nuclear casein kinase and cyclin-dependent kinase substrate 1a [Source:ZFIN;Acc:ZDB-GENE-040912-175]
6. hnrnpa0b ENSDARG00000036162, ENSDARG00000112653 27740 2.649 - 0.968 - - - - 0.877 0.804 - heterogeneous nuclear ribonucleoprotein A0b [Source:ZFIN;Acc:ZDB-GENE-030131-6154]
7. ube2e3 ENSDARG00000012244 8909 2.466 - - - 0.737 - 0.853 0.876 - - ubiquitin-conjugating enzyme E2E 3 (UBC4/5 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-408]
8. kif11 ENSDARG00000010948 4973 2.379 - - - - 0.769 - 0.833 0.777 - kinesin family member 11 [Source:ZFIN;Acc:ZDB-GENE-020426-1]
9. TUBA1A ENSDARG00000001889 25294 2.329 - - - 0.734 0.749 - - 0.846 - tubulin, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-090507-4]
10. gapdhs ENSDARG00000039914 8760 2.296 - - - - 0.728 - 0.854 0.714 - glyceraldehyde-3-phosphate dehydrogenase, spermatogenic [Source:ZFIN;Acc:ZDB-GENE-020913-1]
11. smc3 ENSDARG00000019000, ENSDARG00000112055 6553 2.281 - - 0.701 0.716 - - 0.864 - - structural maintenance of chromosomes 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3196]
12. nrf1 ENSDARG00000000018 4683 2.271 - - - 0.746 0.702 - 0.823 - - nuclear respiratory factor 1 [Source:ZFIN;Acc:ZDB-GENE-001221-1]
13. igf2bp1 ENSDARG00000061478 22924 2.266 - - - 0.741 - 0.705 0.820 - - insulin-like growth factor 2 mRNA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-060929-1258]
14. pnrc2 ENSDARG00000053291, ENSDARG00000112537 50848 2.251 - - - 0.718 - - 0.819 0.714 - proline-rich nuclear receptor coactivator 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5475]
15. pcna ENSDARG00000054155 89521 2.24 - - - 0.722 0.736 0.782 - - - proliferating cell nuclear antigen [Source:ZFIN;Acc:ZDB-GENE-000210-8]
16. ywhaqb ENSDARG00000023323 28138 2.224 - - 0.719 0.729 0.776 - - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide b [Source:ZFIN;Acc:ZDB-GENE-030131-7135]
17. cct6a ENSDARG00000021252 33641 2.219 - 0.736 - - - 0.769 0.714 - - chaperonin containing TCP1, subunit 6A (zeta 1) [Source:ZFIN;Acc:ZDB-GENE-011018-2]
18. CR936437.1 CR936437.1 6465 2.204 - - 0.702 0.794 - - - 0.708 -
19. apex1 ENSDARG00000045843 6345 2.183 - - 0.711 0.738 0.734 - - - - APEX nuclease (multifunctional DNA repair enzyme) 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2761]
20. cct2 ENSDARG00000087206, ENSDARG00000104674 19049 1.894 - 0.908 - - - - - - 0.986 chaperonin containing TCP1, subunit 2 (beta) [Source:ZFIN;Acc:ZDB-GENE-020419-6]
21. eif4a3 ENSDARG00000102978 16162 1.83 - 0.924 - - - - 0.906 - - eukaryotic translation initiation factor 4A3 [Source:ZFIN;Acc:ZDB-GENE-040426-915]
22. mbnl2 ENSDARG00000018460 3328 1.766 - 0.917 - - - - 0.849 - - muscleblind-like splicing regulator 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9582]
23. ppib ENSDARG00000092798 21969 1.75 - - - - - - 0.786 - 0.964 peptidylprolyl isomerase B (cyclophilin B) [Source:ZFIN;Acc:ZDB-GENE-040426-1955]
24. ctnnb1 ENSDARG00000014571 12004 1.738 - - - 0.749 - - - - 0.989 catenin (cadherin-associated protein), beta 1 [Source:ZFIN;Acc:ZDB-GENE-980526-362]
25. KLF16 KLF16 3773 1.73 - - - 0.746 - - - - 0.984
26. stag1b ENSDARG00000062137 1814 1.708 - 0.910 - - - - 0.798 - - stromal antigen 1b [Source:ZFIN;Acc:ZDB-GENE-030131-1393]
27. tceb2 10382 1.706 - - - - - - 0.900 0.806 - transcription elongation factor B (SIII), polypeptide 2
28. hnrnpa0a ENSDARG00000089302 45675 1.704 - - - - - - 0.926 0.778 - heterogeneous nuclear ribonucleoprotein A0a [Source:ZFIN;Acc:ZDB-GENE-030131-2249]
29. ube2i ube2i 13024 1.689 - - - 0.841 0.848 - - - -
30. plscr3b ENSDARG00000069432 8500 1.678 - 0.926 - - 0.752 - - - - phospholipid scramblase 3b [Source:ZFIN;Acc:ZDB-GENE-040426-2517]
31. nfe2l3 ENSDARG00000019810 3682 1.676 - 0.906 - 0.770 - - - - - nuclear factor, erythroid 2-like 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2334]
32. ywhaba ENSDARG00000013078 42000 1.675 - 0.944 - 0.731 - - - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide a [Source:ZFIN;Acc:ZDB-GENE-030131-6583]
33. h2afva ENSDARG00000068820 16427 1.66 - - - 0.870 - 0.790 - - - H2A histone family, member Va [Source:ZFIN;Acc:ZDB-GENE-020717-1]
34. hdac1 ENSDARG00000015427 19804 1.647 - - 0.798 - - - - 0.849 - histone deacetylase 1 [Source:ZFIN;Acc:ZDB-GENE-020419-32]
35. cnot6 cnot6 7029 1.642 - 0.924 - 0.718 - - - - -
36. hmga1a ENSDARG00000028335 254077 1.641 - - - 0.770 - - - 0.871 - high mobility group AT-hook 1a [Source:ZFIN;Acc:ZDB-GENE-010502-1]
37. id2a ENSDARG00000055283 7428 1.636 - - - - - - 0.821 0.815 - inhibitor of DNA binding 2a [Source:ZFIN;Acc:ZDB-GENE-020910-1]
38. setbp1 ENSDARG00000093799 4499 1.634 - - - 0.779 - - 0.855 - - SET binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-060526-72]
39. CORO1C CORO1C 5554 1.631 - - - - - - 0.848 0.783 -
40. zgc:101846 15202 1.625 - - - - 0.724 - 0.901 - - zgc:101846
41. marcksl1b ENSDARG00000035715 37390 1.624 - - - 0.840 - - - 0.784 - MARCKS-like 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2315]
42. eif3s10 ENSDARG00000076815 10822 1.616 - - - - - - 0.852 0.764 - eukaryotic translation initiation factor 3, subunit 10 (theta) [Source:ZFIN;Acc:ZDB-GENE-030131-5726]
43. fth1a ENSDARG00000015551 48001 1.608 - - - - 0.740 - 0.868 - - ferritin, heavy polypeptide 1a [Source:ZFIN;Acc:ZDB-GENE-000831-2]
44. smarca4 smarca4 9726 1.604 - - - 0.864 - 0.740 - - -
45. ube2e1 ENSDARG00000116649 10656 1.599 - - - 0.811 0.788 - - - - ubiquitin-conjugating enzyme E2E 1 [Source:ZFIN;Acc:ZDB-GENE-071004-16]
46. npm1a ENSDARG00000014329, ENSDARG00000113199 31910 1.592 - 0.828 - - - - - 0.764 - nucleophosmin 1a [Source:ZFIN;Acc:ZDB-GENE-021028-1]
47. puf60a ENSDARG00000032175 5618 1.592 - - - 0.749 - 0.843 - - - poly-U binding splicing factor a [Source:ZFIN;Acc:ZDB-GENE-030131-2891]
48. snrpd3l ENSDARG00000076283 7655 1.59 - - - 0.802 - 0.788 - - - small nuclear ribonucleoprotein D3 polypeptide, like [Source:ZFIN;Acc:ZDB-GENE-030131-5219]
49. srsf7a ENSDARG00000035325, ENSDARG00000110705 11788 1.582 - - 0.747 - 0.835 - - - - serine/arginine-rich splicing factor 7a [Source:ZFIN;Acc:ZDB-GENE-040426-1798]
50. dhx15 ENSDARG00000015392 7496 1.579 - - - - - 0.722 0.857 - - DEAH (Asp-Glu-Ala-His) box helicase 15 [Source:ZFIN;Acc:ZDB-GENE-030131-650]
51. wu:fk48d07 wu:fk48d07 13245 1.578 - - 0.713 - - - 0.865 - -
52. srsf5a ENSDARG00000029818 15600 1.575 - - - 0.769 - 0.806 - - - serine/arginine-rich splicing factor 5a [Source:ZFIN;Acc:ZDB-GENE-030131-7336]
53. rbb4 rbb4 15541 1.572 - - 0.739 - - 0.833 - - -
54. LIG1 ENSDARG00000060041, ENSDARG00000110159, ENSDARG00000113788 8110 1.572 - - - 0.832 - 0.740 - - - ligase I, DNA, ATP-dependent [Source:ZFIN;Acc:ZDB-GENE-110404-2]
55. ssbp4 ENSDARG00000056483 10196 1.569 - - - 0.812 - 0.757 - - - single stranded DNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-469]
56. kpnb1 ENSDARG00000104889 9282 1.567 - - - 0.799 0.768 - - - - karyopherin (importin) beta 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2579]
57. cdca7a ENSDARG00000077620 9345 1.564 - - - 0.737 - - 0.827 - - cell division cycle associated 7a [Source:ZFIN;Acc:ZDB-GENE-050417-29]
58. aars ENSDARG00000069142, ENSDARG00000113882 10348 1.561 - 0.855 - - - 0.706 - - - alanyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-3663]
59. ubc ENSDARG00000102632 36050 1.559 - - - - 0.851 0.708 - - - ubiquitin C [Source:ZFIN;Acc:ZDB-GENE-061110-88]
60. atrx ENSDARG00000042236, ENSDARG00000112921, ENSDARG00000116878 7922 1.556 - - - 0.812 - 0.744 - - - alpha thalassemia/mental retardation syndrome X-linked homolog (human) [Source:ZFIN;Acc:ZDB-GENE-030912-11]
61. eif3ba ENSDARG00000059654 22960 1.553 - - - - - 0.723 0.830 - - eukaryotic translation initiation factor 3, subunit Ba [Source:ZFIN;Acc:ZDB-GENE-030131-2748]
62. sox2 ENSDARG00000070913 2763 1.552 - - - 0.850 - - - 0.702 - SRY (sex determining region Y)-box 2 [Source:ZFIN;Acc:ZDB-GENE-030909-1]
63. hnrnpm ENSDARG00000061735 19428 1.551 - - - 0.828 - - - 0.723 - heterogeneous nuclear ribonucleoprotein M [Source:ZFIN;Acc:ZDB-GENE-030131-6898]
64. nono ENSDARG00000020482, ENSDARG00000115783 12482 1.548 - - - 0.725 - - 0.823 - - non-POU domain containing, octamer-binding [Source:ZFIN;Acc:ZDB-GENE-030131-713]
65. whsc1l1 8544 1.539 - - - 0.768 - 0.771 - - - Wolf-Hirschhorn syndrome candidate 1-like 1, transcript variant X2
66. chd7 ENSDARG00000075211 12085 1.524 - - - 0.816 - 0.708 - - - chromodomain helicase DNA binding protein 7 [Source:ZFIN;Acc:ZDB-GENE-070912-179]
67. banf1 ENSDARG00000037009 16466 1.52 - - - - - 0.720 0.800 - - barrier to autointegration factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6657]
68. usp7 ENSDARG00000073710 7017 1.518 - - - 0.720 - 0.798 - - - ubiquitin specific peptidase 7 (herpes virus-associated) [Source:ZFIN;Acc:ZDB-GENE-030131-3656]
69. smarcb1b ENSDARG00000011594 2413 1.516 - - - 0.799 - 0.717 - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1b [Source:ZFIN;Acc:ZDB-GENE-991008-16]
70. lypla2 ENSDARG00000053656 8971 1.51 - - - - - 0.799 - 0.711 - lysophospholipase II [Source:ZFIN;Acc:ZDB-GENE-040426-1715]
71. khsrp ENSDARG00000026489 15738 1.508 - - 0.750 - - - - 0.758 - KH-type splicing regulatory protein [Source:ZFIN;Acc:ZDB-GENE-030131-4357]
72. si:ch73-18b11.1 si:ch73-18b11.1 3840 1.502 - - - 0.708 - - 0.794 - -
73. ppm1g ENSDARG00000075559 6516 1.499 - - - 0.797 - - - 0.702 - protein phosphatase, Mg2+/Mn2+ dependent, 1G [Source:ZFIN;Acc:ZDB-GENE-030425-4]
74. srsf4 ENSDARG00000105293 9657 1.497 - - - 0.777 - 0.720 - - - serine/arginine-rich splicing factor 4 [Source:ZFIN;Acc:ZDB-GENE-030131-591]
75. eif3ja ENSDARG00000012603 6324 1.496 - - - 0.789 - 0.707 - - - eukaryotic translation initiation factor 3, subunit Ja [Source:ZFIN;Acc:ZDB-GENE-040426-1266]
76. bzw1a ENSDARG00000010481 28451 1.494 - - - - 0.756 - - 0.738 - basic leucine zipper and W2 domains 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3951]
77. carm1 ENSDARG00000018698 5599 1.494 - - - 0.743 - - - 0.751 - coactivator-associated arginine methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040724-77]
78. tmpob ENSDARG00000022978 8121 1.494 - - - 0.790 - - - 0.704 - thymopoietin b [Source:ZFIN;Acc:ZDB-GENE-050522-8]
79. morf4l1 ENSDARG00000041155, ENSDARG00000111898, ENSDARG00000111981 4044 1.491 - - 0.716 0.775 - - - - - mortality factor 4 like 1 [Source:ZFIN;Acc:ZDB-GENE-040718-348]
80. lfng ENSDARG00000037879 11783 1.49 - - - 0.771 0.719 - - - - LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:ZFIN;Acc:ZDB-GENE-980605-16]
81. tgif1 ENSDARG00000059337 4020 1.486 - - - 0.782 - 0.704 - - - TGFB-induced factor homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-030131-475]
82. sumo3a ENSDARG00000028119 13447 1.477 - - - 0.774 - - - 0.703 - small ubiquitin-like modifier 3a [Source:ZFIN;Acc:ZDB-GENE-040426-2133]
83. sltm ENSDARG00000052728 6234 1.477 - - - 0.736 - 0.741 - - - SAFB-like, transcription modulator [Source:ZFIN;Acc:ZDB-GENE-040426-2647]
84. tia1 ENSDARG00000052536, ENSDARG00000114478 4392 1.475 - - 0.717 0.758 - - - - - TIA1 cytotoxic granule-associated RNA binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-1506]
85. nfya ENSDARG00000042004, ENSDARG00000114231 6606 1.463 - - 0.731 - 0.732 - - - - nuclear transcription factor Y, alpha [Source:ZFIN;Acc:ZDB-GENE-010501-1]
86. gnaia ENSDARG00000044760, ENSDARG00000109225 2062 1.462 - - - 0.745 - 0.717 - - - guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide a [Source:ZFIN;Acc:ZDB-GENE-030131-2229]
87. smarca5 ENSDARG00000052348 15433 1.436 - - - - 0.727 0.709 - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 [Source:ZFIN;Acc:ZDB-GENE-021125-1]
88. irx5a ENSDARG00000034043 1694 1.42 - - - 0.712 0.708 - - - - iroquois homeobox 5a [Source:ZFIN;Acc:ZDB-GENE-010716-2]
89. srrm1 ENSDARG00000001244 4972 1.412 - - - 0.702 - 0.710 - - - serine/arginine repetitive matrix 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2789]
90. klc2 3058 1.409 - - - - 0.704 0.705 - - - kinesin light chain 2
91. eif5a2 ENSDARG00000056186 43804 0.992 - - - - - - - - 0.992 eukaryotic translation initiation factor 5A2 [Source:ZFIN;Acc:ZDB-GENE-040426-2405]
92. srsf3a ENSDARG00000025397, ENSDARG00000100815 11622 0.988 - - - - - - - - 0.988 serine/arginine-rich splicing factor 3a [Source:ZFIN;Acc:ZDB-GENE-030616-631]
93. mapk6 ENSDARG00000032103 6422 0.986 - - - - - - - - 0.986 mitogen-activated protein kinase 6 [Source:ZFIN;Acc:ZDB-GENE-050420-7]
94. onecut1 ENSDARG00000007982, ENSDARG00000112251 6307 0.986 - - - - - - - - 0.986 one cut homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1469]
95. rpl17 ENSDARG00000057556 60281 0.984 - - - - - - - - 0.984 ribosomal protein L17 [Source:ZFIN;Acc:ZDB-GENE-030131-8585]
96. fus ENSDARG00000037968, ENSDARG00000113554, ENSDARG00000114284 4319 0.983 - - - - - - - - 0.983 FUS RNA binding protein [Source:ZFIN;Acc:ZDB-GENE-040426-1010]
97. vbp1 ENSDARG00000030241 10619 0.983 - - - - - - - - 0.983 von Hippel-Lindau binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050522-494]
98. NDUFB2 ENSDARG00000045490 9141 0.982 - - - - - - - - 0.982 NADH:ubiquinone oxidoreductase subunit B2 [Source:ZFIN;Acc:ZDB-GENE-040426-1762]
99. DST ENSDARG00000101858 4395 0.982 - - - - - - - - 0.982 dystonin [Source:HGNC Symbol;Acc:HGNC:1090]
100. BX000999.2 BX000999.2 2353 0.981 - - - - - - - - 0.981

There are 689 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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